KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:08 2014 Check: 00 .. Name: ENSP00000371101/1-688 Len: 688 Check: 8866 Weight: 1.00 Name: ENSBTAP00000003521/1-688 Len: 688 Check: 9541 Weight: 1.00 Name: ENSTTRP00000012486/1-665 Len: 688 Check: 8037 Weight: 1.00 Name: bmy_07148T0/1-346 Len: 688 Check: 7016 Weight: 1.00 Name: BACU016779/1-688 Len: 688 Check: 9289 Weight: 1.00 // 1 50 ENSP00000371101/1-688 MQVSSLNEVK IYSLSCGKSL PEWLSDRKKR ALQKKDVDVR RRIELIQDFE ENSBTAP00000003521/1-688 MQVSSLNEVK IYSLSCGKSL PEWLSDRKKR ALQKKDVDVR RRIELIQDFE ENSTTRP00000012486/1-665 ---------- ---------- --WLSDRKKR ALQKKDVDVR RRIELIQDFE bmy_07148T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU016779/1-688 MQVSSLNEVK IYSLSCGKSL PEWLSDRKKR ALQKKDVDVR RRIELIQDFE 51 100 ENSP00000371101/1-688 MPTVCTTIKV SKDGQYILAT GTYKPRVRCY DTYQLSLKFE RCLDSEVVTF ENSBTAP00000003521/1-688 MPTVCTTIKV SKDGQYILAT VSIRPRVRCY DTYQLSLKFE RCLDSEVVTF ENSTTRP00000012486/1-665 MPTVCTTIKV SKDGQYILAT GTYKPRVRCY DTYQLSLKFE RCLDSEVV-F bmy_07148T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU016779/1-688 MPTVCTTIKV SKDGQYILAT GTYKPRVRCY DTYQLSLKFE RCLDSEVVTF 101 150 ENSP00000371101/1-688 EILSDDYSKI VFLHNDRYIE FHSQSGFYYK TRIPKFGRDF SYHYPSCDLY ENSBTAP00000003521/1-688 ETLSDDYSKI VFLHNDRYIE FHSQSGFYYK TRIPKFGRDF SYHYPSCDLY ENSTTRP00000012486/1-665 ETLSDDYSKI VFLHNDRYIE FHSQSGFYYK TRIPKFGRDF SYHYPSCDLY bmy_07148T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU016779/1-688 ETLSDDYSKI VFLHNDRYIE FHSQSGFYYK TRIPKFGRDF SYHYPSCDLY 151 200 ENSP00000371101/1-688 FVGASSEVYR LNLEQGRYLN PLQTDAAENN VCDINSVHGL FATGTIEGRV ENSBTAP00000003521/1-688 FVGASSEVYR LNLEQGRYLN PLQTDAAENN VCDINSVHGL FATGTIEGRV ENSTTRP00000012486/1-665 FVGASSEVYR LNLEQGRFLN PLQTDAAENN VCDVNSVHGL FAAGTIEXXX bmy_07148T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU016779/1-688 FVGASSEVYR LNLEQGRFLN PLQTDAAENN VCDVNSVHGL FATGTIEGRV 201 250 ENSP00000371101/1-688 ECWDPRTRNR VGLLDCALNS VTADSEINSL PTISALKFNG ALTMAVGTTT ENSBTAP00000003521/1-688 ECWDPRTRGR VGVLDCALSS VTADSEINSL PTISALKFNG ALTMAVGTST ENSTTRP00000012486/1-665 XXXXXXXXXX XXXXXXXXXX XXXXXXINSL PTISALKFNG ALTMAVGTST bmy_07148T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU016779/1-688 ECWDPRTRGR VGLLDCALSS VTADSEINSL PTISALKFNG ALTMAVGTST 251 300 ENSP00000371101/1-688 GQVLLYDLRS DKPLLVKDHQ YGLPIKSVHF QDSLDLILSA DSRIVKMWNK ENSBTAP00000003521/1-688 GQVLLYDLRS DKPLLVKDHQ YGLPIKSVHF QDSLDLILSA DSRIIKMWNK ENSTTRP00000012486/1-665 GQVLLYDLRS DKPLLVKDHQ YGLPIKSVHF QDSLDLILSA DSRIIKMWNK bmy_07148T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU016779/1-688 GQVLLYDLRS DKPLLVKDHQ YGLPIKSVHF QDSLDLILSA DSRIIKMWNK 301 350 ENSP00000371101/1-688 NSGKIFTSLE PEHDLNDVCL YPNSGMLLTA NETPKMGIYY IPVLGPAPRW ENSBTAP00000003521/1-688 NSGKIFTSLE PEHDLNDVCL YPSSGMLLTA NEAPKMGIYY IPVLGPAPRW ENSTTRP00000012486/1-665 NSGKIFTSLE