KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:13 2014 Check: 00 .. Name: BACU015272/1-492 Len: 1289 Check: 8351 Weight: 1.00 Name: ENSTTRP00000002753/1-547 Len: 1289 Check: 902 Weight: 1.00 Name: ENSP00000256398/1-547 Len: 1289 Check: 3167 Weight: 1.00 Name: bmy_05841T0/1-1062 Len: 1289 Check: 1672 Weight: 1.00 Name: ENSBTAP00000003541/1-547 Len: 1289 Check: 4206 Weight: 1.00 // 1 50 BACU015272/1-492 MRQKRKGDLS PAELMMLTIG DVIKQLIEAH EQGKDIDLNK VKTRTAAKYG ENSTTRP00000002753/1-547 MRQNRKGDLS PAELMMLTIG DVIKQLIEAH EQGKDIDLNK VKTRTAAKYG ENSP00000256398/1-547 MRQKRKGDLS PAELMMLTIG DVIKQLIEAH EQGKDIDLNK VKTKTAAKYG bmy_05841T0/1-1062 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003541/1-547 MRQKRKGDLS PAQLMMLTIG DVIKQLIEAH EQGKDIDLNK VKTRTAAKYG 51 100 BACU015272/1-492 LSAQPRLVDI IAAVPPQYRK VLVPKLKAKP IRTASGLVAY KIDTYKR--- ENSTTRP00000002753/1-547 LSAQPRLVDI IAAVPPQYRK VLVPKLKAKP IRTASGIAVV AVMCKPHRCP ENSP00000256398/1-547 LSAQPRLVDI IAAVPPQYRK VLMPKLKAKP IRTASGIAVV AVMCKPHRCP bmy_05841T0/1-1062 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003541/1-547 LSAQPRLVDI IAAVPPQYRK VLVPKLKAKP IRTASGIAVV AVMCKPHRCP 101 150 BACU015272/1-492 ---------- YCPGGPDSDF EYSTQSYTGY EPTSMRAIRA RYDPYLQTRH ENSTTRP00000002753/1-547 HISFTGNICV YCPGGPDSDF EYSTQSYTGY EPTSMRAIRA RYDPYLQTRH ENSP00000256398/1-547 HISFTGNICV YCPGGPDSDF EYSTQSYTGY EPTSMRAIRA RYDPFLQTRH bmy_05841T0/1-1062 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003541/1-547 HISFTGNICV YCPGGPDSDF EYSTQSYTGY EPTSMRAIRA RYDPYLQTRH 151 200 BACU015272/1-492 RIEQLKQLGH SVDKVEFIVM GGTFMALPEE YRDYFIRNLH DALSGHTSNN ENSTTRP00000002753/1-547 RIEQLKQLGH SVDKVEFIVM GGTFMALPEE YRDYFIRNLH DALSGHTSNN ENSP00000256398/1-547 RIEQLKQLGH SVDKVEFIVM GGTFMALPEE YRDYFIRNLH DALSGHTSNN bmy_05841T0/1-1062 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003541/1-547 RIEQLKQLGH SVDKVEFIVM GGTFMALPEE YRDYFIRNLH DALSGHTSNN 201 250 BACU015272/1-492 IYEAV----- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 IYEAVKYSER SLTKCIGITI ETRPDYCMKR HLSDMLTYGC TRLEIGVQSV ENSP00000256398/1-547 IYEAVKYSER SLTKCIGITI ETRPDYCMKR HLSDMLTYGC TRLEIGVQSV bmy_05841T0/1-1062 ---------- ---------- -------MKR HLSDMLTYGC TRLEIGVQSV ENSBTAP00000003541/1-547 IYEAVKYSER SLTKCIGITI ETRPDYCMKR HLSDMLTYGC TRLEIGVQSV 251 300 BACU015272/1-492 ---------K GHTVKAVCES FHLAKDSGFK VVAHMMPDLP NVGLERDIEQ ENSTTRP00000002753/1-547 YEDVARDTNR XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000256398/1-547 YEDVARDTNR GHTVKAVCES FHLAKDSGFK VVAHMMPDLP NVGLERDIEQ bmy_05841T0/1-1062 YEDVARDTNR GHTVKAVCES FHLAKDSGFK VVAHMMPDLP NVGLERDIEQ ENSBTAP00000003541/1-547 YEDVARDTNR GHTVKAVCES FHLAKDSGFK VVAHMMPDLP NVGLERDIEQ 301 350 BACU015272/1-492 