KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:43 2014 Check: 00 .. Name: ENSP00000368516/1-951 Len: 1034 Check: 8499 Weight: 1.00 Name: ENSBTAP00000003370/1-1034 Len: 1034 Check: 1394 Weight: 1.00 Name: ENSTTRP00000012827/1-908 Len: 1034 Check: 6737 Weight: 1.00 Name: bmy_06784T0/1-787 Len: 1034 Check: 6668 Weight: 1.00 Name: BACU008857/1-886 Len: 1034 Check: 3625 Weight: 1.00 // 1 50 ENSP00000368516/1-951 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003370/1-1034 PREDLGLPLR FHGAAGRAKL RSAAFLRCCR GLLKEPSPRA ERGEPPAQPA ENSTTRP00000012827/1-908 ---------- ---------- ---------- ---------- ---------- bmy_06784T0/1-787 ---------- ---------- ---------- ---------- ---------- BACU008857/1-886 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000368516/1-951 ---------- ---------- ---------- ---MPGPLGL LCFLALGLLG ENSBTAP00000003370/1-1034 GLPPRAAGGV GGRRRRAERA APRERPARVA AAAMPGPLGL LCFLALGLRG ENSTTRP00000012827/1-908 ---------- ---------- ---------- ---------- ---------- bmy_06784T0/1-787 ---------- ---------- ---------- ---------- ---------- BACU008857/1-886 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000368516/1-951 SAGPSGAAPP LCAAPCSCDG DRRVDCSGKG LTAVPEGLSA FTQALDISMN ENSBTAP00000003370/1-1034 SAEPSGAAPP LCAAPCSCDG DRRVDCSGKG LTAVPEGLSA FTQLLDISMN ENSTTRP00000012827/1-908 ---------- ---------- ------SGRG LTAVPEGLSA FTQALDISMN bmy_06784T0/1-787 ---------- ---------- ---------- ---------- ---------- BACU008857/1-886 ---------- ---------- ---------- ---------- --------MN 151 200 ENSP00000368516/1-951 NITQLPEDAF KNFPFLEELQ LAGNDLSFIH PKALSGLKEL KVLTLQNNQL ENSBTAP00000003370/1-1034 NITQLPEDAF KNFPFLEELR LAGNDLSFIH PKALSGLKEL KVLTLQNNQL ENSTTRP00000012827/1-908 NITQLPEDAF KNFPFLEELR LAGNDLSFIH PKALSGLKEL KVLTLQNNQL bmy_06784T0/1-787 ---------- ---------R LAGNDLSFIH PKALSGLKEL KVLTLQNNQL BACU008857/1-886 NITQLPEDAF KNFPFLEELR LAGNDLSFIH PKALSGLKEL KVLTLQNNQL 201 250 ENSP00000368516/1-951 KTVPSEAIRG LSALQSLRLD ANHITSVPED SFEGLVQLRH LWLDDNSLTE ENSBTAP00000003370/1-1034 KTVPSEAIRG LSSLQSLRLD ANHITSVPED SFEGLTQLRH LWLDDNSLTE ENSTTRP00000012827/1-908 KTVPSEAIRG LSALQSLRLD