KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:02 2014 Check: 00 .. Name: ENSP00000240587/1-1081 Len: 1097 Check: 426 Weight: 1.00 Name: ENSBTAP00000003479/1-1077 Len: 1097 Check: 8570 Weight: 1.00 Name: ENSTTRP00000007484/1-1066 Len: 1097 Check: 3329 Weight: 1.00 Name: bmy_03043T0/1-1097 Len: 1097 Check: 5098 Weight: 1.00 Name: BACU000555/1-849 Len: 1097 Check: 4213 Weight: 1.00 // 1 50 ENSP00000240587/1-1081 ---------- ------MPRR KQQAPRRAAA YVSEELKAAA LVDEGLDPEE ENSBTAP00000003479/1-1077 ---------- ---------- LPVPPVINAA YVSDELKAAA LVDEDIDPGE ENSTTRP00000007484/1-1066 ---------- ---------- ---------- YVSDELKAAA LVDEDIDPEE bmy_03043T0/1-1097 MLFFLSFFLS LLLPVSLLSA LLVPPVITAA YVSDELKAAA LVDEDIDPEE BACU000555/1-849 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000240587/1-1081 HTADGEPSAK YMCPEKELAR ACPSYQNSPA AEFSCHEMDS ESHISETSDR ENSBTAP00000003479/1-1077 SPADGEPSAK YMCPEKELNK TCPSYQNSPA AEFSSHEMDS ESHISETSDR ENSTTRP00000007484/1-1066 SLTDGEPSAK YMCPEKELSK TCPSYQNSPA AEFSSHEMDS ESHISETSDR bmy_03043T0/1-1097 SLADGEPSAK YMCPEKELSK TCPSYQNSPA AEFSSHEMDS ESHISEXSDR BACU000555/1-849 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000240587/1-1081 MADFESGSIK NEEETKEVTV PLEDTTVSDS LEQMKAVYNN FLSNSYWSNL ENSBTAP00000003479/1-1077 MADFESGSIK NEEETKEVTI PPEDTTVSDS LEQMKAVYNN FLSNSYWSNL ENSTTRP00000007484/1-1066 MADFESGSMK NEEEAKEVAV PPEDSTVSDS LEQMKAVYNN FLSNSYWSSL bmy_03043T0/1-1097 MADFESGSIK NEEETKEVAV PPEDTTVSDS LEQMKAVYNH FLSNSYWSNL BACU000555/1-849 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000240587/1-1081 NLNLHQPSSE KNNGSSSSSS SSSSSCGSGS FDWHQSAMAK TLQQVSQSRM ENSBTAP00000003479/1-1077 TLNLHQPSSE KNNGSSSSSS SSSSSCGSGS FDWHQSAMAK TLQQVSQSRM ENSTTRP00000007484/1-1066 TLNLHQPSSE KNNGSCSSSS SSSSSCGSGS FDWHQSAMAK TLQQVSQSRV bmy_03043T0/1-1097 TLNLHQPSSE KNNGSSSSSS SSSSSCGSGS FDWHQSAMAK TLQQVSQSRV BACU000555/1-849 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000240587/1-1081 LPEPSLFSTV QLYRQSSKLY GSIFTGASKF RCKDCSAAYD TLVELTVHMN ENSBTAP00000003479/1-1077 LPEPSLFSTV QLYRQSSKLY GSIFTGASKF RCKDCSAAYD TLVELTVHMN ENSTTRP00000007484/1-1066 LPEPSLFSTV QLYRQSSKLY GSIFTGASKF RCKDCSAAYD TLVELTVHMN bmy_03043T0/1-1097 LPEPSLFSTV QLYRQSSKLY GSIFTGASKF RCKDCSAAYD TLVELTVHMN BACU000555/1-849 ---------- ---------- ---------- ---------- --------MN 251 300 ENSP00000240587/1-1081 ETGHYRDDNH ETDNNNPKRW SKPRKRSLLE MEGKEDAQKV LKCMYCGHSF ENSBTAP00000003479/1-1077 ETGHYRDDNH ETDNNNPKRW SKPRKRSLLE MEGKEDAQKV LKCMYCGHSF ENSTTRP00000007484/1-1066 ETGHYRDDNH ETDNNNPKRW SKPRKRSLLE MEGKEDAQKV LKCMYCGHSF bmy_03043T0/1-1097 ETGHYRDDNH ETDNNNPKRW SKPRKRSLLE MEGKEDAQKV LKCMYCGHSF BACU000555/1-849 ETGHYRDDNH ETDNNNPKRW SKPRKRSLLE MEGKEDAQKV LKCMYCGHSF 301 350 ENSP00000240587/1-1081 ESLQDLSVHM IKTKHYQKVP LKEPVTPVAA KIIPATRKKA SLELELPSSP ENSBTAP00000003479/1-1077 ESLQDLSVHM IKTKHYQKVP LKEPVTPVAA KIIPAARKKA SLELELPSSP ENSTTRP00000007484/1-1066 ESLQDLSVHM IKTKHYQKVP LKEPVTPVAA KIIPATRKKA SLELELPSSP bmy_03043T0/1-1097 ESLQDLSVHM IKTKHYQKVP LKEPVTPVAA KIIPAARKKA SLELELPSSP BACU000555/1-849 ESLQDLSVHM IKTKHYQKVP LKEPVTPVAA KIIPAARKKA SLELELPSSP 351 400 ENSP00000240587/1-1081 DSTGGTPKAT ISDTNDALQK NSNPYITPNN RYGHQNGASY AWHFEARKSQ ENSBTAP00000003479/1-1077 DSTGGTPKAA MADTNDALQK NSNPYITPNN RYGHQNGASY AWHFEARKSQ ENSTTRP00000007484/1-1066 DSTGGTPKAA MADTNDVLQK NSNPYITPNN RYGHQNGASY AWHFEARKSQ bmy_03043T0/1-1097 DSTGGTPKAA MADTNDVLQK NSNPYITPNN RYGHQNGASY AWHFEARKSQ BACU000555/1-849 DSTSGTPKAA IADTNDVLQK NSNPYITPNN RYGHQNGASY AWHFEARKSQ 401 450 ENSP00000240587/1-1081 ILKCMECGSS HDTLQELTAH MMVTGHFIKV TNSAMKKGKP IVETPVTPTI ENSBTAP00000003479/1-1077 ILKCMECGSS HDTLQELTAH MMVTGHFIKV TNSAMKKGKP IMETPVTPSI ENSTTRP00000007484/1-1066 ILKCMECGSS HDTLQELTAH MMVTGHFIKV TNSAMKKGKP IMETPVTPSI bmy_03043T0/1-1097 ILKCMECGSS HDTLQELTAH MMVTGHFIKV TNSAMKKGKP IMETPVTPSI BACU000555/1-849 ILKCMECGSS HDTLQELTAH MMVTGHFIKV TNSAMKKGKP IMETPVTPSI 451 500 ENSP00000240587/1-1081 TTLLDEKVQS VPLAATTFTS PSNTPASISP KLNVEVKKEV DKEKAVTDEK ENSBTAP00000003479/1-1077 TSLLDEKVQS VPLAATTFTS PSNTPASISP KLNVEVKKEA DKEKAVLEEK ENSTTRP00000007484/1-1066 TTLLDEKVQS VPLAATTFTS PSNTPASVSP KLNVEVKKEA DKEKVVTDEK bmy_03043T0/1-1097 TTLLDEKVQS VPLAATTFTS PSNTPASVSP KLNVEVKKEA DKEKAVTDEK BACU000555/1-849 TTLLDEKVQS VPLAATTFTS PSNTPASVSP KLNVEVKKEA DKEKAVSDEK 501 550 ENSP00000240587/1-1081 PKQKDKPGEE EEKCDISSKY HYLTENDLEE SPKGGLDILK SLENTVTSAI ENSBTAP00000003479/1-1077 PKEKEKACEE EEKYDISSKY HYLTENDLEE SPKGGLDILK SLENTVTSAI ENSTTRP00000007484/1-1066 PKEKEKAC-E EEKYDISSKY HYLTENDLEE