KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:52 2014 Check: 00 .. Name: BACU000388/1-577 Len: 695 Check: 4803 Weight: 1.00 Name: ENSTTRP00000010014/1-589 Len: 695 Check: 9921 Weight: 1.00 Name: bmy_19250T0/1-542 Len: 695 Check: 2815 Weight: 1.00 Name: ENSP00000262916/1-695 Len: 695 Check: 5579 Weight: 1.00 Name: ENSBTAP00000003421/1-590 Len: 695 Check: 3161 Weight: 1.00 // 1 50 BACU000388/1-577 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010014/1-589 ---------- ---------- ---------- ---------- ---------- bmy_19250T0/1-542 ---------- ---------- ---------- ---------- ---------- ENSP00000262916/1-695 MAEAPPRRLG LGPPPGDAPR AELVALTAVQ SEQGEAGGGG SPRRLGLLGS ENSBTAP00000003421/1-590 ---------- ---------- ---------- ---------- ---------- 51 100 BACU000388/1-577 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010014/1-589 ---------- ---------- ---------- ---------- ---------- bmy_19250T0/1-542 ---------- ---------- ---------- ---------- ---------- ENSP00000262916/1-695 PLPPGAPLPG PGSGSGSACG QRSSAAHKRY RRLQNWVYNV LERPRGWAFV ENSBTAP00000003421/1-590 ---------- ---------- ---------- ---------- ---------- 101 150 BACU000388/1-577 ----IFIPEL PVDASPSHPL GTSNSASVSK RIHLPPTVTP PPAVPKSGTP ENSTTRP00000010014/1-589 -----FLLVF SCLVLSVLST IPEHQEIANE CLLILEFVMI VVFGLEYIIR bmy_19250T0/1-542 -----FLLVF SCLVLSVLST IQEHQELANE CLLILEFVMI VVFGLEYIIR ENSP00000262916/1-695 YHVFIFLLVF SCLVLSVLST IQEHQELANE CLLILEFVMI VVFGLEYIVR ENSBTAP00000003421/1-590 -----FLLVF SCLVLSVLST IQEHQEFANE FLLILEFVMI VVFGLEYIIR 151 200 BACU000388/1-577 LSSILCSLP- ---------K KQPRVSPDFI VFVASVAVIA AGTQGNIFAT ENSTTRP00000010014/1-589 IWSAGCCCRY RGWQGRFRFA RKPFCVIDFI VFVASVAVIA AGTQGNIFAT bmy_19250T0/1-542 IWSAGCCCRY RGWQGRFRFA RKPFCVIDFI VFVASVAVIA AGTQGNIFAT ENSP00000262916/1-695 VWSAGCCCRY RGWQGRFRFA RKPFCVIDFI VFVASVAVIA AGTQGNIFAT ENSBTAP00000003421/1-590 VWSAGCCCRY RGWQGRFRFA RKPFCVIDFI VFVASVAVIA AGTQGNIFAT 201 250 BACU000388/1-577 SALRSMRFLQ ILRMVRMDRR GGTWKLLGSV VYAHSKELIT AWYIGFLVLI ENSTTRP00000010014/1-589 SALRSMRFLQ ILRMVRMDRR GGTWKLLGSV VLAHSKXXXX XXXXXXXXXX bmy_19250T0/1-542 SALRSMRFLQ ILRMVRMDRR GGTWKLLGSV VYAHSKELIT AWYIGFLVLI ENSP00000262916/1-695 SALRSMRFLQ ILRMVRMDRR GGTWKLLGSV VYAHSKELIT AWYIGFLVLI ENSBTAP00000003421/1-590 SALRSMRFLQ ILRMVRMDRR GGTWKLLGSV VYAHSKELIT AWYIGFLVLI 251 300 BACU000388/1-577 FASFLVYLAE KDANSDFSSY ADSLWWGTIT LTTIGYGDKT PHTWLGRVLA ENSTTRP00000010014/1-589 XXXXXXXXXX XXXXXXXX-X XXXXXXXXXT LTTIGYGDKT PHTWLGRVLA bmy_19250T0/1-542 FASFLVYLAE KDANSDFSSY ADSLWWGTIT LTTIGYGDKT PHTWLGRVLA ENSP00000262916/1-695 FASFLVYLAE KDANSDFSSY ADSLWWGTIT LTTIGYGDKT PHTWLGRVLA ENSBTAP00000003421/1-590 FASFLVYLAE KDANSDFSSY ADSLWWGTIT LTTIGYGDKT PHTWLGRVLA 301 350 BACU000388/1-577 AGFALLGISF FALPAGILGS GFALKVQEQH RQKHFEKRRM PAANLIQAAW ENSTTRP00000010014/1-589 AGFALLGVSF FALPAGILGS GFALKVQEQH RQKHFEKRRM PAANLIQAAW bmy_19250T0/1-542 AGFALLGISF