KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:11 2014 Check: 00 .. Name: ENSTTRP00000012868/1-824 Len: 831 Check: 3900 Weight: 1.00 Name: bmy_10256T0/1-773 Len: 831 Check: 1647 Weight: 1.00 Name: BACU006148/1-773 Len: 831 Check: 675 Weight: 1.00 Name: ENSP00000434614/1-830 Len: 831 Check: 1171 Weight: 1.00 Name: ENSBTAP00000003533/1-825 Len: 831 Check: 7090 Weight: 1.00 // 1 50 ENSTTRP00000012868/1-824 MTVLQEPVQA AIWQALNHYA YRDAVFLAER LYAEVHSEEA LFLLATCYYR bmy_10256T0/1-773 -MFFFLHLQA AIWQALNHYA FRDAVFLAER LYAEVHSEEA LFLLATCYYR BACU006148/1-773 -MFFFLHLQA AIWQALNHYA FRDAVFLAER LYAEVHSEEA LFLLATCYYR ENSP00000434614/1-830 MTVLQEPVQA AIWQALNHYA YRDAVFLAER LYAEVHSEEA LFLLATCYYR ENSBTAP00000003533/1-825 MTVLQEPVQA AIWQALNHYA YRDAVFLAER LYAEVHSEEA LFLLATCYYR 51 100 ENSTTRP00000012868/1-824 SGKAYKAYRL LKGHSCTTPQ CKYLLAKCCV DLSKLAEGEQ ILSGGVFNKQ bmy_10256T0/1-773 SGKAYKAYRL LKGHSCTTPQ CKYLLAKCCV DLSKLAEGEQ ILSGGVFNKQ BACU006148/1-773 SGKAYKAYRL LKGHSCTTPQ CKYLLAKCCV DLSKLAEGEQ ILSGGVFNKQ ENSP00000434614/1-830 SGKAYKAYRL LKGHSCTTPQ CKYLLAKCCV DLSKLAEGEQ ILSGGVFNKQ ENSBTAP00000003533/1-825 SGKAYKAYRL LKGHSCTTPQ CKYLLAKCCV DLSKLAEGEQ ILSGGVFNKQ 101 150 ENSTTRP00000012868/1-824 KSHDDIVTEF GDSACFTLSL LGHVYCKTDR LAKGSECYQK SLSLNPFLWS bmy_10256T0/1-773 KSHDDIVTEF GDSACFTLSL LGHVYCKTDR LAKGSECYQK SLSLNPFLWS BACU006148/1-773 KSHDDIVTEF GDSACFTLSL LGHVYCKTDR LAKGSECYQK SLSLNPFLWS ENSP00000434614/1-830 KSHDDIVTEF GDSACFTLSL LGHVYCKTDR LAKGSECYQK SLSLNPFLWS ENSBTAP00000003533/1-825 KSHDDIVTEF GDSACFTLSL LGHVYCKTDR LAKGSECYQK SLSLNPFLWS 151 200 ENSTTRP00000012868/1-824 PFESLCEIGE KPDPDQTFKL TSLQNFSSCL PNSCTTLVSN HSLSHRQPET bmy_10256T0/1-773 PFESLCEIGE KPDPDQTFKL TSLQNFSSCL PNSCTTLVSN HSLSHRQPET BACU006148/1-773 PFESLCEIGE KPDPDQTFKL TSLQNFSSCL PNSCTTLVSN HSLSHRQPET ENSP00000434614/1-830 PFESLCEIGE KPDPDQTFKF TSLQNFSNCL PNSCTTQVPN HSLSHRQPET ENSBTAP00000003533/1-825 PFESLCEIGE KPDPDQTFKL TSLQNFSSCL PNSCTTLVSN HSLSHRQPET 201 250 ENSTTRP00000012868/1-824 VLTETPQDTI ELNRLNLESS NSKYSLNTDS SVSYIDSAVI SPDTVPLGTG bmy_10256T0/1-773 VLTETPQDTI ELNRLNLESS NSKYSLNTDS SVSYIDSAVI SPDTVPLGTG BACU006148/1-773 VLTETPQDTI ELNRLNLESS NSKYALNTDS SVSYIDSAVI SPDTVPLGTG ENSP00000434614/1-830 VLTETPQDTI ELNRLNLESS NSKYSLNTDS SVSYIDSAVI SPDTVPLGTG ENSBTAP00000003533/1-825 VLTETPQDTI ELNRLNLESS