SPKGGLDILK SLENTVTSAI bmy_03043T0/1-1097 PKEKEKACEE EEKYDISSKY HYLTENDLEE SPKGGLDILK SLENTVTSAI BACU000555/1-849 PKEKEKACEE EEKYDISSKY HYLTENDLEE SPKGGLDILK SLENTVTSAI 551 600 ENSP00000240587/1-1081 NKAQNGTPSW GGYPSIHAAY QLPNMMKLSL GSSGKSTPLK PMFGNSEIVS ENSBTAP00000003479/1-1077 NKAQNGTPSW GGYPSIHAAY QLPNMMKLSL GSAGKSTPLK PMFGNSDIVS ENSTTRP00000007484/1-1066 NKAQNGTPSW GGYPSIHAAY QLPNMMKLSL GSAGKSAALK PMFGNSDIVS bmy_03043T0/1-1097 NKAQNGTPSW GGYPSIHAAY QLPNMMKLSL GSAGKSAPLK PMFGNSDIVS BACU000555/1-849 NKAQNGTPSW GGYPSIHAAY QLPNMMKLSL GSAGKSTPLK PMFGNSDIVS 601 650 ENSP00000240587/1-1081 PTKNQTLVSP PSSQTSPMPK TNFHAMEELV KKVTEKVAKV EEKMKEPDGK ENSBTAP00000003479/1-1077 PTKNQTLITP PSSQTSPMPK TNFHAMEELV KKVTEKVAKV EEKMKEPEGK ENSTTRP00000007484/1-1066 PTKNQTLISP PSSQTSPMPK TNFHAMEELV KKVTEKVAKV EEKMKEPEGK bmy_03043T0/1-1097 PTKNQTLISP PSSQTSPMPK TNFHAMEELV KKVTEKVAKV EEKMKEPEGK BACU000555/1-849 PTKNQTLISP PSSQTSPMPK TNFHAMEELV KKVTEKVAKV EEKMKEPEGK 651 700 ENSP00000240587/1-1081 LSPPKRATPS PCSSEVGEPI KMEASSDGGF RSQENSPSPP RDGCKDGSPL ENSBTAP00000003479/1-1077 LSPPKRATPS PCSSDISEPI KMEASSDGGF KSQEDSPSPQ RDGCKEGSPL ENSTTRP00000007484/1-1066 LSPPKRATPS PCSSDISEPI RMEASSDGGF KSQEDSPSPQ RDGCKEGSPP bmy_03043T0/1-1097 LSPPKRATPS PCSSEVSEPI RMEASSDGGF KSQEDSPSPQ QDGCKEGSPP BACU000555/1-849 LSPPKRATPS PCSSEVSEPI RMEASSDGGF KSQEDSPSPQ RDGCKEGSPP 701 750 ENSP00000240587/1-1081 AEPVENGKEL VKPLASSLSG STAIITDHPP EQPFVNPLSA LQSVMNIHLG ENSBTAP00000003479/1-1077 AEPVENGKDL VKPMSSGLSS STAIITDHPP EQPFVNPLSA LQSVMNIHLG ENSTTRP00000007484/1-1066 AEPVENGKDL VKPLSSGLSS STAIITDHPP EQPFVNPLSA LQSVMNIHLG bmy_03043T0/1-1097 AEPVENGKDL VKPTRSGLSS STAIITDHPP EQPFVNPLSA LQSVMNIHLG BACU000555/1-849 AEPVENRGDL VKPISSGLSS STAIITDHPP EQPFVNPLSA LQSVMNIHLG 751 800 ENSP00000240587/1-1081 KAAKPSLPAL DPMSMLFKMS NSLAEKAAVA TPPPLQSKKA DHLDRYFYHV ENSBTAP00000003479/1-1077 KAAKPSLPAL DPMSMLFKMS NSLAEKAAVA TPPPLQSKKA DHLDRYFYHV ENSTTRP00000007484/1-1066 KAAKPSLPAL DPMSMLFKMS NSLAEKAAVA TPPPLQSKKV DHLDRYFYHV bmy_03043T0/1-1097 KAAKPSLPAL DPMSMLFKMS NSLAEKAAVA TPPPLQSKKV DHLDRYFYHV BACU000555/1-849 KAAKPSLPAL DPMSMLFKMS NSLAEKAAVA TPPPLQSKKV DHLDRYFYHV 801 850 ENSP00000240587/1-1081 NNDQPIDLTK GKSDKGCSLG SVLLSPTSTA PATSSSTVTT AKTSAVVSFM ENSBTAP00000003479/1-1077 