FALPA----- ---------- ---------- -------AAW ENSP00000262916/1-695 AGFALLGISF FALPAGILGS GFALKVQEQH RQKHFEKRRM PAANLIQAAW ENSBTAP00000003421/1-590 AGFALLGISF FALPAGILGS GFALKVQEQH RQKHFEKRRM PAANLIQAAW 351 400 BACU000388/1-577 RLYSTDTSRA YLTATWYYYD SILPSFRELA LLFEHVQRAR NGGLRPLEVR ENSTTRP00000010014/1-589 RLYSTDTSRA YLTATWYYYD SILPSFKELA LLFEHVQRAR NGGLRPLEVR bmy_19250T0/1-542 RLYSTDTSRA YLTATWYYYD SILPSFRELA LLFEHVQRAR NGGLRPLEVR ENSP00000262916/1-695 RLYSTDMSRA YLTATWYYYD SILPSFRELA LLFEHVQRAR NGGLRPLEVR ENSBTAP00000003421/1-590 RLYSTDASRA YLTATWYYYD SLLPSFRELA LLFEHVQRAR NGGLRPLEVR 401 450 BACU000388/1-577 RAPVPDGAPS RYPPIATCHR PGSTSFCPGE SSRMGIKDRI RMGSSQRRTG ENSTTRP00000010014/1-589 RAPVPDGAPS RYPPVATCHR PGSTYFCPGE SRRMGIKDRI RMGSSQRRTG bmy_19250T0/1-542 RAPVPDGAPS RYPPVATCHR PGSTSFCPGE SSRIGIKDRI RMGSSQRRTG ENSP00000262916/1-695 RAPVPDGAPS RYPPVATCHR PGSTSFCPGE SSRMGIKDRI RMGSSQRRTG ENSBTAP00000003421/1-590 RAPVPDGAPS RYPPVATCHR PGSASFCPGE SSRMGIKDRI RMGSSQRRTG 451 500 BACU000388/1-577 PSKQHLAPPP MPTSPSSEQV GEASSPTKVQ KSWSFNDRTR FRASLRLKPR ENSTTRP00000010014/1-589 PSKQHLAPPP MPTSPSSEQE GEASSPTKVQ KSWSFNDRTR FRASLRLKPR bmy_19250T0/1-542 PSKQHLASPP MPTSPSSEQ- GLGMAPS--- ---------- --AATTCPPA ENSP00000262916/1-695 PSKQHLAPPT MPTSPSSEQV GEATSPTKVQ KSWSFNDRTR FRASLRLKPR ENSBTAP00000003421/1-590 PSKQHLAPPP MPTSPSSEQV GEASSPTKVQ KSWSFNDRTR FRASLRLKPR 501 550 BACU000388/1-577 ASTEEGPSEE VAEEKTYQCE LTVDDVMPAV KTVIRSVRIL KFLVAKRKFK ENSTTRP00000010014/1-589 ASAEEGPSEE VAEEKSYQCE LTVDDVMPAV KTVIRSVRIL KFLVAKRKFK bmy_19250T0/1-542 PDFSEGPSEE VAEEKTYQCE LTVDDVMPAV KTVIRSVRIL KFLVAKRKFK ENSP00000262916/1-695 TSAEDAPSEE VAEEKSYQCE LTVDDIMPAV KTVIRSIRIL KFLVAKRKFK ENSBTAP00000003421/1-590 TSAEEGPSEE VAEEKSYQCE LTVDDVMPAV KMVIRSVRIL KFLVAKRKFK 551 600 BACU000388/1-577 ETLRPYDVKD VIEQYSAGHL DMLGRIKSLQ ARVDQIVGRG PGDRKAREKG ENSTTRP00000010014/1-589 ETLRPYDVKD VIEQYSAGHL DMLGRIKSLQ GRVDQIVGRG PGDRKSREKG bmy_19250T0/1-542 ETLRPYDVKD VIEQYSAGHL DMLGRIKSLQ ARVDQIVGRG PGDRKAREKG ENSP00000262916/1-695 ETLRPYDVKD VIEQYSAGHL DMLGRIKSLQ TRVDQIVGRG PGDRKAREKG ENSBTAP00000003421/1-590 ETLRPYDVKD VIEQYSAGHL DMLGRIKSLQ ARVDQIVGRG PGDRKAREKG 601 650 BACU000388/1-577 DKGPSDTEAV DEISMMGRVV K----VQSIE HKLDLLLGFY SRCLRSGTSA ENSTTRP00000010014/1-589 DKGPSDTEAV DEISMMGRVV KVEKQVQSIE HKLDLLLGFY SRCLRSGTSA bmy_19250T0/1-542 DKGPSDTEAV DEISMMGRVV KVEKQVQSIE HKLDLLLGFY SRCLRSGTSA ENSP00000262916/1-695 DKGPSDAEVV DEISMMGRVV KVEKQVQSIE HKLDLLLGFY SRCLRSGTSA ENSBTAP00000003421/1-590 DKGPSDTEAV DEISIMGRVV KVEKQVQSIE HKLDLLLGFY SRCLRSGTSV 651 700 BACU000388/1-577 SLGTVQVPLF DPDITSDYHS PVDHEDISVS AQTLSISRSV STNMD ENSTTRP00000010014/1-589 SLGTVQVPLF DPDITSDYQS PVDHEDISVS AQTLSTSRSV STNMD bmy_19250T0/1-542 SLGTVQVPLF DPDITSDYHS PVDHEDISVS AQTLSISRSV STNMD ENSP00000262916/1-695 SLGAVQVPLF DPDITSDYHS PVDHEDISVS AQTLSISRSV STNMD ENSBTAP00000003421/1-590 SLGTVQVPLF DPDITSDYHS PVDHEDISVS AQTLSISRSV STNMD