KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:14 2014 Check: 00 .. Name: ENSP00000324763/1-548 Len: 591 Check: 5494 Weight: 1.00 Name: ENSBTAP00000003547/1-550 Len: 591 Check: 2276 Weight: 1.00 Name: ENSTTRP00000008750/1-550 Len: 591 Check: 4834 Weight: 1.00 Name: bmy_01878T0/1-588 Len: 591 Check: 582 Weight: 1.00 Name: BACU009254/1-549 Len: 591 Check: 9566 Weight: 1.00 // 1 50 ENSP00000324763/1-548 MPALRPLLPL LLLLRLTSGA GLLPGLGSHP GVCPNQLSPN LWVDAQSTCE ENSBTAP00000003547/1-550 MPALRPLRLL LLLAGLTAGA SLPPGPGGHP GVCPNQLSPN LWVDAQSTCE ENSTTRP00000008750/1-550 MPALRPLLLL LLLVGLTAGA SLPPGPRSHP GVCPNQLSPN LWVDAQSTCE bmy_01878T0/1-588 MPALRPLLLL LLLVGLTAGA SLPPGPGSHP GVCPNQLSPN LWVDAQSTCE BACU009254/1-549 MPALRPLLLL LLLVGLTAGA SLPPGPGSHP GVCPNQLSPN LWVDAQSTCE 51 100 ENSP00000324763/1-548 RECSRDQDCA AAEKCCINVC GLHSCVAARF P-GSPAAPTT AASCEGFVCP ENSBTAP00000003547/1-550 RECVGDQDCA ATEKCCTNVC GLQSCVAARF PDGGPAASRL AASCEGFVCA ENSTTRP00000008750/1-550 RECVRDQDCA ATEKCCTNVC GLQSCVAARF PDSGLATPKL AASCDGFVCP bmy_01878T0/1-588 RECVRDQDCT ATEKCCTNVC GLQSCVAARF PDSGLATPKL AASCDGFMCP BACU009254/1-549 RECVRDQDCA ATEKCCTNVC GLQSCVAARF PDGGLATPKL AASCDGFMCP 101 150 ENSP00000324763/1-548 QQGSDCDIWD GQPVCRCRDR CEKEPSFTCA SDGLTYYNRC YMDAEACLRG ENSBTAP00000003547/1-550 QQGSDCDIWD GQPVCRCRDR CEKEPSFTCA SDGLTYYNRC YMDAEACLRG ENSTTRP00000008750/1-550 QQGSDCDIWD GQPVCRCRDR CEKEPSFTCA SDGLTYYNRC YMDAEACLRG bmy_01878T0/1-588 QQGSDCDIWD GQPVCRCRDR CEKEPSFTCA SDGLTYYNRC YMDAEACLRG BACU009254/1-549 QQGSDCDIWD GQPVCRCRDR CEKEPSFTCA SDGLTYYNRC YMDAEACLRG 151 200 ENSP00000324763/1-548 LHLHIVPCKH VLSWPPSSPG PPETTARPTP GAAPVPPALY SSPSPQAVQV ENSBTAP00000003547/1-550 LRLRVVPCKH VLSWPPSSPR PPETTARPTP GDAPVPPALY SSPSPQAVYV ENSTTRP00000008750/1-550 LRLHVVPCKH VLSRPPSSPG PPETTARPTP GDALVPPALY SSPSPQAVYV bmy_01878T0/1-588 LRLHVVPCKH VLSRPPSSLG PPETTARPTP GDALVPPALY SSPSPQAVYV BACU009254/1-549 LRLHVVPCKH VLSRPPSSLG PPETTARPTP GDALVPPALY SSPSPQAVYV 201 250 ENSP00000324763/1-548 GGTASLHCDV SGRPPPAVTW EKQSHQRENL IMRPDQMYGN VVVTSIGQLV ENSBTAP00000003547/1-550 GGTASLHCDV SGRPPPAVTW EKQSDQRENL IMRPDQMYGN VVVTSIGQLV ENSTTRP00000008750/1-550 GGTASLHCDV SGRPPPAVTW EKQSDQRENL IMRPDQMYGN VVVTSIGQLV bmy_01878T0/1-588 GGTASLHCDV SGRPPPAVTW EKQSDQRENL IMRPDQMYGN VVVTSIGQLV BACU009254/1-549 GGTASLHCDV SGRPPPAVTW EKQSDQRENL IMRPDQMYGN VVVTSIGQLV 251 300 ENSP00000324763/1-548 LYNARPEDAG LYTCTARNAA GLLRADFPLS VVQREPARDA APSIP-APAE ENSBTAP00000003547/1-550 LYNARPEDAG LYTCTARNAA GLLRADFPLS VVQRDPAGAG AHEAANAPAQ ENSTTRP00000008750/1-550 