KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:57 2014 Check: 00 .. Name: ENSP00000355402/1-745 Len: 789 Check: 3591 Weight: 1.00 Name: ENSBTAP00000003445/1-750 Len: 789 Check: 6358 Weight: 1.00 Name: bmy_11979T0/1-747 Len: 789 Check: 5914 Weight: 1.00 Name: BACU017922/1-747 Len: 789 Check: 6186 Weight: 1.00 Name: ENSTTRP00000000057/1-632 Len: 789 Check: 9666 Weight: 1.00 // 1 50 ENSP00000355402/1-745 ---------- ---------- ---------- ---------M FPLRALWLVW ENSBTAP00000003445/1-750 ---------- ---------- ---------- ---------M VPLRALCLAW bmy_11979T0/1-747 ---------- ---------- ---------- ---------M VPLSALWLAW BACU017922/1-747 ---------- ---------- ---------- ---------M VPLRALWLAW ENSTTRP00000000057/1-632 RSNRCGKRPA VVLAPRPQVW RRGCSPRAAA ESRRAAGSAM VPLRALWLAW 51 100 ENSP00000355402/1-745 ALLGVAGSCP EPCACVDKYA HQFADCAYKE LREVPEGLPA NVTTLSLSAN ENSBTAP00000003445/1-750 ALLGAATACP EPCACVDKYA HQFADCAYKE LREVPEGLPA NVTTLSLSAN bmy_11979T0/1-747 ALLGVAGACP EPCACVDKYA HQFADCAYKE LREVPEGLPA NVTTLSLSAN BACU017922/1-747 ALLGVAGACP EPCACVDKYA HQFADCAYKE LREVPEGLPA NVTTLSLSAN ENSTTRP00000000057/1-632 ALLGVARACP EPCACVDKYA HQFADCAYKE LHEVPEGLPA NVTTLSLSAN 101 150 ENSP00000355402/1-745 KITVLRRGAF ADVTQVTSLW LAHNEVRTVE PGALAVLSQL KNLDLSHNFI ENSBTAP00000003445/1-750 KITVLRRGAF ADVTQVTSLW LAHNEVRTVE PGSLAVLSQL KNLDLSHNLI bmy_11979T0/1-747 KITVLRRGAF ANVTQVTSLW LAHNEVRTVE LGSLAVLSQL KNLDLSHNLI BACU017922/1-747 KITVLRRGAF ADVTQVTSLW LAHNEVRTVE LGSLAVLSQL KNLDLSHNLI ENSTTRP00000000057/1-632 KITVLRRGAF ADVTQVTSLW LAHNEVRTVE LGSLAVLSQL KNLDLSHNLI 151 200 ENSP00000355402/1-745 SSFPWSDLRN LSALQLLKMN HNRLGSLPRD ALGALPDLRS LRINNNRLRT ENSBTAP00000003445/1-750 SSFPWSDLRN LSALQLLKMN HNRLGSLPRD ALGALPDLRS LRINNNRLRT bmy_11979T0/1-747 SSFPWSDLRN LSALQLLKMN HNRLGSLPRD ALGALPDLRS LRINNNRLRT BACU017922/1-747 SSFPWSDLRN LSALQLLKMN HNRLGSLPRD ALGALPDLRS LRINNNRLRT ENSTTRP00000000057/1-632 SSFPWSDLRN LSALQLLKMN HNRLGSLPRD ALGALPDLRS LRINNNRLRT 201 250 ENSP00000355402/1-745 LAPGTFDALS ALSHLQLYHN PFHCGCGLVW LQAWAASTRV SLPEPDSIAC ENSBTAP00000003445/1-750 LAPGTFDALS ALSHLQLYHN PFHCSCSLVW LQAWAASTRV SLPEPDSIAC bmy_11979T0/1-747 LAPGTFDALS ALSHLQLYHN PFHCGCSLVW LQAWAASTRV SLPEPDSIAC