KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:48 2014 Check: 00 .. Name: bmy_00501T0/1-373 Len: 606 Check: 7877 Weight: 1.00 Name: ENSP00000358335/1-606 Len: 606 Check: 2436 Weight: 1.00 Name: BACU020325/1-606 Len: 606 Check: 2664 Weight: 1.00 Name: ENSTTRP00000014604/1-606 Len: 606 Check: 2664 Weight: 1.00 Name: ENSBTAP00000003401/1-579 Len: 606 Check: 6769 Weight: 1.00 // 1 50 bmy_00501T0/1-373 WLQCYELGCY ---------- ---------- -----LFLIL VVGRGAFGVV ENSP00000358335/1-606 MSTASAASSS SSSSAGEMIE APSQVLNFEE IDYKEIEVEE VVGRGAFGVV BACU020325/1-606 MSTASAASSS SSSSAGEMIE APSQVLNFEE IDYKEIEVEE VVGRGAFGVV ENSTTRP00000014604/1-606 MSTASAASSS SSSSAGEMIE APSQVLNFEE IDYKEIEVEE VVGRGAFGVV ENSBTAP00000003401/1-579 MSTASAASSS SSSSAGEMIE APSQVLNFEE IDYKEIEVEE VVGRGAFGVV 51 100 bmy_00501T0/1-373 CKAKWRAKDV AIKQIESESE RKAFIVELRQ LS-------- ---------- ENSP00000358335/1-606 CKAKWRAKDV AIKQIESESE RKAFIVELRQ LSRVNHPNIV KLYGACLNPV BACU020325/1-606 CKAKWRAKDV AIKQIESESE RKAFIVELRQ LSRVNHPNIV KLYGACLNPV ENSTTRP00000014604/1-606 CKAKWRAKDV AIKQIESESE RKAFIVELRQ LSRVNHPNIV KLYGACLNPV ENSBTAP00000003401/1-579 CKAKWRAKDV AIKQIESESE RKAFIVELRQ LSRVNHPNIV KLYGACLNPV 101 150 bmy_00501T0/1-373 ---------- ----LLHGAE PLPYYTAAHA MSWCLQCSQG VAYLHSMQPK ENSP00000358335/1-606 CLVMEYAEGG SLYNVLHGAE PLPYYTAAHA MSWCLQCSQG VAYLHSMQPK BACU020325/1-606 CLVMEYAEGG SLYNVLHGAE PLPYYTAAHA MSWCLQCSQG VAYLHSMQPK ENSTTRP00000014604/1-606 CLVMEYAEGG SLYNVLHGAE PLPYYTAAHA MSWCLQCSQG VAYLHSMQPK ENSBTAP00000003401/1-579 CLVMEYAEGG SLYNVLHGAE PLPYYTAAHA MSWCLQCSQG VAYLHSMQPK 151 200 bmy_00501T0/1-373 ALIHRDLKPP NLLLVAGGTV LKICDFGTAC DIQTHMTNNK GSAAWMAPEV ENSP00000358335/1-606 ALIHRDLKPP NLLLVAGGTV LKICDFGTAC DIQTHMTNNK GSAAWMAPEV BACU020325/1-606 ALIHRDLKPP NLLLVAGGTV LKICDFGTAC DIQTHMTNNK GSAAWMAPEV ENSTTRP00000014604/1-606 ALIHRDLKPP NLLLVAGGTV LKICDFGTAC DIQTHMTNNK GSAAWMAPEV ENSBTAP00000003401/1-579 ALIHRDLKPP NLLLVAGGTV LKICDFGTAC DIQTHMTNNK GSAAWMAPEV 201 250 bmy_00501T0/1-373 FEGSNYSEKC DVFSWGIILW EVITRRKPFD EIGGPAFRIM WAVHNGTRPP ENSP00000358335/1-606 FEGSNYSEKC DVFSWGIILW EVITRRKPFD EIGGPAFRIM WAVHNGTRPP BACU020325/1-606 FEGSNYSEKC DVFSWGIILW EVITRRKPFD EIGGPAFRIM WAVHNGTRPP ENSTTRP00000014604/1-606 FEGSNYSEKC DVFSWGIILW EVITRRKPFD EIGGPAFRIM WAVHNGTRPP ENSBTAP00000003401/1-579 FEGSNYSEKC DVFSWGIILW EVITRRKPFD EIGGPAFRIM WAVHNGTRPP 251 300 bmy_00501T0/1-373 LIKNLPKPIE SLMTRCWSKD PSQRPSMEEI VKIMTHLMRY FPGADEPLQY ENSP00000358335/1-606 LIKNLPKPIE SLMTRCWSKD PSQRPSMEEI VKIMTHLMRY FPGADEPLQY BACU020325/1-606 LIKNLPKPIE SLMTRCWSKD PSQRPSMEEI VKIMTHLMRY FPGADEPLQY ENSTTRP00000014604/1-606 