LYNARPEDAG LYTCTARNAA GLLRADFPLS VVQREPAEDG APVAA-APAQ bmy_01878T0/1-588 LYNARLEDAG LYTCTARNAA GLLRADFPLS VVQREPAEDG APVAV-APAQ BACU009254/1-549 LYNARLEDAG LYTCTARNAA GLLRADFPLS VVQRELAEDR APVAV-APAQ 301 350 ENSP00000324763/1-548 CLPDVQACTG PTSPHLVLWH YDPQRGGCMT FPARGCDGAA RGFETYEACQ ENSBTAP00000003547/1-550 CLPSTQACVG PPSGR-VLWH FDPQRRGCMT FPVGSCAGGA QGFETYEACQ ENSTTRP00000008750/1-550 CLPTTQACVG TPSGQ-VLWH FDPQRGGCMT FPVGSCAGGA QGFETYEACQ bmy_01878T0/1-588 CLPTTQACVG TPSGQ-VLWH FDPQRGGCMT FPVGSCAGGA QGFETYEACQ BACU009254/1-549 CLPTTQTCVG TPSGQ-VLWH FDPQRGGCMT FPVGSCAGGA QGFETYEACQ 351 400 ENSP00000324763/1-548 QACARGPGDA CVLPAVQGPC RGWEPRWAYS PLLQQCHPFV YGGCEGNGNN ENSBTAP00000003547/1-550 QACARDPGDA CALPAVQGPC QGWEPRWAYS PLLQHCHPFE YSGCEGNGNN ENSTTRP00000008750/1-550 QACARGPRDA CVLPAVQGPC QGWEPRWAYS PLLQQCHPFE YSGCEGNGNN bmy_01878T0/1-588 QACARGPRDA CVLPAVQGPC QGWEPRWAYS PLLQQCHPFE YSGCEGNGNN BACU009254/1-549 QACARGPRDA CVLPAVQGPC QGWELCWAYS PLLQQCHPFE YSGCEGNGNN 401 450 ENSP00000324763/1-548 FHSRESCEDA CPVPRTPPCR ACRLRSKLAL SLCRSDFAIV GRLTEVLEEP ENSBTAP00000003547/1-550 FESRESCEHA CPVPRTPPCR ACRLRSKLAL SLCRSDFAIV GRLTEVLEEP ENSTTRP00000008750/1-550 FESRESCEDA CPVPRTPPCR ACRLRSKLAL SLCRSDFAIV GRLTEVLEEP bmy_01878T0/1-588 FESRESCEDA CPVPRTPPCR ACRLRSKLAL SLCRSDFAIV GRLTEVLEEP BACU009254/1-549 FESRESCEDA CPVPRTPPCR ACRLRSKLAL SLCRSDFAIV GRLTEVLEEP 451 500 ENSP00000324763/1-548 E--AAGGIAR VALEDVLKDD KMGLKFLGTK YLEVTLSGMD WACPCPNMTA ENSBTAP00000003547/1-550 E-AGGGGIAR VALDEVLKDD KMGLRLLGTK YLEVTLIGVD RACPCPNVTA ENSTTRP00000008750/1-550 EVGGGGGIAR VALDDVLKDD KMGLRLLGTK YLEVTLSGMD RACPCPNVTA bmy_01878T0/1-588 E-AGGGGIAR VALDDVLKDD KMGLRLLGTK YLEVTLSGMD RACPCPNVTA BACU009254/1-549 E-AGGGGIAR VALDDVLKDD KMGLRLLGTK YLEVTLSGMD RSCPCPNVTA 501 550 ENSP00000324763/1-548 GDGPLVIMGE VRDGVAVLDA GSYVRAASEK RVKKILELLE KQACELLNRF ENSBTAP00000003547/1-550 GDGPLVIMGE VRDGVAMLDA GSYVRAASEK RVKKISELLE RKACELLNRF ENSTTRP00000008750/1-550 GDSPLVIMGE VRDGVVMLDA GSYVRAASEK RIKKISELLE RKACELLNRF bmy_01878T0/1-588 GDSPLVIMGE VRDGVAMLDA GSYVRAASEK RVKKISELLE RKACELLNRF BACU009254/1-549 GDSPLVIMGE VRDGVAMLDA GSYVRAASEK RVKKISELLE RKACELLNRF 551 600 ENSP00000324763/1-548 QD-------- ---------- ---------- ---------- - ENSBTAP00000003547/1-550 QD-------- ---------- ---------- ---------- - ENSTTRP00000008750/1-550 QD-------- ---------- ---------- ---------- - bmy_01878T0/1-588 QDXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXSPPS A BACU009254/1-549 QD-------- ---------- ---------- ---------- -