KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:52 2014 Check: 00 .. Name: ENSP00000355428/1-393 Len: 394 Check: 4049 Weight: 1.00 Name: ENSBTAP00000003422/1-325 Len: 394 Check: 4807 Weight: 1.00 Name: ENSTTRP00000013097/1-383 Len: 394 Check: 8363 Weight: 1.00 Name: bmy_21871T0/1-355 Len: 394 Check: 7887 Weight: 1.00 Name: BACU002948/1-385 Len: 394 Check: 5845 Weight: 1.00 // 1 50 ENSP00000355428/1-393 MAELRQVPGG RETPQGELRP EVVEDEVPRS PVAEEPGGGG SSSSEAKLSP ENSBTAP00000003422/1-325 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013097/1-383 MAELRQVPGG RETPQGELRH EVVEDEVPRS PVAEEPGGGG SNSSEAKLSP bmy_21871T0/1-355 MAELRQVPGG RETPQGELRP EVVEDEVPRS P--------- ---------- BACU002948/1-385 MAELRQVPGG RETPQGELRP AVVEDEVPRS PVAEEPGGGG SNSSEAKLSP 51 100 ENSP00000355428/1-393 REEEELDPRI QEELEHLNQA SEEINQVELQ LDEARTTYRR ILQESARKLN ENSBTAP00000003422/1-325 ---------- QEELEHLNQA SEEINQVELQ LDEARTTYRR ILQESARKLN ENSTTRP00000013097/1-383 REEEELDPRI QEELEHLNQA SEEINQVELQ LDEARTTYRR ILQESARKLN bmy_21871T0/1-355 ---------- -EELEHLNQA SEEINQVELQ LDEARTTYRR ILQESARKLN BACU002948/1-385 REEEELDPRI QEELEHLNQA SEEINQVELQ LDEARTTYRR ILQESARKLN 101 150 ENSP00000355428/1-393 TQGSHLGSCI EKARPYYEAR RLAKEAQQET QKAALRYERA VSMHNAAREM ENSBTAP00000003422/1-325 TQGSHLGSCI EKARPYYEAR RLAKEAQQET QKAALRYERA VSMHNAAREM ENSTTRP00000013097/1-383 TQGSHLGSCI E-ARPYYDAR RLA-EAQQET QKAALRYERA VSMHNAAREM bmy_21871T0/1-355 TQGSHLGSCI EKARPYYEAR RLAKEAQQET QKAALRYERA VSMHNAAREM BACU002948/1-385 TQGSHLGSCI EKARPYYEAR RLAKEAQQET QKAALRYERA VSMHNAAREM 151 200 ENSP00000355428/1-393 VFVAEQGVMA DKNRLDPTWQ EMLNHATCKV NEAEEERLRG EREHQRVTRL ENSBTAP00000003422/1-325 VFVAEQGVMA DKNRLDPTWQ EMLNHATCKV NEAEEERLRG EREHQRVTRL ENSTTRP00000013097/1-383 VFVAEQGVMA DKNRLDPTWQ EMLNHATCKV NEAEEERLRG EREHQRVTRL bmy_21871T0/1-355 VFVAEQGVMA DKNRLDPTWQ EMLNHATCKV NEAEEERLRG EREHQRVTRL BACU002948/1-385 VFVAEQGVMA DKNRLDPTWQ EMLNHATCKV NEAEEERLRG EREHQRVTRL 201 250 ENSP00000355428/1-393 CQQAEARVQA LQKTLRRAIG KSRPYFELKA QFSQILEEHK AKVTELEQQV ENSBTAP00000003422/1-325 CQQAEARVQA LQKTLRRAIG KSRPYFELKA QFSQILEEHK AKVTELEQQV ENSTTRP00000013097/1-383 CQQAEARVQA LQKTLRRAIG KSRPYFELKA QFSQILEEHK AKVTELEQQV bmy_21871T0/1-355 CQQAEARVQA LQKTLRRAIG KSRPYFELKA QFSQILEEHK AKVTELEQQV BACU002948/1-385 CQQAEARVQA LQKTLRRAIG KSRPYFELKA QFSQILEEHK AKVTELEQQV 251 300 ENSP00000355428/1-393 AQAKTRYSVA LRNLEQISEQ IHARRRGGLP PHPLGPRRSS PVGAEAGPED ENSBTAP00000003422/1-325 AQAKTRYSVA LRNLEQISEQ IHARRRGQP- AHTPGQRRSS PVGAEAGPDG ENSTTRP00000013097/1-383 AQAKTRYSVA LRNLEQISEQ IHARRRGQL- PHPAGQLRSS PVGAEAGPDG bmy_21871T0/1-355 AQAKTRYSVA LRNLEQISEQ IHARRRGQL- PRPPGQLRSS PVGAEAGPDG BACU002948/1-385 AQAKPRYSVA LRNLEQISEQ IHARRRGQL- PHPPGQLRSS PVGAEAGPDG 301 350 ENSP00000355428/1-393 MEDGDSG-IE GAEGAGLEEG SSLGPGPAPD TDTLSLLSLR TVASDLQKCD ENSBTAP00000003422/1-325 GEDADSGIIE GAEGGGLEEG VSLGPGAAPD TDTLSLLSLR TVASDLQKCD ENSTTRP00000013097/1-383 GEDGDSGIIE GAEGGGLEEG VSLGPGPAPD TDTLSLLSLR TVASDLQKCD bmy_21871T0/1-355 GEDGDSGIIE GAEGGGPEEG ISLGPGPAPD TDTLSLLSLR TVASDLQKCD BACU002948/1-385 GEDGDSGIIE GAEGGGLEEG VSLGPGPAPD TDTLSLLSLR TVASDLQKCD 351 400 ENSP00000355428/1-393 SVEHLRGLSD HVSLDGQELG TRSGGRRGSD GGARGGRHQR SVSL ENSBTAP00000003422/1-325 SVEHLRGLSD HTSLDGQELG PRSGG----- ---RGGRHQR SISL ENSTTRP00000013097/1-383 SVEHLRGLSD HASLDGQELG PRSGG----- ---RSGRHQR SISL bmy_21871T0/1-355 SVEHLRGLSD HTSLDGQELG PRSGG----- ---RSGRHQR SISL BACU002948/1-385 SVEHLRGLSD HTSLDGQELG PRSGG----- ---RSGRHQR SISL