KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:07 2014 Check: 00 .. Name: ENSTTRP00000003118/1-499 Len: 557 Check: 9942 Weight: 1.00 Name: BACU012352/1-443 Len: 557 Check: 4627 Weight: 1.00 Name: bmy_19108T0/1-531 Len: 557 Check: 3486 Weight: 1.00 Name: ENSP00000358865/1-499 Len: 557 Check: 3071 Weight: 1.00 Name: ENSBTAP00000003517/1-499 Len: 557 Check: 2337 Weight: 1.00 // 1 50 ENSTTRP00000003118/1-499 ---------- ---------- ---------- --MSFGSEHY LGAASSYRKV BACU012352/1-443 ---------- ---------- ---------- --MSFGSEHY LGAASSYRKV bmy_19108T0/1-531 PVHTAPPHPV RLTSLLLVSS SRSRCPGPGP GTMSFGSEHY LGAASSYRKV ENSP00000358865/1-499 ---------- ---------- ---------- --MSFGSEHY LCSSSSYRKV ENSBTAP00000003517/1-499 ---------- ---------- ---------- --MSFGSEHY LCASSSYRKV 51 100 ENSTTRP00000003118/1-499 FGDGSRLSSR LPGAGGAGSF RSQSLSRCNV ASSAACSSAS SLGLGLAYRR BACU012352/1-443 FGDGSRLSSR LSGAGAAGSF RSQSLSRCNV ASSAACSSAS SLGLGLAYRR bmy_19108T0/1-531 FGDGSRLSSR LSGAGGAGSF RSQSLSRCNV ASSAACSSAS SLGLGLAYRR ENSP00000358865/1-499 FGDGSRLSAR LSGAGGAGGF RSQSLSRSNV ASSAACSSAS SLGLGLAYRR ENSBTAP00000003517/1-499 FGDGSRLSSR LSGAGGSGSF RSQSLSRSNV ASSAACSSAS SLGLGLAYRR 101 150 ENSTTRP00000003118/1-499 SPASDGLDLS QAAARTNEYK IIRTNEKEQL QGLNDRFAMF IEKVHQLETQ BACU012352/1-443 SPASDGLDLS QAAARTNEYK IIRTNEKEQL QGLNDRFAMF IEK------- bmy_19108T0/1-531 SPASDGLDLS QAAARTNEYK IIRTNEKEQL QGLNDRFAMF IEKVHQLETQ ENSP00000358865/1-499 PPASDGLDLS QAAARTNEYK IIRTNEKEQL QGLNDRFAVF IEKVHQLETQ ENSBTAP00000003517/1-499 SPASDGLDLS QAAARTNEYK IIRTNEKEQL QGLNDRFAVF IEKVHQLETQ 151 200 ENSTTRP00000003118/1-499 NRALEAELAA LRQRHAEPSR LGELFQRELR ELRAQLEEAS SARAQALLER BACU012352/1-443 ---------- ---------- ---------- ---------- ---------- bmy_19108T0/1-531 NRALEAELAA LRQRHAEPSR LGELFQRELR ELRAQLEEAS SARSQALLER ENSP00000358865/1-499 NRALEAELAA LRQRHAEPSR VGELFQRELR DLRAQLEEAS SARSQALLER ENSBTAP00000003517/1-499 NRALEAELAA LRQRHAEPSR VGELFQRELR DLRAQLEEAS SARAQALLER 201 250 ENSTTRP00000003118/1-499 DGLAEEVQRL RARCEEESRG REGAERALKA QQRDVDGATL ARLDLEKKVE BACU012352/1-443 ---------- ---------- -----RALKA QQRDVDGATL ARLDLEKKVE bmy_19108T0/1-531 DGLAEEVQRL RARCEEESRG REGAERALKA QQRDVDGATL ARLDLEKKVE ENSP00000358865/1-499 DGLAEEVQRL RARCEEESRG REGAERALKA QQRDVDGATL ARLDLEKKVE ENSBTAP00000003517/1-499 DGLAEEVQRL RARCEEESRG REGAERALKA QQRDVDGATL ARLDLEKKVE 251 300 ENSTTRP00000003118/1-499 SLLDELAFVR QVHDEEVAEL LATLQASSQA AAEVDVAVAK PDLTSALREI