SNDQPIDLTK GKNDKGCSLG SALLSPTSAS PATSSSTVTT AKTSAVVSFM ENSTTRP00000007484/1-1066 SNDQPIDLTK GKSDKGCPLG SVLLSPTSTS PATSSSTVTT AKTSAVVSFM bmy_03043T0/1-1097 NNDQPIDLTK GKSDKGCSLG SVLLSPTSTS PATSSSTVTT AKTSAVVSFM BACU000555/1-849 NNDQPIDLTK GKSDKGCSLG SVLLSPTSTS PATSSSTVTT AKTSAVVSFM 851 900 ENSP00000240587/1-1081 SNSPLRENAL SDISDMLKNL TESHTSKSST PSSISEKSDI DGATLEEAEE ENSBTAP00000003479/1-1077 SNSPLRENAL SDISDMLKNL TESHTSKSST PSSISEKSDI DGATLEEAEE ENSTTRP00000007484/1-1066 SSSPLRENAL SDISDMLKNL TESHTSKSST PSSISEKSDI DGATLEEAEE bmy_03043T0/1-1097 SNSPLRENAL SDISDMLKNL TESHTSKSST PSSISEKSDI DGATLEEAEE BACU000555/1-849 SNSPLRENAL SDISDMLKNL TESHTSKSST PSSISEKSDI DGATLEEAEE 901 950 ENSP00000240587/1-1081 STPAQKRKGR QSNWNPQHLL ILQAQFAASL RQTSEGKYIM SDLSPQERMH ENSBTAP00000003479/1-1077 ATPAQKRKGR QSNWNPQHLL ILQAQFAASL RQTSEGKYIM SDLSPQERMH ENSTTRP00000007484/1-1066 VTPAQKRKGR QSNWNPQHLL ILQAQFAASL RQTSEGKYIM SDLSPQERMH bmy_03043T0/1-1097 ATPAQKRKGR QSNWNPQHLL ILQAQFAASL RQTPEGKYIM SDLSPQERMH BACU000555/1-849 ATPAQKRKGR QSNWNPQHLL ILQAQFAASL RQTSEGKYIM SDLSPQERMH 951 1000 ENSP00000240587/1-1081 ISRFTGLSMT TISHWLANVK YQLRRTGGTK FLKNLDTGHP VFFCNDCASQ ENSBTAP00000003479/1-1077 ISRFTGLSMT TISHWLANVK YQLRRTGGTK FLKNLDTGHP VFFCNDCASQ ENSTTRP00000007484/1-1066 ISRFTGLSMT TISHWLANVK YQLRRTGGTK FLKNLDTGHP VFFCNDCASQ bmy_03043T0/1-1097 ISRFTGLSMT TISHWLANVK YQLRRTGGTK FLKNLDTGHP VFFCNDCASQ BACU000555/1-849 ISRFTGLSMT TISHWLANVK YQLRRTGGTK FLKNLDTGHP VFFCNDCASQ 1001 1050 ENSP00000240587/1-1081 IRTPSTYISH LESHLGFRLR DLSKLSTEQI NSQIAQTKSP SEKMVTSSPE ENSBTAP00000003479/1-1077 IRTPSTYISH LESHLGFRLR DLSKLSTEQI NNQIAQTKSP SEKLVTSSPE ENSTTRP00000007484/1-1066 IRTPSTYISH LESHLGFRLR DLSKLSTEQI NNQIAQTKSP SEKLVTSSPE bmy_03043T0/1-1097 IRTPSTYISH LESHLGFRLR DLSKLSTEQI NNQIAQTKSP SEKLVTSSPE BACU000555/1-849 IRTPSTYISH LESHLGFRLR DLSKLSTEQI NNQIAQTKSL SEKLVTSSPE 1051 1100 ENSP00000240587/1-1081 EDLGTSYQCK LCNRTFASKH AVKLHLSKTH GKSPEDHLLY VSELEKQ ENSBTAP00000003479/1-1077 EDLGTSYQCK LCNRTFASKH AVKLHLSKTH GKSPEDHLLY VSELEKQ ENSTTRP00000007484/1-1066 EDLGTSYQCK LCNRTFASKH AVKLHLSKTH GKSPEDHLLY VSELEKQ bmy_03043T0/1-1097 EDLGTXYQCK LCNRTFASKH AVKLHLSKTH GKSPEDHLLY VSELEKQ BACU000555/1-849 EDLGTSYQCK LCNRTFASKH AVKLHLSKTH GKSPEDHLLY VSELEKQ