FT-------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 XX-------- ---------- --EFFENPAF RPDGLKLYPT LVIRGTGLYE ENSP00000256398/1-547 FT-------- ---------- --EFFENPAF RPDGLKLYPT LVIRGTGLYE bmy_05841T0/1-1062 FTTAPGCLSP LFCRSKGAFS SIEFFENPAF RPDGLKLYPT LVIRGTGLYE ENSBTAP00000003541/1-547 FT-------- ---------- --EFFENPAF RPDGLKLYPT LVIRGTGLYE 351 400 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 LWKSGRYKSY SPSDLIELVA RILALVPPWT RVYRVQ---- ---------- ENSP00000256398/1-547 LWKSGRYKSY SPSDLVELVA RILALVPPWT RVYRVQ---- ---------- bmy_05841T0/1-1062 LWKSGRYKSY SPSDLIELVA RILALVPPWT RVYRVQRMLS VDREDGNDRT ENSBTAP00000003541/1-547 LWKSGRYKSY SPSDLIELVA RILALVPPWT RVYRVQ---- ---------- 401 450 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 ARPSLFASIT FIHMFISPFM SQEMEDDGKW AWCLVPGACD LHQRFLFQIC ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 451 500 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 SNPDTLKKFR SYKVTYLPTI LTKPFLYFLV VKAHFHHPAK NCRDSSITVQ ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 501 550 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 KTLGGAEQRR HPHEGHREPQ GPEHGEKGVL GEEVVVWFRL LQARCVRKAF ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 551 600 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 SLRADLAPDV RAQQGKEDVS EGLYEIPLWD IILAYHQLKK RGFRENRSSK ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 601 650 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- -------RDI PMPLVSSGVE HGNLRELAFA ENSP00000256398/1-547 ---------- ---------- -------RDI PMPLVSSGVE HGNLRELALA bmy_05841T0/1-1062 YNLYRKIYPC LTARMTYILQ QLMFFSYRDI PMPLVSSGVE HGNLRELAFA ENSBTAP00000003541/1-547 ---------- ---------- -------RDI PMPLVSSGVE HGNLRELAFA 651 700 BACU015272/1-492 --------CR DVRTREVGIQ EIHHKVRPYQ ---------- ---------- ENSTTRP00000002753/1-547 RMKDLGIQCR DVRTREVGIQ EIHHKVRPYQ -----VELVR RDYVANGGWE ENSP00000256398/1-547 RMKDLGIQCR DVRTREVGIQ EIHHKVRPYQ -----VELVR RDYVANGGWE bmy_05841T0/1-1062 RMKDLGIQCR DVRTREVGIQ EIHHKVRPYQ VLVEEVELVR RDYVANGGWE ENSBTAP00000003541/1-547 RMKDLGIQCR DVRTREVGIQ EIHHKVRPYQ -----VELVR RDYVANGGWE 701 750 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 TFLSYEDPDQ DILIGLLRLR KCSEETFRFE LVGGVSIVRE LHVYGSVVPV ENSP00000256398/1-547 TFLSYEDPDQ DILIGLLRLR KCSEETFRFE LGGGVSIVRE LHVYGSVVPV bmy_05841T0/1-1062 TFLSYEDPDQ DILIGLLRLR KCSEETFRFE LVGGVSIVRE LHVYGSVVPV ENSBTAP00000003541/1-547 TFLSYEDPDQ DILIGLLRLR KCSEETFRFE LVGGVSIVRE LHVYGSVVPV 751 800 BACU015272/1-492 ---------- -GFGMLLMEE AERIAREEHG SGKIAVI--- ---------- ENSTTRP00000002753/1-547 SSRDPTKFQH QGFGMLLMEE AERIAREEHG SGKIAVI--- ---------- ENSP00000256398/1-547 SSRDPTKFQH QGFGMLLMEE AERIAREEHG SGKIAVI--- ---------- bmy_05841T0/1-1062 SSRDPTKFQH QGFGMLLMEE AERIAREEHG