NSKYSLNTDS SVSYIDSAVI SPDTVPLGTG 251 300 ENSTTRP00000012868/1-824 TSILSKQVQN KPKTGRSLLG GPAALSPLTP SFGILPLETP SPGDGSYLQN bmy_10256T0/1-773 TSILSKQVQN KPKTGRSLLG GPAALSPLTP SFGILPLETP SPGDGSYLQN BACU006148/1-773 TSILSKQVQN KPKTGRSLLG GPAALSPLTP SFGILPLETP SPGDGSYLQN ENSP00000434614/1-830 TSILSKQVQN KPKTGRSLLG GPAALSPLTP SFGILPLETP SPGDGSYLQN ENSBTAP00000003533/1-825 TSILSKQVQN KPKTGRSLLG GPAALSPLTP SFGILPLETP SPGDGSYLQN 301 350 ENSTTRP00000012868/1-824 YTNTSSVIDV PSTGAPSKK- -----SVARI GQTGTKSVFS QSGNSREVTP bmy_10256T0/1-773 YTNTSSVIDV PSTGAPSKK- -----SVARI GQTGTKSVFS QSGNSREVTP BACU006148/1-773 YTNTSSVIDV PSTGAPSKK- -----SVARI GQTGTKSVFS QSGNSREVTP ENSP00000434614/1-830 YTNTPPVIDV PSTGAPSKKT FRVLQSVARI GQTGTKSVFS QSGNSREVTP ENSBTAP00000003533/1-825 YTNTSSVIDV PPTGAPSKK- -----SVARI GQTGTKSVFS QSGNSREVTP 351 400 ENSTTRP00000012868/1-824 ILVAQTQSSG PQTSTTPQVL SPTITSPPNA LPRRSSRLFI SDSFTTKENS bmy_10256T0/1-773 ILVAQTQSSG PQTSTTPQVL SPTITSPPNA LPRRSSRLFT SDSSTTKENS BACU006148/1-773 ILVAQTQSSG PQTSTTPQVL SPTITSPPNA LPRRSSRLFT SDSSTTKENS ENSP00000434614/1-830 IL-AQTQSSG PQTSTTPQVL SPTITSPPNA LPRRSSRLFT SDSSTTKENS ENSBTAP00000003533/1-825 ILVAQTQSSG PQTSTTPQVL SPTITSPPNA LPRRSSRLFT SDSSTTKENS 401 450 ENSTTRP00000012868/1-824 KKLKMKFPPK IPNRKTKSKT NKGGITQPNI NDSLEITKLD SAIISEGKIS bmy_10256T0/1-773 KKLKMKFPPK IPNRKTKSKT NKGGITQPNI NDSLEITKLD SAIISEGKIS BACU006148/1-773 KKLKMKFPPK IPNRKTKSKT NKGGITQPNI NDSLEITKLD SAIISEGKIS ENSP00000434614/1-830 KKLKMKFPPK IPNRKTKSKT NKGGITQPNI NDSLEITKLD SSIISEGKIS ENSBTAP00000003533/1-825 KKLKMKFPPK IPNRKTKSKT NKGGITQPNI NDSLEITKLD SSIISEGKIS 451 500 ENSTTRP00000012868/1-824 TITPQIQAFN LQKAAAEGLM SLLREMGKGY LALCSYNCKE AINILSHLPS bmy_10256T0/1-773 TITPQIQAFN LQKAAAEGLM SLLREMGKGY LALCSYNCKE AINILSHLPS BACU006148/1-773 TITPQIQAFN LQKAAAEGLM SLLREMGKGY LALCSYNCKE AINILSHLPS ENSP00000434614/1-830 TITPQIQAFN LQKAAAEGLM SLLREMGKGY LALCSYNCKE AINILSHLPS ENSBTAP00000003533/1-825 TITPQIQAFN LQKAAAEGLM SLLREMGKGY LALCSYNCKE AINILSHLPS 501 550 ENSTTRP00000012868/1-824 HHYNTGWVLC QIGRAYFELS EYMQAERIFS EVRRIENYRV EGMEIYSTTL bmy_10256T0/1-773 HHYNTGWVLC QIGRAYFELS EYMQ------ ---------- ---------- BACU006148/1-773 HHYNTGWVLC QIGRAYFELS EYMQ------ ---------- ---------- ENSP00000434614/1-830 HHYNTGWVLC QIGRAYFELS EYMQAERIFS EVRRIENYRV EGMEIYSTTL ENSBTAP00000003533/1-825 