ANHITAVPED SFEGLTQLRH LWLDDNSLTE bmy_06784T0/1-787 KTVPSEAIRG LSALQS---- ---------- ---------- ---------- BACU008857/1-886 KTVPSEAIRG LSALQSLRLD ANHITAVPED SFEGLTQLRH LWLDDNSLTE 251 300 ENSP00000368516/1-951 VPVHPLSNLP TLQALTLALN KISSIPDFAF TNLSSLVVLH LHNNKIRSLS ENSBTAP00000003370/1-1034 VPVHPLSNLP TLQALTLALN KISSIPDFAF TNLSSLVVLH LHNNKIKSLG ENSTTRP00000012827/1-908 VPVHPLSNLP TLQALTLALN KISSIPDFAF TNLSSLVVLH LHNNKIKSLG bmy_06784T0/1-787 ---------- ---------- ---------- --------LH LHNNKIKSLG BACU008857/1-886 VPVHPLSNLP TLQALTLALN KISSIPDFAF TNLSSLVVLH LHNNKIKSLG 301 350 ENSP00000368516/1-951 QHCFDGLDNL ETLDLNYNNL GEFPQAIKAL PSLKELGFHS NSISVIPDGA ENSBTAP00000003370/1-1034 QHCFDGLDNL ETLDLNYNNL GEFPQAIKAL PSLKELLFHS NSISVIPDGA ENSTTRP00000012827/1-908 QHCFEGLDNL ETLDLNYNNL GEFPQAIKAL PSLKELLFHS NSISVIPDGA bmy_06784T0/1-787 QRCFDGLDNL ETLDLNYNNL GEFPQAIKAL PSLKELLFHS NSISVIPDGA BACU008857/1-886 QRCFDGLDNL ETLDLNYNNL GEFPQAIKAL PSLKELLFHS NSISIIPDGA 351 400 ENSP00000368516/1-951 FDGNPLLRTI HLYDNPLSFV GNSAFHNLSD LHSLVIRGAS MVQQFPNLTG ENSBTAP00000003370/1-1034 FDGNPLLKTI HLYDNPLSFV GNSAFHNLSE LHSLVIRGAS MVQRFPNLTG ENSTTRP00000012827/1-908 FDGNPLLRTI HLYDNPLSFV GNSAFHNLSD LHSLVIRGAS MVQRFPNLTG bmy_06784T0/1-787 FDGNPLLRTI HLYDNPLSFV GNSAFHNLSD LHSLVIRGAS MVQRFPNLTG BACU008857/1-886 FDGNPLLRTI HLYDNPLSFV GNSAFHNLSD LHSLVIRGAS MVQQFPNLTG 401 450 ENSP00000368516/1-951 TVHLESLTLT GTKISSIPNN LCQEQKMLRT LDLSYNNIRD LPSFNGCHAL ENSBTAP00000003370/1-1034 TVRLESLTLT GTKISSISNN LCQEQKRLRT LDLSYNSIKD LPSFNGCHAL ENSTTRP00000012827/1-908 TAHLESLTLT GTKISSISSN LCQEQKMLRT LDLSYNNIKD LPSFNGCHAL bmy_06784T0/1-787 TVHLESLTLT GTKISSISSN LCQEQKMLRT LDLSYNNIKD LPSFNGCHAL BACU008857/1-886 TVHLESLTLT GTKISSISSN LCQEQKMLRT LDLSYNDIKD LPSFNGCHAL 451 500 ENSP00000368516/1-951 EEISLQRNQI YQIKEGTFQG LISLRILDLS RNLIHEIHSR AFATLGPITN ENSBTAP00000003370/1-1034 EEISLQRNQI HQIKEDTFQG LTSLKILDLS RNLIHEIDDR AFAKLGSITN ENSTTRP00000012827/1-908 EEISLQRNQI HQIKEDTFQG LTSLRILDLS RNLIHEIHDR AFAKLGSITN bmy_06784T0/1-787 EEISLQHNQI HQIKEDTFQG LTSLRILDLS RNLIHEIHDR AFAKLGSITN BACU008857/1-886 EEISLQRNQI HQIKEDTFQG LTSLRILDLS