KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:20:39 2014 Check: 00 ..
Name: ENSP00000465734/1-539 Len: 609 Check: 3668 Weight: 1.00
Name: ENSBTAP00000003345/1-401 Len: 609 Check: 1132 Weight: 1.00
Name: bmy_14084T0/1-463 Len: 609 Check: 9603 Weight: 1.00
Name: ENSTTRP00000011202/1-609 Len: 609 Check: 9264 Weight: 1.00
Name: BACU013001/1-389 Len: 609 Check: 5463 Weight: 1.00
//
1 50
ENSP00000465734/1-539 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000003345/1-401 ---------- ---------- ---------- ---------- ----------
bmy_14084T0/1-463 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000011202/1-609 MGRGGGGMGG GGEGSRDCLS RDRLASWGAE PGGGGSSSSA WSSSSRNKYQ
BACU013001/1-389 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000465734/1-539 ---------- ------MALQ SQASEEAKGP WQEADQEQQE PVGSPEPESE
ENSBTAP00000003345/1-401 ---------- ---------- ---------- ---------- ----------
bmy_14084T0/1-463 -------MAT DDNSISQLRR KIGEGIVEAP WASSTRGK-- ----------
ENSTTRP00000011202/1-609 PHSGSSGPRS HSPPAAMALQ SPASEEAKGP WREADQEQQE RVGSPEPEPE
BACU013001/1-389 ---------- ---------- ---------- ---------- ----------
101 150
ENSP00000465734/1-539 PEPEPEPEPV PVPP----PE PQPEPQPLPD PAPLPELEFE SERVHEPEPT
ENSBTAP00000003345/1-401 ---------- ---------- ---------- ---------- ----------
bmy_14084T0/1-463 ---------- ---------- ---------- -NPMQLLPF- ----------
ENSTTRP00000011202/1-609 PEPEPEPEPV PVPPPEPQPE PQPEPQPLPD PAPLPELEFE PEPVREPEPT
BACU013001/1-389 ---------- ---------- ---------- ---------- ----------
151 200
ENSP00000465734/1-539 PTVETRGTAR GFQPPEGGFG WVVVFAATWC NGSIFGIHNS VGILYSMLLE
ENSBTAP00000003345/1-401 ---------- ---------- ---------- ---------- ----------
bmy_14084T0/1-463 ---------L GGRVLGSGTI WDAGLLQIWS S--------- ----------
ENSTTRP00000011202/1-609 PTVETRGTAR GFQPPEGGFG WMVVFAATWC NGSIFGIQNS FGILYSMLLQ
BACU013001/1-389 ---------- ---------- ---------- ---------- ----------
201 250
ENSP00000465734/1-539 EEKEKNRQVE FQAAWVGALA MGMIFFCSPI VSIFTDRLGC RITATAGAAV
ENSBTAP00000003345/1-401 --------LL FSAAWVGALS MGMIFFCSPI VSIFTDRLGC RITATAGAAV
bmy_14084T0/1-463 -------VLD TVDAWVGALS MGMIFFCSPI VSIFTDRLGC RITATAGAAV
ENSTTRP00000011202/1-609 EEREKNRQVE FQAAWVGALS MGMIFFCSPI VSIFTDRLGC RITATAGAAV
BACU013001/1-389 ---------- ---------- MGMIFFCSPI VSIFTDRLGC RITATAGAAV
251 300
ENSP00000465734/1-539 AFIGLHTSSF TSSLSLRYFT YGILFGCGCS FAFQPSLVIL GHYFQRRLGL
ENSBTAP00000003345/1-401 AFIGLHTSSF TSSLSLRYFT YGILFGCGCS FAFQPSLVIL GHYFQRRLGL
bmy_14084T0/1-463 AFIGLHTSSF TSSLSLRYFT YGILFGCGCS FAFQPSLVIL GHYFQRRLGL
ENSTTRP00000011202/1-609 AFIGLHTSSF TSSLSLRYFT YGILFGCGCS FAFQPSLVIL GHYFQRRLGL