BACU017922/1-747 LAPGTFDALS ALSHLQLYHN PFHCGCSLVW LQAWAASTRV SLPEPDSIAC ENSTTRP00000000057/1-632 LAPGTFDALS ALSHLQLYHN PFHCGCSLVW LQAWAASTRV SLPEPDSIAC 251 300 ENSP00000355402/1-745 ASPPALQGVP VYRLPALPCA PPSVHLSAEP PLEAPGTPLR AGLAFVLHCI ENSBTAP00000003445/1-750 ASPPELQGVP VHRLPALSCV PPSVHLSMEP PPEAPGSPLP SGLTLMVHCV bmy_11979T0/1-747 ASPPALQGVP VHRLPALSCV PPSVHLSVEP PPEAPGSPLR SGLTLMLHCV BACU017922/1-747 ASPPALQGVP VHRLPALSCV PPSVHLSVEP PPEAPGSPLR SGLTLMLHCV ENSTTRP00000000057/1-632 ASPPALQGVP VHRLPALSCA PPSVHLSVEP PPEAPGSPLR SGLTLMLHCV 301 350 ENSP00000355402/1-745 ADGHPTPRLQ WQLQIPGGTV VLEPPVLSGE DDGVGAEEGE GEGDGDLLTQ ENSBTAP00000003445/1-750 AEGHPTPRLQ WQLQIPGGTV VLAPQVLSGE DGGNGAEDGE GEGDGDGPTQ bmy_11979T0/1-747 AEGHPTPRLQ WQLQIPGGTV VLVPPILSGE DDGDGAEDGE EEGDGDGPTQ BACU017922/1-747 AEGHPTPRLQ WQLQIPGGTV VLVPPILSGE DDGDGAEDGE EEGDGDGPTQ ENSTTRP00000000057/1-632 AEGHPTPRLQ WQLQIPGGTV VLVPPILSGE DDGDGGEDGE EEGDGDGPTQ 351 400 ENSP00000355402/1-745 TQAQTPTPAP AWPAPPATPR FLALANGSLL VPLLSAKEAG VYTCRAHNEL ENSBTAP00000003445/1-750 TEAPTLTPAH AWPAPPATQR FLALTNGSLL VPFLSAKEAG VYTCRAHNEL bmy_11979T0/1-747 TEAPTPTPAP AWPAPPATPR FLALTNGSLL VPLLSAKEAG IYTCRAHNEL BACU017922/1-747 TEAPTPTPAP AWPAPPATPR FLALTNGSLL VPLLSAKEAG IYTCRAHNEL ENSTTRP00000000057/1-632 TEAPTPTPAP AWPAPPATPR FLALTNGSLL VPLLSAKEAG IYTCRAHNEL 401 450 ENSP00000355402/1-745 GANSTSIRVA VAATGPPKHA PGAGGEPDGQ APTSERKSTA KGRGNSVLPS ENSBTAP00000003445/1-750 GANSTSVRVA VAAAGPPKHA PGAGGDPDGQ APTSERKSTA KTRGNSVLTS bmy_11979T0/1-747 GANSTSVRVA VAAAGPPKHA PGAGGDPDGQ APTSERKSTA KTRGNSVLPS BACU017922/1-747 GANSTSVRVA VAAAGPPKHA PGAGRDPDGQ APTSEHKSTA KTRGNSVLPS ENSTTRP00000000057/1-632 GANSTSVRVA VAAAGPPKHA PGSGGDPDGQ APTSERKSTA KTRGNSVLPS 451 500 ENSP00000355402/1-745 KPEGKIKGQG LAKVSILGET ETEP-----E EDTSEGEEAE DQILADPAEE ENSBTAP00000003445/1-750 KPEGKIKGQG VGRVSVLGDS EMGPEQEEAE EEAGEGEEAE NQVPADPVEE bmy_11979T0/1-747 KPEGKIKSQG LGRVSVLGET QAGP---EGD EEAGEGEEAE DQVSADPVEE BACU017922/1-747 KPEGKIKSQG LGRVSVLGET QAGP---EGD EEAGEGEEAE DQVSADPVEE ENSTTRP00000000057/1-632 KPEGKIKSQG LGRVSVLGET QAGP---EGD EEAGEGEEAE DQVSADPVEE 501 550 ENSP00000355402/1-745 QRCGNGDPSR YVSNHAFNQS AELKPHVFEL GVIALDVAER