KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:44 2014 Check: 00 .. Name: ENSP00000216330/1-224 Len: 277 Check: 8212 Weight: 1.00 Name: ENSBTAP00000003377/1-224 Len: 277 Check: 7677 Weight: 1.00 Name: ENSTTRP00000006304/1-224 Len: 277 Check: 7936 Weight: 1.00 Name: bmy_20527T0/1-277 Len: 277 Check: 7349 Weight: 1.00 Name: BACU009361/1-224 Len: 277 Check: 7561 Weight: 1.00 // 1 50 ENSP00000216330/1-224 ---------- ---------- ---------- -MAAAVPQRA WTVEQLRSEQ ENSBTAP00000003377/1-224 ---------- ---------- ---------- -MAAAVPQRA WTVEQLRSEQ ENSTTRP00000006304/1-224 ---------- ---------- ---------- -MAAAVPQRA WTVEQLRSEQ bmy_20527T0/1-277 RAPSRVRATP LGRGDAEPRR AGSVKRRQRG KMAAVVPQRA WTVEQLRSEQ BACU009361/1-224 ---------- ---------- ---------- -MAAVVPQRA WTVEQLRSEQ 51 100 ENSP00000216330/1-224 LPKKDIIKFL QEHGSDSFLA EHKLLGNIKN VAKTANKDHL VTAYNHLFET ENSBTAP00000003377/1-224 LPKKDIIKFL QDHGSDSFLA EHKLLGNIKN VAKTANKDHL VTAYNHLFES ENSTTRP00000006304/1-224 LPKKDIIKFL QDHGSDSFLA EHKLLGNIKN VAKTANKDHL VTAYNHLFES bmy_20527T0/1-277 LPKKDIIKFL QDHGSDSFLA EHKLLGNIKN VAKTANKDHL VTAYNHLFES BACU009361/1-224 LPKKDIIKFL QDHGSDSFLA EHKLLGNIKN VAKTANKDHL VTAYNHLFES 101 150 ENSP00000216330/1-224 K--------- -----RFKGT ESISKVSEQV KNVKLNEDKP KETKSEETLD ENSBTAP00000003377/1-224 K--------- -----RFKGT ESISKVSEQV KNVKLNEDKP KETKSEETLD ENSTTRP00000006304/1-224 K--------- -----RFKGT ESISKVSEQV KNVKLNEDKP KETKSEETVD bmy_20527T0/1-277 KPDMNMINFR PFSLQRFKGT ESISKVSEQV KNVKLNEDKP KETKSEETLD BACU009361/1-224 K--------- -----RFKGT ESISKVSEQV KNVKLNEDKP KETKSEETLD 151 200 ENSP00000216330/1-224 EGPPKYTKSV LKKGDKTNFP KKGDVVHCWY TGTLQDGTVF DTNIQTS--- ENSBTAP00000003377/1-224 EGPPKYTKSV LKKGDKTNFP KKGDVVHCWY TGTLQDGTVF DTNIQTS--- ENSTTRP00000006304/1-224 EGPPKYTKSV LKKGDKTNFP KKGDIVHCWY TGTLQDGTVF DTNIQTS--- bmy_20527T0/1-277 EGPPKYTKSV LKKGDKTNFP KKGDIVHCWY TGTLQDGTVF DTNIQTSKSK BACU009361/1-224 EGPPKYTKSV LKKGDKTNFP KKGDIVHCWY TGTLQDGTVF DTNIQTS--- 201 250 ENSP00000216330/1-224 -----AKKKK NAKPLSFKVG VGKVIRGWDE ALLTMSKGEK ARLEIEPEWA ENSBTAP00000003377/1-224 -----SKKKK NAKPLSFKVG IGKVIRGWDE ALLTMSKGEK ARLEIEPEWA ENSTTRP00000006304/1-224 -----SKKKK NAKPLSFKVG IGKVIRGWDE ALLTMSKGEK ARLEIEPEWA bmy_20527T0/1-277 YAQHGSKKKK NAKPLSFKVG IGKVIRGWDE ALLTMSKGEK ARLEIEPEWA BACU009361/1-224 -----SKKKK NAKPLSFKVG IGKVIRGWDE ALLTMSKGEK ARLEIEPEWA 251 300 ENSP00000216330/1-224 YGKKGQPDAK IPPNAKLTFE VELVDID ENSBTAP00000003377/1-224 YGKKGQPDAK IPPNAKLIFE VELVDID ENSTTRP00000006304/1-224 YGKKGQPDAK IPPNAKLIFE VELVDID bmy_20527T0/1-277 YGKKGQPDAK IPPNAKLIFE VELVDID BACU009361/1-224 YGKKGQPDAK IPPNAKLIFE VELVDID