KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:13 2014 Check: 00 .. Name: ENSP00000227256/1-382 Len: 390 Check: 4268 Weight: 1.00 Name: ENSBTAP00000003543/1-345 Len: 390 Check: 6017 Weight: 1.00 Name: BACU005596/1-349 Len: 390 Check: 335 Weight: 1.00 Name: bmy_09655T0/1-345 Len: 390 Check: 5876 Weight: 1.00 Name: ENSTTRP00000000299/1-379 Len: 390 Check: 5801 Weight: 1.00 // 1 50 ENSP00000227256/1-382 MMFPGLLAPP AGYPSLLRPT PTLTLPQSLQ SAFSGHSSFL VEDLIRISRP ENSBTAP00000003543/1-345 MMFPGLLAPP AGYPSLLRPT PTLTLPQSLQ SAFSGHSSFL VEDLIRISRP BACU005596/1-349 MMFPGLLAPP AGYPSLLRPT PTLTLPQSLQ SAFSGHSSFL VEDLIRISRP bmy_09655T0/1-345 MMFPGLLAPP AGYPSLLRPT PTLTLPQSLQ SAFSGHSSFL VEDLIRISRP ENSTTRP00000000299/1-379 MMFPGLLAPP AGYPSLLRPT PTLTLPQSLQ SAFSGHSSFL VEDLIRISRP 51 100 ENSP00000227256/1-382 PAYLPR-SVP TASMSPPRQG APTALTDTGA SDLGSPGPGS RRGGSPPTAF ENSBTAP00000003543/1-345 PAYLPRGSVP TPSMSPPRPG APAALTDTGA SDLGSPGPGS RRGGSPQTAV BACU005596/1-349 PAYLPR-SVP TASMSPPRQG APAALTDTGA SDLGSPGPGS RRGGSPQTAV bmy_09655T0/1-345 PAYLPR-SVP TASMSPPRQG APAALTDTGA SDLGSPGPGS RRGGSPQTAI ENSTTRP00000000299/1-379 PAYLPR-SVP TASMSPPRQG APAALTDTGA SDLSSPGPGS RRGGSPQTAV 101 150 ENSP00000227256/1-382 SPASETTFLK FGVNAILSSG PRTETSPALL QSVPPKTFAF P----YFEGS ENSBTAP00000003543/1-345 SPASEPTFLK FGVNAILSSA PRTETSPTLL QSVPPKTFAF P----YFEGS BACU005596/1-349 SPASEPTFLK FGVNAILSSA PRTETSPALL QSVPPKTFVF PXXXXXFEGS bmy_09655T0/1-345 SPASEPTFLK FGVNAILSSA PRTETSPALL QSVPPKTFAF P----YFEGS ENSTTRP00000000299/1-379 SPASEPTFLK FGVNAILSSA PRTETSPALL QSVPPKTFAF P----YFEGS 151 200 ENSP00000227256/1-382 FQPFIRSSYF PASSSVVPIP GTFSWPLAAR GKPRRGMLRR AVFSDVQRKA ENSBTAP00000003543/1-345 FQPFIRSSYF PASSSVVPIP GTFSWPLAAR GKPRRGMLRR AVFSDVQRKA BACU005596/1-349 FQPFIRSSYF PASSSVVPIP GTFSWPLAAR GKPRRGMLRR AVFSDVQRKA bmy_09655T0/1-345 FQPFIRSSYF PASSSVVPIP GTFSWPLAAR GKPRRGMLRR AVFSDVQRKA ENSTTRP00000000299/1-379 FQPFIRSSYF PASSSVVPIP GTFSWPLAAR GKPRRGMLRR AVFSDVQRKA 201 250 ENSP00000227256/1-382 LEKMFQKQKY ISKPDRKKLA AKLGLKDSQD TARRTEPAPD STPRPRASPG ENSBTAP00000003543/1-345 LEKMFQKQKY ISKPDRKKLA AKLGLKDS-- ---------- ---------- BACU005596/1-349 LEKMFQKQKY ISKPDRKKLA AKLGLKDS-- ---------- ---------- bmy_09655T0/1-345 LEKMFQKQKY ISKPDRKKLA AKLGLKDS-- ---------- ---------- ENSTTRP00000000299/1-379 LEKMFQKQKY ISKPDRKKLA SKLGLKDSQG KEGRTGPP-- --SHPLGAGG 251 300 ENSP00000227256/1-382 APDLTSASPF FSPAGTFQVK IWFQNRRMKW RNSKERELLS SGGCREQTLP ENSBTAP00000003543/1-345 ---------- -------QVK IWFQNRRMKW RNSKERELLS SGGCREQTLP BACU005596/1-349 ---------- -------QVK IWFQNRRMKW RNSKERELLS SGGCREQTLP bmy_09655T0/1-345 ---------- -------QVK IWFQNRRMKW RNSKERELLS SGGCREQTLP ENSTTRP00000000299/1-379 GSALTAASPL LSPLSP-QVK IWFQNRRMKW RNSKERELLS SGGCREQTLP 301 350 ENSP00000227256/1-382 TKLNPHPDLS DVGQKGPG-- NEEEEEGPGS PSHRLAYH-A SSDPQHLRDP ENSBTAP00000003543/1-345 TKLNPHPDLS DVGQKGPGDD DDEEDEGPGS PRPRLVYHAA PADPRHLRDP BACU005596/1-349 TKLNPHPDLS DVGQKGPGDD DEEEDEGPGS LRRRLAYHHP SSDPRHLRDP bmy_09655T0/1-345 TKLNPHPDLS DVGQKGPGDD DEEEDEGPGS LRHRLVYHHP SPDPRHLRDP ENSTTRP00000000299/1-379 TKLNPHPDLS DVGQKGPGDD DDEEDEGPGS LRHRLVYHHP SPDPRHLRDP 351 400 ENSP00000227256/1-382 RLPGPLPPSP AHSSSPGKPS DFSDSEEEEE GEEQEEITVS ENSBTAP00000003543/1-345 RLEAPLPTSP ARSGSPDKAS DFSDSEDDEE GE--EEITVS BACU005596/1-349 RLEGPLPHSP AHSGSPDKPS DFSDSEEDEE GEE-EEITVS bmy_09655T0/1-345 RLEGPLPHSP AHSGSPDKPS DFSDSEEDEE GEE-EEITVS ENSTTRP00000000299/1-379 RLEGPLPHSP AHSGSPDKPS DFSDSEEDEE AEE-EEITVS