KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:48 2014 Check: 00 .. Name: BACU009950/1-242 Len: 338 Check: 8554 Weight: 1.00 Name: ENSBTAP00000003402/1-320 Len: 338 Check: 7786 Weight: 1.00 Name: ENSP00000359958/1-330 Len: 338 Check: 181 Weight: 1.00 Name: ENSTTRP00000013930/1-336 Len: 338 Check: 4887 Weight: 1.00 Name: bmy_08104T0/1-228 Len: 338 Check: 4227 Weight: 1.00 // 1 50 BACU009950/1-242 ---------- ---------- ---------- ---------- ---MMKAGGT ENSBTAP00000003402/1-320 MSTKNFRVSD GDWICPDKKC GNVNFARRTS CNRCGREKTT EAKMMKAGGT ENSP00000359958/1-330 MSTKNFRVSD GDWICPDKKC GNVNFARRTS CNRCGREKTT EAKMMKAGGT ENSTTRP00000013930/1-336 MSTKNFRVSD GDWICPDKKC GNVNFARRTS CNRCGREKTT EAKMMKAGGT bmy_08104T0/1-228 MSTKNFRVSD GDWICPDKKC GNVNFARRTS CNRCGREKTT EAKMMKAGGT 51 100 BACU009950/1-242 EIGKTLAEKS RGLFSANDWQ CKTCSNVNWA RRSECNMCNT PKYAKLEERT ENSBTAP00000003402/1-320 EIGKTLAEKS RGLFSANDWQ CKTCSNVNWA RRSECNMCNT PKYAKLEERT ENSP00000359958/1-330 EIGKTLAEKS RGLFSANDWQ CKTCSNVNWA RRSECNMCNT PKYAKLEERT ENSTTRP00000013930/1-336 EIGKTLAEKS RGLFSANDWQ CKTCSNVNWA RRSECNMCNT PKYAKLEERT bmy_08104T0/1-228 EIGKTLAEKS RGLFSANDWQ CKTCSNVNWA RRSECNMCNT PKYAKLEERT 101 150 BACU009950/1-242 GYGGGFNERE NVEYIEREES DGEYDEFGRK KKKYRGKAVG PASILKEVED ENSBTAP00000003402/1-320 GYGGGFNERE NVEYIEREES DGEYDEFGRK KKKYRGKAVG PASILKEVED ENSP00000359958/1-330 GYGGGFNERE NVEYIEREES DGEYDEFGRK KKKYRGKAVG PASILKEVED ENSTTRP00000013930/1-336 GYGGGFNERE NVEYIEREES DGEYDEFGRK KKKYRGKAVG PASILKEVED bmy_08104T0/1-228 GYGGGFNERE NVEYIEREES DGEYDEFGRK KKKYRGKAVG PASILKEVED 151 200 BACU009950/1-242 KESEGEEEDE DEDLSKYKLD EDEDEDDADL SKYNLDASEE EDSNKKKSNR ENSBTAP00000003402/1-320 KESEGEEEDE DEDLSKYKLD EDEDEDDADL SKYNLDASEE EDSSKKKSNR ENSP00000359958/1-330 KESEGEEEDE DEDLSKYKLD EDEDEDDADL SKYNLDASEE EDSNKKKSNR ENSTTRP00000013930/1-336 KESEGEEEDE DEDLSKYKLD EDEDEDDADL SKYNLDASEE EDSNKKKSNR bmy_08104T0/1-228 KESEGEEEDE DEDLSKYKLD EDEDEDDADL SKYNLDASEE EDSNKKKSNR 201 250 BACU009950/1-242 RSRSKSRSSH SRSSSRSSSP SSSRSRSR-- ---------- ---------- ENSBTAP00000003402/1-320 RSRSKSRSSH SRSSSRSSSP SSSRSRSRSR SRSSSSSQSR SRSSSRERSR ENSP00000359958/1-330 RSRSKSRSSH SRSSSRSSSP SSSRSRSRSR SRSSSSSQSR SRSSSRERSR ENSTTRP00000013930/1-336 RSRSKSRSSH SRSSSRSSSP SSSRSRSRSR SRSSSSSQSR SRSSSRERSR bmy_08104T0/1-228 RSRSKSRSSH SRSSSRSSSP SSSRSRSR-- ---------- ---------- 251 300 BACU009950/1-242 -------SSS RSHRGSSSPR KRSYSSSSSS PERNRKRSRS RSSSSGDRKK ENSBTAP00000003402/1-320 SRGSKSRSSS RSHRGSSSPR KRSYSSSSSS PERNRKRSRS RSSSSGDRKK ENSP00000359958/1-330 SRGSKSRSSS RSHRGSSSPR KRSYSSSSSS PERNRKRSRS RSSSSGDRKK ENSTTRP00000013930/1-336 SRGSKSRSSS RT--GALLPH EKDLTQVHHL LLRGTEREVV LDLLHLVIAK bmy_08104T0/1-228 ---------- ---------- ---------- ---------- ---------- 301 350 BACU009950/1-242 RRTRSRSPER FGFL------ ---------- -------- ENSBTAP00000003402/1-320 RRTRSRSPES QVIGENTKQP ---------- -------- ENSP00000359958/1-330 RRTRSRSPER RHRSSSGSSH SGSRSSSKKK -------- ENSTTRP00000013930/1-336 KDEQDHGHLK GTTGHLLDHP ILVPVQVQKR NNELKFTS bmy_08104T0/1-228 ---------- ---------- ---------- --------