KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:56 2014 Check: 00 .. Name: ENSTTRP00000011441/1-526 Len: 545 Check: 3940 Weight: 1.00 Name: BACU017208/1-485 Len: 545 Check: 7867 Weight: 1.00 Name: bmy_04751T0/1-479 Len: 545 Check: 3541 Weight: 1.00 Name: ENSP00000366746/1-540 Len: 545 Check: 7349 Weight: 1.00 Name: ENSBTAP00000003441/1-534 Len: 545 Check: 7001 Weight: 1.00 // 1 50 ENSTTRP00000011441/1-526 MPLFATNPFD QDVEKATSEM NTAEDWGLIL DICDKVGQSR TGPKDCLRSI BACU017208/1-485 ---------- ---------M NTAEDWGLIL DICDKVGQSR TGPKDCLRSI bmy_04751T0/1-479 ---------- ---------- ---------- ---------- ---------- ENSP00000366746/1-540 MPLFATNPFD QDVEKATSEM NTAEDWGLIL DICDKVGQSR TGPKDCLRSI ENSBTAP00000003441/1-534 MPLFATNPFD QDVEKATSEM NTAEDWGLIL DICDKVGQSR TGPKDCLRSI 51 100 ENSTTRP00000011441/1-526 MRRVNHKDPH VAMQALTLLG ACVSNCGKIF HLEVCSRDFA SEVSNVLNKG BACU017208/1-485 MRRVNHKDPH VAMQALTLLG ACVSNCGKIF HLEVCSRDFA SEVSNVLNKG bmy_04751T0/1-479 MRRVNHKDPH VAMQALTLLG ACVSNCGKIF HLEVCSRDFA SEVSNVLNKG ENSP00000366746/1-540 MRRVNHKDPH VAMQALTLLG ACVSNCGKIF HLEVCSRDFA SEVSNVLNKG ENSBTAP00000003441/1-534 MRRVNHKDPH VAMQALTLLG ACVSNCGKIF HLEVCSRDFA SEVSNVLNKG 101 150 ENSTTRP00000011441/1-526 HPKVCEKLKA LMVEWTDEFK NDPQLSLISA MIKNLKEQGV TFPAIGSQAA BACU017208/1-485 HPKVCEKLKA LMVEWTDEFK NDPQLSLISA MIKNLKEQGV TFPAIGSQAA bmy_04751T0/1-479 HPKVCEKLKA LMVEWTDEFK NDPQLSLISA MIKNLKEQGV TFPAIGSQAA ENSP00000366746/1-540 HPKVCEKLKA LMVEWTDEFK NDPQLSLISA MIKNLKEQGV TFPAIGSQAA ENSBTAP00000003441/1-534 HPKVCEKLKA LMVEWTDEFK NDPQLSLISA MIKNLKEQGV TFPAIGSQAA 151 200 ENSTTRP00000011441/1-526 EQAKASPALV AKDPGTVANK KEEEDLAKAI ELSLKEQRQQ STTLSNLYPS BACU017208/1-485 EQAKASPALV AKDPGTVANK KEEEDLAKAI ELSLKEQRQQ STTLSSLYPS bmy_04751T0/1-479 EQAKASPALV AKDPGTVANK KEEEDLAKAI ELSLKEQRQQ STTLSSLYPS ENSP00000366746/1-540 EQAKASPALV AKDPGTVANK KEEEDLAKAI ELSLKEQRQQ STTLSTLYPS ENSBTAP00000003441/1-534 EQAKASPALV AKDPGTAANK KEEEDLAKAI ELSLKEQRQQ STTLSTLYPS 201 250 ENSTTRP00000011441/1-526 TSNLLTNHQH EGRKVRAIYD FEAAEDNELT FKAGEIITVL DDSDPNWWKG BACU017208/1-485 TSNLLTNHQH EGRKVRAIYD FEAAEDNELT FKAGEIITVL DDSDPNWWKG bmy_04751T0/1-479 TSNLLTNHQH EGRKVRAIYD FEAAEDNELT FKAGEIITVL DDSDPNWWKG ENSP00000366746/1-540 TSSLLTNHQH EGRKVRAIYD FEAAEDNELT FKAGEIITVL DDSDPNWWKG ENSBTAP00000003441/1-534 TSNLLTNHQH EGRKVRAIYD FEAAEDNELT FKAGEIITVL