KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:03 2014 Check: 00 .. Name: ENSP00000356782/1-400 Len: 401 Check: 6678 Weight: 1.00 Name: bmy_03701T0/1-346 Len: 401 Check: 4739 Weight: 1.00 Name: ENSBTAP00000003484/1-401 Len: 401 Check: 5370 Weight: 1.00 Name: BACU004252/1-401 Len: 401 Check: 3540 Weight: 1.00 Name: ENSTTRP00000003771/1-401 Len: 401 Check: 5658 Weight: 1.00 // 1 50 ENSP00000356782/1-400 -MTTKNLETK VTVTSSPIRG AGDGMETEEP PKSVEVTSGV QSRKHHSLQS bmy_03701T0/1-346 MTALESLETK VILTSSPIRG AGDGMETEEP PKSIEVTPGI QPIKHHILPS ENSBTAP00000003484/1-401 MTTLESLETK AILTPSPIRG AGDGMETEEP PKSIEVTPGI QPITHHILQN BACU004252/1-401 MTTLESLETK VILTSSPIRG AGDGMETEEP PKSIEVTPVI QPIKHHILPS ENSTTRP00000003771/1-401 MTTLESLETK VILTSSPIRG AGDGMETEEP PKSIEVTPGI QPIKHHVLPS 51 100 ENSP00000356782/1-400 PWKKAVPSES PGVLQLGKML TEKAMEVKAV RILVPKAAIT HDIPNKNTKV bmy_03701T0/1-346 PRKKAVPSES PGVLQLGKIL AEKAVEVKAV RILVPKAAIT HDIPNKNAKV ENSBTAP00000003484/1-401 PRKKAVPSES PGVLQLGKIL AEKAVEVEAV RILVPKAAIT HNIPYKNAKV BACU004252/1-401 PRKKAVPSES PGVLQLGKIL AEKAVEVEAV RILVPKAAIT HDIPNKNAKV ENSTTRP00000003771/1-401 PRKKAVPSES PGVLQLGKIL TEKAVEVEAV RILVPKAAIT HDIPNKNAKV 101 150 ENSP00000356782/1-400 KSLGHHKGEF LGQSEGVIEP NKELSEVKNV LEKLKNSERR LLQDKEGLSN bmy_03701T0/1-346 KSLGHHKGEF LGQPEGVEEP RKELSEVKNI LEKLKNSERR LLQDKEGLSN ENSBTAP00000003484/1-401 KSLGHHKGEL LGQPEGVREP RKELSEVKNT LEKLKNSERR LLQDKEGLSN BACU004252/1-401 KSLGHHKGEL LGQPEGVEEP RKELSEVKNI LEKLKNSERR LLQDKEGLSN ENSTTRP00000003771/1-401 KSLGHHKGEF LGQPEGVEEP RKELSEVKNI LEKLKNSERR LLQDKEGLSN 151 200 ENSP00000356782/1-400 QLRVQTEVNR ELKKLLVASV GDDLQYHFER LAREKNQLIL ENEALGRNTA bmy_03701T0/1-346 QLRVQSEVNR ELKKLLVASV GDDLQYHFER LAREKNQLIL ENEALGRNIA ENSBTAP00000003484/1-401 QLRVQSEVNR ELKKLLVASV GDDLQYHFER VAREKNQLIL ENEALGRNIA BACU004252/1-401 QLRVQSEVNR ELKKLLVASV GDDLQYHFER LAREKNQLIL ENEALGRNIA ENSTTRP00000003771/1-401 QLRVQSEVNR ELKKLLVASV GDDLQYHFER LAREKNQLIL ENEALGRNTA 201 250 ENSP00000356782/1-400 QLSEQLERMS IQCDVWRSKF LASRVMADEL TNSRAALQRQ NRDAHGAIQD bmy_03701T0/1-346 QLSEQLERMS IQCDVWRSKF LASRVMADEL TNSRAVLQRQ NRDAQSAIQD ENSBTAP00000003484/1-401 QLSEQLERMS IQCDVWRSKF LASRVMADEL TNSRAVLQRQ NRDAQSAIQD BACU004252/1-401 QLSEQLERMS IQCDVWRSKF LASRVMADEL TNSRAVLQRQ NRDAQSAIQD ENSTTRP00000003771/1-401 QLSEQLERMS IQCDVWRSKF LASRVMADEL TNSRAVLQRQ NRDAQSAIQD 251 300 ENSP00000356782/1-400 LLSEREQFRQ EMIATQKLLE ELLVSLQWGR EQTYSPSVQP HSTAELALTN bmy_03701T0/1-346 LLSEREQFRQ EMIAAQ---- ---------- ---------- ---------- ENSBTAP00000003484/1-401 LLSEREQFRQ EMIATQKLLE ELLVSLQWGR EQTYYPSGQP HSTAELALTN BACU004252/1-401 LLSEREQFRQ EMIAAQKLLE ELLVSLQWGR EQTYYPSAQP HSTAELALTN ENSTTRP00000003771/1-401 LLSEREQFRQ EMITTQKLLE ELLVSLQWGR EQTYYPNAQP HSTAELALTN 301 350 ENSP00000356782/1-400 HKLAKAVNSH LLGNVGINNQ KKIPSTVEFC STPAEKMAET VLRILDPVTC bmy_03701T0/1-346 -KYGTCLHSE L--------- --FSFLLQFL ---------L VLRILDPVTC ENSBTAP00000003484/1-401 HKLAKAVNSH LLGNVGTNGQ KKVPSTVEFC STPAEKMAET VLRILDPVTC BACU004252/1-401 HKLAKAINSH LLGNVGTNGQ KKFPSTVEFC STPAEKMAET VLRSLDPVSC ENSTTRP00000003771/1-401 HKLAKAVNSH LLGNVGTNGQ KKFPSTVEFC STPAEKMAET VLRILDPVTC 351 400 ENSP00000356782/1-400 KESSPDNPFF ESSPTTLLAT KKNIGRFHPY TRYENITFNC CNHCRGELIA bmy_03701T0/1-346 TESSPDNPFS ESSPTTLLAT KKNIGRFHPY TRYENITFNC CNHCQGELIA ENSBTAP00000003484/1-401 TESSPDNPFS ESSPTTLLAT KKNIGRFHPY TRYENITFNC CNHCQGELIA BACU004252/1-401 TESSPDNPFS KSSTTTLLAT KKNIGRFHPY TRYENITFNC CNHCQGELIA ENSTTRP00000003771/1-401 TESSADNPFS ESSPTTLLAT KKNIGRFHPY TRYENITFNC CGNCQGELTA 401 450 ENSP00000356782/1-400 L bmy_03701T0/1-346 L ENSBTAP00000003484/1-401 L BACU004252/1-401 L ENSTTRP00000003771/1-401 L