KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:20:41 2014  Check: 00 ..

 Name: bmy_08293T0/1-223         Len:    223  Check:  2588  Weight:  1.00
 Name: ENSBTAP00000003355/1-169  Len:    223  Check:  544  Weight:  1.00
 Name: ENSP00000315263/1-209     Len:    223  Check:  2854  Weight:  1.00
 Name: ENSTTRP00000004797/1-209  Len:    223  Check:  4059  Weight:  1.00

//


                          1                                                   50
bmy_08293T0/1-223         MRSVGTRTEA PAWPADKGKL ALVFPHRGFG THLWPAWASL PPGLCIEDDC 
ENSBTAP00000003355/1-169  MALLAEHLLR PL-PADK--- -----QIETG PFL-EAVSHL PPFF----DC 
ENSP00000315263/1-209     MALLAEHLLK PL-PADK--- -----QIETG PFL-EAVSHL PPFF----DC 
ENSTTRP00000004797/1-209  MALLAEHLLK PL-PADK--- -----QIETG PFL-EAVSHL PPFF----DC 


                          51                                                 100
bmy_08293T0/1-223         LGSPVFTPIK LDISGNITKI KAVYDNNPAK FRTLQNILEV EKEMYGAEWP 
ENSBTAP00000003355/1-169  LGSPVFTPIK ADISGNITKI KAVYDTNPTK FRTLQNILEV EKEMYGAEWP 
ENSP00000315263/1-209     LGSPVFTPIK ADISGNITKI KAVYDTNPAK FRTLQNILEV EKEMYGAEWP 
ENSTTRP00000004797/1-209  LGSPVFTPIK VDISGNITKI KAVYDTDPAK FRTLQNILEV EKEMYGAEWP 


                          101                                                150
bmy_08293T0/1-223         KVGATLALMW LKRGLRFIQV FLQSICDGER DENHPNLVRV NATKAYEMAL 
ENSBTAP00000003355/1-169  KVGATLALMW LKRGLRFIQV FLQSICDGER DENHPNLIRV NATKAYEMAL 
ENSP00000315263/1-209     KVGATLALMW LKRGLRFIQV FLQSICDGER DENHPNLIRV NATKAYEMAL 
ENSTTRP00000004797/1-209  KVGATLALMW LKRGLRFIQV FLQSICDGER DENHPSLVRV NATKAYEMAL 


                          151                                                200
bmy_08293T0/1-223         KKYHGWIVQK IFQAALYAAP YKSDLLKALS KGQNVTEEEC LEKTRLFLVN 
ENSBTAP00000003355/1-169  KKYHGWIVQK IFQRCTRP-P ISPTSSKRSP RART------ ---------- 
ENSP00000315263/1-209     KKYHGWIVQK IFQAALYAAP YKSDFLKALS KGQNVTEEEC LEKIRLFLVN 
ENSTTRP00000004797/1-209  KKYHGWIVQK IFQAALYAAP YKSDLLKALS KGQNVTEEEC LEKIRLFLVN 


                          201                                                250
bmy_08293T0/1-223         YTATIDVIYE MYTKMNAELN YKV 
ENSBTAP00000003355/1-169  ---------- ---------- --- 
ENSP00000315263/1-209     YTATIDVIYE MYTQMNAELN YKV 
ENSTTRP00000004797/1-209  YTATIDVIYE MYTKMNAELN YKV