DDSDPNWWKG 251 300 ENSTTRP00000011441/1-526 ETHQGMGLFP SNFVTADLTA EPEMXXXXXX XXXXXXXXXX XXXXXXXXXX BACU017208/1-485 ETHQGMGLFP SNFVTADLPV DPEMIKTEKK TVQFSDDVQV ETLEPEPEQA bmy_04751T0/1-479 ETHQGMGLFP SNFVTADLTA EPEMIKTEKK TVQFSDDVQV ETLEPEPEQA ENSP00000366746/1-540 ETHQGIGLFP SNFVTADLTA EPEMIKTEKK TVQFSDDVQV ETIEPEPEPA ENSBTAP00000003441/1-534 ETHQGMGLFP SNFVTADLTV EPEMIKTEKK TVQFSDEVQV ETIEPEPEPA 301 350 ENSTTRP00000011441/1-526 XXXXDKMDQL LQMLQSTDPS DDQPDLPELL HLEAMCHQMG PLIDEKLEDI BACU017208/1-485 CIDEDKMDQL LQMLQSTDPS DDQPDLPELL HLEAMCHQMG PLIDEKLEDI bmy_04751T0/1-479 CIDEDKMDQL LQMLQSTDPS DDQPDLPELL HLEAMCHQMG PLIDEKLEDI ENSP00000366746/1-540 FIDEDKMDQL LQMLQSTDPS DDQPDLPELL HLEAMCHQMG PLIDEKLEDI ENSBTAP00000003441/1-534 YIDEDKMDQL LQMLQSTDPS DDQPDLPELL HLEAMCHQMG PLIDEKLEDI 351 400 ENSTTRP00000011441/1-526 DRKHSELSEL NVKVMEALSL YTKLMNEDPM YSMYAKLQNQ QYYIQSSGVS BACU017208/1-485 DRKHSELSEL NVKVMEALSL YTKLMNEDPM YSMYAKLQNQ QYYIQSSGVS bmy_04751T0/1-479 DRKHSELSEL NVKVMEALSL YTKLMNEDPM YSMYAKLQNQ QYYIQSSGVS ENSP00000366746/1-540 DRKHSELSEL NVKVMEALSL YTKLMNEDPM YSMYAKLQNQ PYYMQSSGVS ENSBTAP00000003441/1-534 DRKHSELSEL NVKVMEALSL YTKLMNEDPM YSMYAKLQNQ QYYIQSSGVS 401 450 ENSTTRP00000011441/1-526 GSQVYPGPPQ SGAYLVAGSA QLSQPQSYSL PPEQLSSLSQ GAVLP-ASPA BACU017208/1-485 GSQSTSG--- ---------- ---------- --------GR GQHPGEEQPG bmy_04751T0/1-479 GSQVYPGPPQ SGAYLVAGSA QLSQPQSYSL PPEQLSSLSQ GAVLP-AGPA ENSP00000366746/1-540 GSQVYAGPPP SGAYLVAGNA QMSHLQSYSL PPEQLSSLSQ AVVPPSANPA ENSBTAP00000003441/1-534 GSQVY--PPQ SGAYLVAGSA QMSHLQSYSL PPEQLSSLSQ GAVPPSANPA 451 500 ENSTTRP00000011441/1-526 LPSQQAQASY PN-----TMG TSVQGGTYPS QASVYSPPPA A------PDV BACU017208/1-485 LRNVGLHDTY PRVLMPVTMG TSVPGGTYPS QPSVYSPPPA AAAA---PDV bmy_04751T0/1-479 LPSQQAPASY PN-----TMG TSVPGGTYPS QASVYSPPPA AAAA---PDV ENSP00000366746/1-540 LPSQQTQAAY PN-----TMV SSVQGNTYPS QAPVYSPPPA ATAAAATADV ENSBTAP00000003441/1-534 LPTQQAQASY PS-----TMV SSVPGSTYPS QASVYSPPPA ATAA---PDV 501 550 ENSTTRP00000011441/1-526 TIYQNAGSSL SQVPNYTLP- SALPQP---- --PPPQQPYS PKALL BACU017208/1-485 AMYQNAGSSL SQVPNYTLT- SALPQP---- --PPPQQPYS PKALL bmy_04751T0/1-479 TMYQNAGSSL SQVPNYTLT- SALPQP---- --PPPQQPYS PKALL ENSP00000366746/1-540 TLYQNAGPNM PQVPNYNLTS STLPQPGGSQ QPPQPQQPYS QKALL ENSBTAP00000003441/1-534 TIYQNTGTSL SQVPNYTLP- STLPQPGGSQ QPPQPQQPYS QKALL