HHYNTGWVLC QIGRAYFELS EYMQAERIFS EVRRIENYRV EGMEIYSTTL 551 600 ENSTTRP00000012868/1-824 WHLQKDVALS VLSKDLTDMD KNSPEAWCAA GNCFSLQREH DIAIKFFQRA bmy_10256T0/1-773 ---------- ---------- -----AWCAA GNCFSLQREH DIAIKFFQRA BACU006148/1-773 ---------- ---------- -----AWCAA GNCFSLQREH DIAIKFFQRA ENSP00000434614/1-830 WHLQKDVALS VLSKDLTDMD KNSPEAWCAA GNCFSLQREH DIAIKFFQRA ENSBTAP00000003533/1-825 WHLQKDVALS VLSKDLTDMD KNSPEAWCAA GNCFSLQREH DIAIKFFQRA 601 650 ENSTTRP00000012868/1-824 IQVDPNYAYA YTLLGHEFVL TEELDKALAC FRNAIRVNPR HYNAWYGLGM bmy_10256T0/1-773 IQVDPNYAYA YTLLGHEFVL TEELDKALAC FRNAIRVNPR HYNAWYGLGM BACU006148/1-773 IQVDPNYAYA YTLLGHEFVL TEELDKALAC FRNAIRVNPR HYNAWYGLGM ENSP00000434614/1-830 IQVDPNYAYA YTLLGHEFVL TEELDKALAC FRNAIRVNPR HYNAWYGLGM ENSBTAP00000003533/1-825 IQVDPNYAYA YTLLGHEFVL TEELDKALAC FRNAIRVNPR HYNAWYGLGM 651 700 ENSTTRP00000012868/1-824 IYYKQEKFSL AEMHFQKALD INPQSSVLLC HIGVVQHALK KSEKALDTLN bmy_10256T0/1-773 IYYKQEKFSL AEMHFQKALD INPQSSVLLC HIGVVQHALK KSEKALDTLN BACU006148/1-773 IYYKQEKFSL AEMHFQKALD INPQSSVLLC HIGVVQHALK KSEKALDTLN ENSP00000434614/1-830 IYYKQEKFSL AEMHFQKALD INPQSSVLLC HIGVVQHALK KSEKALDTLN ENSBTAP00000003533/1-825 IYYKQEKFSL AEMHFQKALD INPQSSVLLC HIGVVQHALK KSEKALDTLN 701 750 ENSTTRP00000012868/1-824 KAIVIDPKNP LCKFHRASVL FANEKYKXXX XXXXXXXXXX XXXXXXXXXX bmy_10256T0/1-773 KAIVIDPKNP LCKFHRASVL FANEKYKSAL QELEELKQIV PKESLVYFLI BACU006148/1-773 KAIVIDPKNP LCKFHRASVL FANEKYKSAL QELEELKQIV PKESLVYFLI ENSP00000434614/1-830 KAIVIDPKNP LCKFHRASVL FANEKYKSAL QELEELKQIV PKESLVYFLI ENSBTAP00000003533/1-825 KAIVIDPKNP LCKFHRASVL FANEKYKSAL QELEELKQIV PKESLVYFLI 751 800 ENSTTRP00000012868/1-824 XXVYKKLGQT HLALMNFSWA MDLDPKGANN QIKEAIDKRY LPDDEEPITQ bmy_10256T0/1-773 GKVYKKLGQT HLALMNFSWA MDLDPKGANN QIKEAIDKRY LPDDEEPITQ BACU006148/1-773 GKVYKKLGQT HLALMNFSWA MDLDPKGANN QIKEAIDKRY LPDDEEPITQ ENSP00000434614/1-830 GKVYKKLGQT HLALMNFSWA MDLDPKGANN QIKEAIDKRY LPDDEEPITQ ENSBTAP00000003533/1-825 GKVYKKLGQT HLALMNFSWA MDLDPKGANN QIKEAIDKRY LPDDEEPITQ 801 850 ENSTTRP00000012868/1-824 EEQIMGTDES -ESSMTDADD TQLHAAESDE F bmy_10256T0/1-773 EEQIMGTDES QESSMTDADD TQLHAAESDE F BACU006148/1-773 EEQIMGTDES QESSMTDADD TQLHAAESDE F ENSP00000434614/1-830 EEQIMGTDES QESSMTDADD TQLHAAESDE F ENSBTAP00000003533/1-825 EEQIMGTDES QESSMTDADD TQLHAAESDE F