SGKIAVISVP QASLAPIYDY ENSBTAP00000003541/1-547 SSRDPTKFQH QGFGMLLMEE AERIAREEHG SGKIAVI--- ---------- 801 850 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 YVQNCAEPNR ERLVLKHKET SCKQFGGIEL AEALHLLSGK ASNLYPVFLV ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 851 900 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 LLCLGKMKFD DTDLRKLFPL FGSFPLTLPR TSDKWRSGRV KEGLLLWLTR ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 901 950 BACU015272/1-492 ---------- ---------- ---------- --SGKMCLF- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 SQPFLVPGKG QTDSELFFLN QTSEVSIIQN FKEGRFKVFF IMCFLAEASD ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 951 1000 BACU015272/1-492 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 TSRYADTGGT GFEFGTCCCS SHEHAVKSSC VSETCRSIRG RALADSSRLG ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 1001 1050 BACU015272/1-492 ---------- ---------- ---------- ---SASKLYS GVGFIPLERK ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 EQTINRRDPS SYQIPGVDMI YQTKNTEKLD TDRGASKLYS GVGFIPLERK ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 1051 1100 BACU015272/1-492 GCSNVEKQSF TAKSGHPEDC CTEVTAARPP AQGLAESHAG EQGLAPGIIT ENSTTRP00000002753/1-547 ---------- ---SGVGTRN YYRKIGYRLQ GPYMVKNLK- ---------- ENSP00000256398/1-547 ---------- ---SGVGTRN YYRKIGYRLQ GPYMVKMLK- ---------- bmy_05841T0/1-1062 GCSNVEKQSF TAKSGVGTRN YYRKIGYRLQ GPYMGKNVFS QLTFKEDTSI ENSBTAP00000003541/1-547 ---------- ---SGVGTRN YYRKIGYRLQ GPYMVKTLE- ---------- 1101 1150 BACU015272/1-492 ERSATDCKDH YDPSRLP--W AQTTFYVRHL SVTRLSCTFL YLCFSLPQGP ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 EQRGCAFLLF HPHNRQPPHS SMTGFCVPPC GSSPPSPSIL HLLPAFQEVG ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 1151 1200 BACU015272/1-492 VLVQCLGSEQ TLNNLVWRSA GLSENHSPEQ GKALSEKWT- ---------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 KEQPACGLAL PQQRRQHLRL GASPITQNAK LCVTERRWSV NVLSSRSEVT ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 1201 1250 BACU015272/1-492 ---------- ----SALCFP FQRQFRIRFC ALSPIQQLPL PAKPKSAVTF ENSTTRP00000002753/1-547 ---------- ---------- ---------- ---------- ---------- ENSP00000256398/1-547 ---------- ---------- ---------- ---------- ---------- bmy_05841T0/1-1062 VPYLISPDGS YCFRSDSSTA QALQGRLSSC FRADLVCELL PDTARAAGPY ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------- ---------- 1251 1300 BACU015272/1-492 SPTQCSPETG CH-------- ---------- --------- ENSTTRP00000002753/1-547 ---------- ---------- ---------- --------- ENSP00000256398/1-547 ---------- ---------- ---------- --------- bmy_05841T0/1-1062 NERQNGSSSR VYEEGAIQVG YPDSGRWTWI LNLSSSRSG ENSBTAP00000003541/1-547 ---------- ---------- ---------- ---------