KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:57 2014 Check: 00 .. Name: ENSTTRP00000003470/1-330 Len: 377 Check: 5515 Weight: 1.00 Name: ENSBTAP00000003449/1-363 Len: 377 Check: 1859 Weight: 1.00 Name: bmy_10247T0/1-377 Len: 377 Check: 2809 Weight: 1.00 Name: ENSP00000290015/1-357 Len: 377 Check: 2809 Weight: 1.00 Name: BACU006158/1-358 Len: 377 Check: 3762 Weight: 1.00 // 1 50 ENSTTRP00000003470/1-330 ---------- ---------- ---------- ---------- ------LTGR ENSBTAP00000003449/1-363 ---------- --LPLTCPPS LGIVIFHLPS Q-PPRVTGLP SLAPFSLTGR bmy_10247T0/1-377 MAAAPFAPAA PKLPSTPEAS QGIVILPPPL SRPKGHWSPF SLASSSLTGR ENSP00000290015/1-357 ---------- -MRPPPALAL AGLCLLALPA A-AASYFG-- ------LTGR BACU006158/1-358 ---------- -MRPPPALAL AALCLLALPA AAAAAYFG-- ------LTGR 51 100 ENSTTRP00000003470/1-330 EVLTPFPGLG TAPAPAQGGA HLKQCDLLKL SRRQKQLCRR EPGLAETLQD ENSBTAP00000003449/1-363 EVLTPFPGLG TA-APAQGGA HLKQCDLLKL SRRQKQLCRR EPGLAETLQD bmy_10247T0/1-377 EVLTPFPGLG TAPAPAQGGA HLKQCDLLKL SRRQKQLCRR EPGLAETLQD ENSP00000290015/1-357 EVLTPFPGLG TAAAPAQGGA HLKQCDLLKL SRRQKQLCRR EPGLAETLRD BACU006158/1-358 EVLTPFPGLG TAPAPAQGGA HLKQCDLKKL SRRQKQLCRR EPGLAETLQD 101 150 ENSTTRP00000003470/1-330 AAHLSLLECQ FQFRHERWNC SLEGRTGLLK RGFKETAFLY AVSSAALTHT ENSBTAP00000003449/1-363 AAHLSLLECQ FQFRHERWNC SLEGRTGLLK RGFKETAFLY AVSAAALTHT bmy_10247T0/1-377 AAHLSLLECQ FQFRHERWNC SLEGRTGLLK RGFKETAFLY AVSSAALTHT ENSP00000290015/1-357 AAHLGLLECQ FQFRHERWNC SLEGRMGLLK RGFKETAFLY AVSSAALTHT BACU006158/1-358 AAHLSLLECQ FQFRHERWNC SLEGRTGLLK RGFKETAFLY AVSSAALTHT 151 200 ENSTTRP00000003470/1-330 LARACSAGRM ERCTCDDSPG LESRQAWQWG VCGDNLKYST KFLNNFLGPK ENSBTAP00000003449/1-363 LARACSAGRM ERCTCDDSPG LESRQAWQWG VCGDNLKYST KFLNNFLGPK bmy_10247T0/1-377 LARACSAGRM ERCTCDDSPG LESRQAWQWG VCGDNLKYST KFLNNFLGPK ENSP00000290015/1-357 LARACSAGRM ERCTCDDSPG LESRQAWQWG VCGDNLKYST KFLSNFLGSK BACU006158/1-358 LARACSAGRM ERCTCDDSPG LESRQAWQWG VCGDNLKYST KFLNNFLGPK 201 250 ENSTTRP00000003470/1-330 RGSKDLRARV DAHNTHVGIK XXXXXXXXXX XXXXXXXXXX XXXXXXXLSP ENSBTAP00000003449/1-363 RGSKDLRARA DAHNTHVGIK AVKSGLRTTC KCHGVSGSCA VRTCWKQLSP bmy_10247T0/1-377 RGSKDLRARV DAHNTHVGIK AVKSGLRTTC KCHGVSGSCA VRTCWKQLSP ENSP00000290015/1-357 RGNKDLRARA DAHNTHVGIK AVKSGLRTTC KCHGVSGSCA VRTCWKQLSP BACU006158/1-358 RGSKDLRARV DAHNTHVGIK AVKSGLRTTC KCHGVSGSCA VRTCWKQLSP 251 300 ENSTTRP00000003470/1-330 FRET-DVLKL RHDSAVKVSS ATNEALGRLE LWAPARAGSS TRGPAPRPGD ENSBTAP00000003449/1-363 FRDTGQVLKL RYDSAVKVSS ASNEALGRLE LWAPARPGSP SKGPAPRPGD bmy_10247T0/1-377 FRETGQVLKL RHDSAVKVSS ATNEALGRLE LWAPARAGSS TKGPAPRPGD ENSP00000290015/1-357 FRETGQVLKL RYDSAVKVSS ATNEALGRLE LWAPARQGSL TKGLAPRSGD BACU006158/1-358 FRETGQVLKL RHDSAVKVSS ATNEALGRLE LWAPARAGSS TKGPAPRPGD 301 350 ENSTTRP00000003470/1-330 LVYMEDSPSF CRPSKYSPGT AGRVCSREAS CSSLCCGRGY DTQSRLVAFS ENSBTAP00000003449/1-363 LVYMEDSPSF CRPSKYSPGT GGRVCSREAS CSSLCCGRGY DTQSRLTAFS bmy_10247T0/1-377 LVYMEDSPSF CRPSKYSPGT AGRVCSREAS CSSLCCGRGY DTQSRLVAFS ENSP00000290015/1-357 LVYMEDSPSF CRPSKYSPGT AGRVCSREAS CSSLCCGRGY DTQSRLVAFS BACU006158/1-358 LVYMEDSPSF CRPSKYSPGT AGRGGSREAS CSSLCCGRGY DTQSRLVAFS 351 400 ENSTTRP00000003470/1-330 CHCQVQWCCY VECQQCVQEE LVYTCKH ENSBTAP00000003449/1-363 CHCQVQWCCY VECQQCVREE LVYTCKH bmy_10247T0/1-377 CHCQVQWCCY VECQQCVQEE LVYTCKH ENSP00000290015/1-357 CHCQVQWCCY VECQQCVQEE LVYTCKH BACU006158/1-358 CHCQVQWCCY VECQQCVQEE LVYTCKH