RNLIHEIHDR AFAKLGSITN 501 550 ENSP00000368516/1-951 LDVSFNELTS FPTEGLNGLN QLKLVGNFKL KEALAAKDFV NLRSLSVPYA ENSBTAP00000003370/1-1034 LDVSFNELTS FPTEGLNGLN QLKLVGNFKL KEALAAKDFV NLRSLSVPYA ENSTTRP00000012827/1-908 LDISFNELTS FPTEGLNGLN QLKLVGNFKL KEALAAKDFV NLRSLSVPYA bmy_06784T0/1-787 LDISFNELTS FPTEGLNGLN QLKLGGNFKL KEALAAKDFV NLRSLSVPYA BACU008857/1-886 LDISFNELTS FPTEGLNGLN QLKLVGNFKL KEALAAKDFV NLRSLSVPYA 551 600 ENSP00000368516/1-951 YQCCAFWGCD SYANLNTEDN SLQDHSVAQE KGTADAANVT STLENEEHSQ ENSBTAP00000003370/1-1034 YQCCAFWGCD SYTHSNTEDN SLQDHSGSKD KGLSDVAGVT SSAENEEHSQ ENSTTRP00000012827/1-908 YQCCAFWGCD SYAHSSTEDN SLQDHSVAKD KGPTDLAVVT SSAEKEEHSQ bmy_06784T0/1-787 YQCCAFWGCD SYAHSNTEDN SLQDHS---- --PTDLAVVT SSAENEEHSQ BACU008857/1-886 YQCCAFWGCD SYAHSNTEDN SLQDHSVAKD KGPTDLAVVT SSAENEEHSQ 601 650 ENSP00000368516/1-951 IIIHCTPSTG AFKPCEYLLG SWMIRLTVWF IFLVALFFNL LVILTTFASC ENSBTAP00000003370/1-1034 IIIHCTPSTG AFKPCEYLLG SWMIRLTVWF IFLVALFFNL LVILTTFASC ENSTTRP00000012827/1-908 IIIHCTPSTG AFKPCEHLLG SWMIRLTVWF IFLVALLFNL LVILTTFASC bmy_06784T0/1-787 IIIHCTPSTG AFKPCEHLLG SWMIRLTVWF IFLVALFFNL LVILTTFASC BACU008857/1-886 IIIHCTPSTG AFKPCEHLLG SWMIRLTVWF IFLVALFFNL LVILTTFASC 651 700 ENSP00000368516/1-951 TSLPSSKLFI GLISVSNLFM GIYTGILTFL DAVSWGRFAE FGIWWETGSG ENSBTAP00000003370/1-1034 TSVPSSKLFI GLISVSNLFM GAYTGILTFL DAVSWGRFAE FGIWWEIGSG ENSTTRP00000012827/1-908 TSXXXXXXXX XXISISNLFM GAYTGILTFL DAVSWGRFAE FGIWWEIGSG bmy_06784T0/1-787 TSLPSSKLFI GLISVSNLFM GAYTGILTFL DAVSWGRFAE FGIWWEIGSG BACU008857/1-886 TSLPSSKLFI GLISVSNLFM GAYTGILTFL DAVSWGRFAE FGIWWEIGSG 701 750 ENSP00000368516/1-951 CKVAGFLAVF SSESAIFLLM LATVERSLSA KDIMKNGKSN HLKQFRVAAL ENSBTAP00000003370/1-1034 CKIAGFLAVF SSESAIFLLM LAAVERSLSA KDMMKNGKSN HLRQFRIAAL ENSTTRP00000012827/1-908 CKIAGFLAVF SSESAIFLLM LAAIERSLSA KDIMKNGKSN HLRQFRIAAL bmy_06784T0/1-787 CKIAGFLAVF SSESAIFLLM LAAVERSFSA KDIMKNGKSN HLRQFRIAAL BACU008857/1-886 CKIAGFLAVF SSESAIFLLM LAAVERSLSA KDIMKNGKSN HLRQFRIAAL 751 800 ENSP00000368516/1-951 LAFLGATVAG CFPLFHRGEY SASPLCLPFP TGETPSLGFT VTLVLLNSLA ENSBTAP00000003370/1-1034 LAFLGAAVAG SFPLFHRGEY SASPLCLPFP