EARVQLTPLA ENSBTAP00000003445/1-750 QRCGQGDLSR YVSNHAFNQS AELKPHVFEL GVIALDVAER EARVQLTPLA bmy_11979T0/1-747 QRCGHGDPSR YVSNHAFNQS AELKPHVFEL GVIALDVAER EARVQLTPLA BACU017922/1-747 QRCGHGDPSR YVSNHAFNQS AELKPHVFEL GVIALDVAER EARVQLTPLA ENSTTRP00000000057/1-632 QRCGHGDPSR YVSNHAFNQS AELKPHVFEL GVIALDVAER EARVQLTPLA 551 600 ENSP00000355402/1-745 ARWGPGPGGA GGAPRPGRRP LRLLYLCPAG GGAAVQWSRV EEGVNAYWFR ENSBTAP00000003445/1-750 ARWGPGPGGA SGGGRPERRP LRLLYLCPAG GGAAVQWSRV EEGVNAYWFR bmy_11979T0/1-747 ARWGPGPGAA AAAGRPGRRP LRLLYLCPAG GGAAVQWSRV EEGVNAYWFR BACU017922/1-747 ARWGPGPGAA AGAGRPGRRP LRLLYLCPAG GGAAVQWSRV EEGVNAYWFR ENSTTRP00000000057/1-632 ARWGPGPGGA AGAGRPGRRP LRLLYLCPAG GGAAVQWSRV EEGVNAYWFR 601 650 ENSP00000355402/1-745 GLRPGTNYSV CLALAGEACH VQVVFSTKKE LPSLLVIVAV SVFLLVLATV ENSBTAP00000003445/1-750 GLRPGTNYSV CLALAGEACH VQVVFATKKE LPSLLVIVAV SVFLLVLATV bmy_11979T0/1-747 GLRPGTNYSV CLALAGEACH VQVVFATKKE LPSLLVIVAV SVFLLVLATV BACU017922/1-747 GLRPGTNYSV CLALAGEACH VQVVFATKKE LPSLLVIVAV SVFLLVLATV ENSTTRP00000000057/1-632 GLRPGTNYSV CLALAGEPCH VQVVFATKKE FPSLL----- ---------- 651 700 ENSP00000355402/1-745 PLLGAACCHL LAKHPGKPYR LILRPQAPDP MEKRIAADFD PRASYLESEK ENSBTAP00000003445/1-750 PLLGAACCHL LAKHPGKPYR LILRPQAPDP MEKRIAADFD PRASYLESEK bmy_11979T0/1-747 PLLGAACCHL LAKHPGKPYR LILRPQAPDP MEKRIAADFD PRASYLESEK BACU017922/1-747 PLLGAACCHL LAKHPGKPYR LILRPQAPDP MEKRIAADFD PRASYLESEK ENSTTRP00000000057/1-632 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000355402/1-745 SYPAGGEAGG EEPEDVQGEG LDEDAEQGDP SGDLQREESL AACSLVESQS ENSBTAP00000003445/1-750 SYPAGGEAGG EEPEEAPGEG LDEDAEQGDP SGDLQREESL AACSLVESQS bmy_11979T0/1-747 SYPAGGEAGG EEPEETSGEG LDEEAEQGDP GGDLQREESL AACSLVESQS BACU017922/1-747 SYPAGGEAGV EEPEETPGEG LDEEAEQGDP DGDLQREESL AACSLVESQS ENSTTRP00000000057/1-632 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000355402/1-745 KANQEEFEAG SEYSDRLPLG AEAVNIAQEI NGNYRQTAG ENSBTAP00000003445/1-750 KANQEEFEAG SEYSDRLPLG AEAVDIAQEI NGNYRQTVG bmy_11979T0/1-747 KANQEEFEAG SEYSDRLPLG AEAVNIAQEI NGNYRQTAG BACU017922/1-747 KANQEEFEAG SEYSDRLPLG AEAVNIAQEI NGNYRQTAG ENSTTRP00000000057/1-632 ---------- ---------- ---------- ---------