BACU012352/1-443 SLLDELAFVR QVHDEEVAEL LATLQASSQA AAEVDVAVAK PDLSSALREI bmy_19108T0/1-531 SLLDELAFVR QVHDEEVAEL LATLQASSQA AAEVDVAVAK PDLSSALREI ENSP00000358865/1-499 SLLDELAFVR QVHDEEVAEL LATLQASSQA AAEVDVTVAK PDLTSALREI ENSBTAP00000003517/1-499 SLLDELAFVR QVHDEEVAEL LATLQASSQA AAEVDVAVAK PDLSSALREI 301 350 ENSTTRP00000003118/1-499 RAQYESLAAK NLQSAEEWYK SKFANLNEQA ARSTEAIRAS REEIHEYRRQ BACU012352/1-443 RAQYESLAAK NLQSAEEWYK SKFANLNEQA ARSTEAIRAS REEIHEYRRQ bmy_19108T0/1-531 RAQYESLAAK NLQSAEEWYK SKFANLNEQA ARSTEAIRAS REEIHEYRRQ ENSP00000358865/1-499 RAQYESLAAK NLQSAEEWYK SKFANLNEQA ARSTEAIRAS REEIHEYRRQ ENSBTAP00000003517/1-499 RAQYESLAAK NLQSAEEWYK SKFANLNEQA ARSTEAIRAS REEIHEYRRQ 351 400 ENSTTRP00000003118/1-499 LQARTIEIEG LRGANESLER QILELEERHS AEVASYQXXX XXXXXXXXXX BACU012352/1-443 LQARTIEIEG LRGANESLER QILELEERHS AEVASYQDNI GQLENDLRNT bmy_19108T0/1-531 LQARTIEIEG LRGANESLER QILELEERHS AEVASYQDNI GQLENDLRNT ENSP00000358865/1-499 LQARTIEIEG LRGANESLER QILELEERHS AEVAGYQDSI GQLENDLRNT ENSBTAP00000003517/1-499 LQARTIEIEG LRGANESLER QILELEERHS AEVASYQDNI GQLENDLRNT 401 450 ENSTTRP00000003118/1-499 XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ---------- ---------- BACU012352/1-443 KSEMARHLRE YQDLLNVKMA LDIEIAAYRG WRVKFFKKKK FQVDFLRVFL bmy_19108T0/1-531 KSEMARHLRE YQDLLNVKMA LDIEIAA--- ---------- ---------- ENSP00000358865/1-499 KSEMARHLRE YQDLLNVKMA LDIEIAA--- ---------- ---------- ENSBTAP00000003517/1-499 KSEMARHLRE YQDLLNVKMA LDIEIAA--- ---------- ---------- 451 500 ENSTTRP00000003118/1-499 ---XXKLLEG EETRFSTSGL SISGLNPLPN PSYLLPPRIL SSTTSKVSST BACU012352/1-443 CWIYRKLLEG EETRFSTSGL SISGLNPLPN PSYLLPPRIL SSTTSKVSST bmy_19108T0/1-531 ---YRKLLEG EETRFSTSGL SISGLNPLPN PSYLLPPRIL SSTTSKVSST ENSP00000358865/1-499 ---YRKLLEG EETRFSTSGL SISGLNPLPN PSYLLPPRIL SATTSKVSST ENSBTAP00000003517/1-499 ---YRKLLEG EETRFSTSGL SISGLNPLPN PSYLLPPRIL SSTTSKGSAT 501 550 ENSTTRP00000003118/1-499 GLSLKKEEEE EEASKVATKK TSQIGESFEE ILEETVISAK KTEKSNIEES BACU012352/1-443 GLSLKKEEEE EEASKVAVKK TSQLGESFEE ILEETVISAK KTEKSNIEEN bmy_19108T0/1-531 GLSLKKEEEE EEASKVAAKK TSQLGESFEE ILEETVISAK KTEKSNIEEN ENSP00000358865/1-499 GLSLKKEEEE EEASKVASKK TSQIGESFEE ILEETVISTK KTEKSNIEET ENSBTAP00000003517/1-499 GLSLKKEEEE EEASKIASKK TSQIGESFEE ILEETVISTK KTEKSNIEET 551 600 ENSTTRP00000003118/1-499 TISSQKI BACU012352/1-443 TISSQKI bmy_19108T0/1-531 TISSQKI ENSP00000358865/1-499 TISSQKI ENSBTAP00000003517/1-499 TISSQKI