TGETPSLGFT VTLVLLNSLA ENSTTRP00000012827/1-908 FALLGAAVAG CFPLFHGGEY SASPLCLPFP TGETPSLGFT VTLVLLNSLA bmy_06784T0/1-787 FALLGAAVAG CFPLFHRGEY SASPLCLPFP TGETPSLGFT VTLVLLNSLA BACU008857/1-886 FALLGAAVAG CFPLFHRGEY SASPLCLPFP TGETPSLGFT VTLVLLNSLA 801 850 ENSP00000368516/1-951 FLLMAVIYTK LYCNLEKEDL SENSQSSMIK HVAWLIFTNC IFFCPVAFFS ENSBTAP00000003370/1-1034 FLLMAIIYTK LYCNLEKEDL SESSQSSMIK HVAWLIFTNC IFFCPVAFFS ENSTTRP00000012827/1-908 FLLMAIIYTK LYCNLEKEDL SENSHSSMIK HVAWLIFTNC IFFCPVAFFS bmy_06784T0/1-787 FLLMAVIYTK LYCNLEKEDL SENSHSSMIK HVAWLIFTNC IFFCPVAFFS BACU008857/1-886 FLLMAIIYTK LYCNLEKEDL SENSHSSMIK HVAWLIFTNC IFFCPVAFFS 851 900 ENSP00000368516/1-951 FAPLITAISI SPEIMKSVTL IFFPLPACLN PVLYVFFNPK FKEDWKLLKR ENSBTAP00000003370/1-1034 FAPLITAVSI SPEIMKSVTL IFFPLPACLN PVLYVFFNPK FKEDWKLLKR ENSTTRP00000012827/1-908 FAPLITAISI SPEIMKSVTL IFFPLPACLN PVLYVFFNPK FKEDWKLLKR bmy_06784T0/1-787 FAPLITAISI SPEIMKSVTL IFFPLPACLN PVLYVFFNPK FKEDWKLLKR BACU008857/1-886 FAPLITAISI SPEIMKSVTL IFFPLPACLN PVLYVFFNPK FKEDWKLLKR 901 950 ENSP00000368516/1-951 RVTKKSGSVS VSISSQGGCL EQDFYYDCGM YSHLQGNLTV CDCCESFLLT ENSBTAP00000003370/1-1034 HVSKKSGSAS VSISSQAGCV EQDFYYDCGM YSHLQGNLTV CDCCEAFLLT ENSTTRP00000012827/1-908 HITKKNGSVS VSVSSQAGCV EQDFYYDCGM YSHLQGNLTV CDCCESFLLT bmy_06784T0/1-787 HITKKSGSVS VSISSQAGCV EQDFYYDCGM YSHLQGNLTV CDCCESFLLT BACU008857/1-886 HITKKSGSVS VSISSQAGCV EQDFYYDCGM YSHLQGNLTV CDCCESFLLT 951 1000 ENSP00000368516/1-951 KPVSCKHLIK SHSCPALAVA SCQRPEGYWS DCGTQSAHSD YADEEDSFVS ENSBTAP00000003370/1-1034 KPVSCKHLIK SHSCPALTVG SCQRPDGYWS DCGTQSAHSD YADEEDSFVS ENSTTRP00000012827/1-908 KPVSCKHLIK SHSCPALAVG SCQRPDGYWS DCGTQSAHSD YADEEDSFVS bmy_06784T0/1-787 KPVSCKHLIK SHSCPALAVG SCQRPDGYWS DCGTQSAHSD YADEEDSFVS BACU008857/1-886 KPVSCKHLIK SHSCPALAVG SCQRPDGYWS DCGTQSAHSD YADEEDSFVS 1001 1050 ENSP00000368516/1-951 DSSDQVQACG RACFYQSRGF PLVRYAYNLP RVKD ENSBTAP00000003370/1-1034 DSSDQVQACG RACFYQSRGF PLVRYAYNLP RVKD ENSTTRP00000012827/1-908 DSSDQVQACG RACFYQSRGF PLVRYAYNLP RVKD bmy_06784T0/1-787 DSSDQVQACG RACFYQSRGF PLVRYAYNLP RVKD BACU008857/1-886 DSSDQVQACG RACFYQSRGF PLVRYAYNLP RVKD