LIKNLPKPIE SLMTRCWSKD PSQRPSMEEI VKIMTHLMRY FPGADEPLQY ENSBTAP00000003401/1-579 LIKNLPKPIE SLMTRCWSKD PSQRPSMEEI VKIMTHLMRY FPGADEPLQY 301 350 bmy_00501T0/1-373 PCQYSDEGQS NSATSTGSFM DIASTNTSNK SDTNMEQVPA TNDTIKRLES ENSP00000358335/1-606 PCQYSDEGQS NSATSTGSFM DIASTNTSNK SDTNMEQVPA TNDTIKRLES BACU020325/1-606 PCQYSDEGQS NSATSTGSFM DITSTNTSNK SDTNMEQVPA TNDTIKRLES ENSTTRP00000014604/1-606 PCQYSDEGQS NSATSTGSFM DITSTNTSNK SDTNMEQVPA TNDTIKRLES ENSBTAP00000003401/1-579 PCQYSDEGQS NSATSTGSFM DITSTNTSNK SDTNMEQVPA TNDTIKRLES 351 400 bmy_00501T0/1-373 KLLKNQAKQQ SESGRLSLGA SRGSSVESLP PTSEGKRMSA DMSEIEARIA ENSP00000358335/1-606 KLLKNQAKQQ SESGRLSLGA SRGSSVESLP PTSEGKRMSA DMSEIEARIA BACU020325/1-606 KLLKNQAKQQ SESGRLSLGA SRGSSVESLP PTSEGKRMSA DMSEIEARIA ENSTTRP00000014604/1-606 KLLKNQAKQQ SESGRLSLGA SRGSSVESLP PTSEGKRMSA DMSEIEARIA ENSBTAP00000003401/1-579 KLLKNQAKQQ SESGRLSLGA SRGSSVESLP PTSEGKRMSA DMSEIEARIA 401 450 bmy_00501T0/1-373 ATTAFSKPKR GHRKTASFGN ILDDPEIVIS ---------- ---------- ENSP00000358335/1-606 ATTAYSKPKR GHRKTASFGN ILDVPEIVIS GNGQPRRRSI QDLTVTGTEP BACU020325/1-606 ATTAFSKPKR GHRKTASFGN ILDVPEIVIS GNGQPRRRSI QDLTVTGTEP ENSTTRP00000014604/1-606 ATTAFSKPKR GHRKTASFGN ILDVPEIVIS GNGQPRRRSI QDLTVTGTEP ENSBTAP00000003401/1-579 ATTGNGQPRR ---------- ---------- -------RSI QDLTVTGTDP 451 500 bmy_00501T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000358335/1-606 GQVSSRSSSP SVRMITTSGP TSEKPTRSHP WTPDDSTDTN GSDNSIPMAY BACU020325/1-606 GQVSSRSSSP SVRMITTSGP TSEKPARSHP WTPDDSTDTN GSDNSIPMAY ENSTTRP00000014604/1-606 GQVSSRSSSP SVRMITTSGP TSEKPARSHP WTPDDSTDTN GSDNSIPMAY ENSBTAP00000003401/1-579 GQVSSRSSSP SVRMITTSGP TSEKPARSHP WTPDDSTDTN GSDNSIPMAY 501 550 bmy_00501T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000358335/1-606 LTLDHQLQPL APCPNSKESM AVFEQHCKMA QEYMKVQTEI ALLLQRKQEL BACU020325/1-606 LTLDHQLQPL APCPNSKESM AVFEQHCKMA QEYMKVQTEI ALLLQRKQEL ENSTTRP00000014604/1-606 LTLDHQLQPL APCPNSKESM AVFEQHCKMA QEYMKVQTEI ALLLQRKQEL ENSBTAP00000003401/1-579 LTLDHQLQPL APCPNSKESM AVFEQHCKMA QEYMKVQTEI ALLLQRKQEL 551 600 bmy_00501T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000358335/1-606 VAELDQDEKD QQNTSRLVQE HKKLLDENKS LSTYYQQCKK QLEVIRSQQQ BACU020325/1-606 VAELDQDEKD QQNTSRLVQE HKKLLDENKS LSTYYQQCKK QLEVIRSQQQ ENSTTRP00000014604/1-606 VAELDQDEKD QQNTSRLVQE HKKLLDENKS LSTYYQQCKK QLEVIRSQQQ ENSBTAP00000003401/1-579 VAELDQDEKD QQNTSRLVQE HKKLLDENKS LSTYYQQCKK QLEVIRSQQQ 601 650 bmy_00501T0/1-373 ------ ENSP00000358335/1-606 KRQGTS BACU020325/1-606 KRQGTS ENSTTRP00000014604/1-606 KRQGTS ENSBTAP00000003401/1-579 KRQGTS