BACU013001/1-389 AFIGLHTSSF TSSLSLRYFT YGILFGCGCS FAFQPSLVIL GHYFQRRLGL
301 350
ENSP00000465734/1-539 ANGVVSAGSS IFSMSFPFLI RMLGDKIKLA QTFQVLSTFM FVLMLLSLTY
ENSBTAP00000003345/1-401 ANGVVSAGSS IFSISFPLLI KTLGAKIKLA QTFQVLSTFM FILTLLSLTY
bmy_14084T0/1-463 ANGVVSAGSS IFSISFPLLI KTLGAKIKLA QTFQVLSTFM FILTLLSLTY
ENSTTRP00000011202/1-609 ANGVVSAGSS IFSISFPLLI KTLGAKIKLA QTFQVLSTFM FILTLLSLTY
BACU013001/1-389 ANGVVSAGSS IFSISFPLLI KTLGAKIKLA QTFQVLSTFM FILTLLSLTY
351 400
ENSP00000465734/1-539 RPLLPSSQDT PSKRGVRTLH QRFLAQLRKY FNMRVFRQRT YRIWAFGIAA
ENSBTAP00000003345/1-401 RPLLPSSQDT PSKRGVHTLC QRFLAQLRKY FNMRVFRQRT YRIWAFGIAA
bmy_14084T0/1-463 RPLLPSSQDT PSKRGVHTLC QRFLAQLRKY FNMRVFRQRT YRIWAFGIAA
ENSTTRP00000011202/1-609 RPLLPSSQDT PSKRGVHTLC QRFLAQLRKY FNMRVFRQRT YRIWAFGIAA
BACU013001/1-389 RPLLPSSQDT PSKRGVHTLC QRFLAQLRKY FNMRVFRQRT YRIWAFGIAA
401 450
ENSP00000465734/1-539 AALGYFVPYV HLMKYVEEEF SEIKETWVLL VCIGATSGLG RLVSGHISDS
ENSBTAP00000003345/1-401 AALGYFVPYV HLMKYVEEEF LEIKQTWVLL VCIGATSGLG RLVSGRVSDS
bmy_14084T0/1-463 AALGYFVPYV HLMKYVEEEF LEIKQTWVLL VCIGATSGLG RLVSGRVSDS
ENSTTRP00000011202/1-609 AALGYFVPYV HLMKYVEEEF LEIKQTWVLL VCIGATSGLG RLVSGRVSDS
BACU013001/1-389 AALGYFVPYV HLMKYVEEEF LEIKQTWVLL VCIGATSGLG RLVSGRVSDS
451 500
ENSP00000465734/1-539 IPGLKKIYLQ VLSFLLLGLM SMMIPLCRDF GGLIVVCLFL GLCDGFFITI
ENSBTAP00000003345/1-401 IPGLKKIYLQ VISFLLLGLM SMMIPLCRGF GGLIVVCLFL GLCDGFFITI
bmy_14084T0/1-463 IPGLKKIYLQ VISFLLLGLM SMMIPLCRGF GGLIVVCLFL GLCDGFFITI
ENSTTRP00000011202/1-609 IPGLKKIYLQ VISFLLLGLM SMMIPLCRGF GGLIVVCLFL GLCDGFFITI
BACU013001/1-389 IPGLKKIYLQ VISFLLLGLM SMMIPLCRGF GGLIVVCLFL GLCDGFFITI
501 550
ENSP00000465734/1-539 MAPIAFELVG PMQASQAIGY LLGMMALPMI AGPPIAGLLR NCFGDYHVAF
ENSBTAP00000003345/1-401 MAPIAFELVG PMQASQAIGY LLGMMALPMI AGPPIAGLLR NCFGDYHVAF
bmy_14084T0/1-463 MAPIAFELVG PMQASQAIGY LLGMMALPMI AGPPIAGLLR NCFGDYHVAF
ENSTTRP00000011202/1-609 MAPIAFELVG PMQASQAIGY LLGMMALPMI AGPPIAGLLR NCFGDYHVAF
BACU013001/1-389 MAPIAFELVG PMQASQAIGY LLGMMALPMI AGPPIAGLLR NCFGDYHVAF
551 600
ENSP00000465734/1-539 YFAGVPPIIG AVILFFVPLM HQRMFKKEQR DSSKDKMLAP DPDPNGELLP
ENSBTAP00000003345/1-401 YFAGVPPIVG AVILLFVPLM HQRMFKKEQR DSSKDKMLTP DPDPNGELLP
bmy_14084T0/1-463 YFAGVPPIVG AVILLFVPLM HQRMFKKEQR DSSKDKMLTP DPDPNGELLP
ENSTTRP00000011202/1-609 YFAGVPPIVG AVILLFVPLM HQRMFKKEQR DSSKDKMLTP DPDPNGELLP
BACU013001/1-389 YFAGVPPIVG AVILLFVPLM HQRMFKKEQR DSSKDKMLTP DPDPNGELLP
601 650
ENSP00000465734/1-539 GSPNPEEPI
ENSBTAP00000003345/1-401 GSSTPEEPI
bmy_14084T0/1-463 GSPTPEEPI
ENSTTRP00000011202/1-609 GSPTPEEPI
BACU013001/1-389 GSPTPEEPI