PEHDINDVCL YPNSGMLLTA NETPKMGIYY IPVLGPAPRW bmy_07148T0/1-346 ---------- ---------- ---------- ---------- --VLGPAPRW BACU016779/1-688 NSGKIFTSLE PEHDINDVCL YPNSGMLLTA NETPKMGIYY IPVLGPAPRW 351 400 ENSP00000371101/1-688 CSFLDNLTEE LEENPESTVY DDYKFVTKKD LENLGLTHLI GSPFLRAYMH ENSBTAP00000003521/1-688 CSFLDNLTEE LEENPESTVY DDYKFVTKKD LENLGLTHLI GSPFLRAYMH ENSTTRP00000012486/1-665 CSFLDNLTEE LEENPESTVY DDYKFVTKKD LENLGLTHLI GSPFLRAYMH bmy_07148T0/1-346 CSFLDNLTEE LEENPESTVY DDYKFVTKKD LENLGLTHLI GSPFLRAYMH BACU016779/1-688 CSFLDNLTEE LEENPESTVY DDYKFVTKKD LENLGLTHLI GSPFLRAYMH 401 450 ENSP00000371101/1-688 GFFMDIRLYH KVKLMVNPFA YEEYRKDKIR QKIEETRAQR VQLKKLPKVN ENSBTAP00000003521/1-688 GFFMDIRLYH KVKLMLNPFA YEEYRKDKIR QKIEETRAQR VQLKKLPKVN ENSTTRP00000012486/1-665 GFFMDIRLYH RVKLMVNPFA FEEYRKDKIR QKIEETRAQR VQLKKLPKVN bmy_07148T0/1-346 GFFMDIRLYH KVKLMVNPFA FEEYRKDKIR QKIEETRAQR VQLKKLPKVN BACU016779/1-688 GFFMDIRLYH KVKLMVNPFA FEEYRKDKIR QKIEETRAQR VQLKKLPKVN 451 500 ENSP00000371101/1-688 KELALKLIEE EEEKQKSTWK KKVKSLPNIL TDDRFKVMFE NPDFQVDEES ENSBTAP00000003521/1-688 KELALKLIEE EEEKQKSTWK KKVKSLPNIL TDDRFKVMFE NPDFQVDEES ENSTTRP00000012486/1-665 KELALKLIEE EEEKQRSTWK KKVKSLPNIL TDDRFKVMFE NPDFQVDEES bmy_07148T0/1-346 KELALKLIEE EEEKQKSTWK KKVKSLPNIL TDDRFKVMFE NPDFQVDEES BACU016779/1-688 KELALKLIEE EEEKQKSTWK KKVKNLPNIL TDDRFKVMFE NPDFQVDEES 501 550 ENSP00000371101/1-688 EEFRLLNPLV SKISEKRKKK LRLLEQQELR EKEEEEEPEG KPSDAESSES ENSBTAP00000003521/1-688 EEFRLLNPLV SKISEKRKKK LRLLEQQELH GKEEEEEPEG KPSDAESSES ENSTTRP00000012486/1-665 EEFRLLNPLV SKISEKRKKK LRLLEQQELH EKEEEEEPEG KPSDAESSES bmy_07148T0/1-346 EEFRLLNPLV SKLCEKRKKK LRLLEQQELH EKEEEEEPEG KPSDAESSES BACU016779/1-688 EEFRLLNPLV SKLCEKRKKK LRLLEQQELH EKEEEEEPEG KPSDAESSES 551 600 ENSP00000371101/1-688 SDDEKAWVEE VRKQRRLLQQ EEKVKRQERL KEDQQTVLKP QFYEIKAGEE ENSBTAP00000003521/1-688 SDDEKDWVAE VRKQRRLLQQ EEKVKRQEQL REDQQTVLKP QFYEIKAGEE ENSTTRP00000012486/1-665 SDDDKDWVAE VRKQRRLLQQ EEKVKRQERL REDRQTVLKP QFYEIKAGEE bmy_07148T0/1-346 SDDEKDWVAE VRKQRRLLQQ EEKVKRQERL REDRQTVLKP QFYEIKAGEE BACU016779/1-688 SDDEKAWVAE VRKQRRLLQQ EEKVKRQERL REDRQTVLKP QFYEIKAGEE 601 650 ENSP00000371101/1-688 FRSFKDSATK QKLMNKTLED RLKIEAKNGT LSVSDTTVGS KQLTFTLKRS ENSBTAP00000003521/1-688 FRSFKDSATK QKLMNKTLED RLKLEAKNGT LSVSDTTVGS KQLTFTLKKS ENSTTRP00000012486/1-665 FRSFRDSATK QKLMNKTLED RLKLEAKNGT LSVSDTTVGS KQLTFTLKKS bmy_07148T0/1-346 FRSFRDSATK QKLMNKTLED RLKLEAKNGT LSVSDTTVGS KQLTFTLKKS BACU016779/1-688 FRSFRDSATK QKLMNKTLED RLKLEAKNGT LSVSDTTVGS KQLTFTLKKS 651 700 ENSP00000371101/1-688 EQQKKQQEAE KLHRQERKRL RRSAGHLKSR HKRGRSFH ENSBTAP00000003521/1-688 EQQKKQQEAE KLHRQERKAV RRSAGHLRSR PRRGRPFH ENSTTRP00000012486/1-665 EQQKQQQEAA KLHRQERKTL RRSAGHLKSR PRRGRPFH bmy_07148T0/1-346 EQQKKQQEAE KLHRQERKTL RRSAGHLRSR PRRGRPFH BACU016779/1-688 EQQKQQQEAE KLHRQERKTL RRSAGHLRSR PRRGRPFH