KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:18 2014 Check: 00 .. Name: bmy_17594T0/1-507 Len: 944 Check: 7509 Weight: 1.00 Name: ENSP00000233146/1-934 Len: 944 Check: 9133 Weight: 1.00 Name: ENSBTAP00000003556/1-934 Len: 944 Check: 2394 Weight: 1.00 Name: BACU013887/1-934 Len: 944 Check: 1823 Weight: 1.00 Name: ENSTTRP00000004001/1-931 Len: 944 Check: 7933 Weight: 1.00 // 1 50 bmy_17594T0/1-507 ---------- ---------- --MEGHPST- ---------- -FYS------ ENSP00000233146/1-934 MAVQPKETLQ LESAAEVGFV RFFQGMPEKP TTTVRLFDRG DFYTAHGEDA ENSBTAP00000003556/1-934 MAVQPKDTLQ LDSAAEVGFV RFFQGMPEKP TTTVRLFDRG DFYTAHREDA BACU013887/1-934 MAVQPKETLQ LESAAEVGFV RFFQGMPEKP TTTVRLFDRG DFYTAHREDA ENSTTRP00000004001/1-931 MAVQPKETLQ LESAAEVGFV RFFQGMPEKP TTTVRLFDRG DFYTAHREDA 51 100 bmy_17594T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000233146/1-934 LLAAREVFKT QGVIKYMGPA GAKNLQSVVL SKMNFESFVK DLLLVRQYRV ENSBTAP00000003556/1-934 LLAAREVFKT QGVVKYMGPA GAKTLESVVL SKMNFESFVK DLLLVRQYRV BACU013887/1-934 LLAAREVFKT QGVVKYMGPA GAKTLESVVL SKMNFESFVK DLLLVRQYRV ENSTTRP00000004001/1-931 LLAAREVFKT QGVVKYMGPA GAKTVESVVL SKMNFESFVK DLLLVRQYRV 101 150 bmy_17594T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000233146/1-934 EVYKNRAGNK ASKENDWYLA YKASPGNLSQ FEDILFGNND MSASIGVVGV ENSBTAP00000003556/1-934 EVYKNRAGNK ASKENDWYLA FKASPGNLSQ FEDILFGNND MSASIGVVGV BACU013887/1-934 EVYKNRAGNK ASKENDWYLA FKASPGNLSQ FEDILFGNND MSASIGVVGV ENSTTRP00000004001/1-931 EVYKNRAGSK ASKENDWYLA FKASPGNLAQ FEDILFGNND MSASIGVVGV 151 200 bmy_17594T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000233146/1-934 KMSAVDGQRQ VGVGYVDSIQ RKLGLCEFPD NDQFSNLEAL LIQIGPKECV ENSBTAP00000003556/1-934 KMSTVDGQRQ VGVGYVDSTQ RKLGLCEFPD NDQFSNLEAL LIQIGPKECV BACU013887/1-934 KMSAVDGQRQ VGVGYVDSTQ RKLGLCEFPD NDQFSNLEAL LIQIGPKECV ENSTTRP00000004001/1-931 KMSTVDGQRQ VGVGYVDSIQ RKLGLCEFPD NDQFSNLEAL LIQIGPKECV 201 250 bmy_17594T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000233146/1-934 LPGGETAGDM GKLRQIIQRG GILITERKKA DFSTKDIYQD LNRLLKGKKG ENSBTAP00000003556/1-934 MPGGETAGDM GKLRQVIQRG GILITERKRA DFSTKDIYQD LNRLLKGKKG BACU013887/1-934 LPGGETAGDM GKLRQVIQRG GILITERKRA DFSTKDIYQD LNRLLKGKKG ENSTTRP00000004001/1-931 LPGGETAGDV GKLRQVIQRG GILITERKKA DFSTKDIYQD LNRLLKGKKG 251 300 bmy_17594T0/1-507 ---------- -------PAF CIVILF---- ---------- -------PYC ENSP00000233146/1-934 EQMNSAVLPE MENQVAVSSL SAVIKFLELL SDDSNFGQFE LTTFDFSQYM ENSBTAP00000003556/1-934 EQVNSAVLPE MENQVAVSSL SAVIKFLELL SDDSNFGQFE LTTFDFSQYM BACU013887/1-934 EQVNSAVLPE MENQVAVSSL CAVIKFLELL SDDSNFGQFE LTTFDFSQYM ENSTTRP00000004001/1-931 EQVNSAVLPE MENQVAVSSL CAVIKFLELL SDDSNFGQFE LTTFDFSQYM 301 350 bmy_17594T0/1-507 GVQF------ ---------- ---------- ---------- ----WY---- ENSP00000233146/1-934 KLDIAAVRAL NLFQGSVEDT TGSQSLAALL NKCKTPQGQR LVNQWIKQPL ENSBTAP00000003556/1-934 KLDIAAVRAL NLFQGSVEDT SGSQSLAALL NKCKTPQGQR LVNQWIKQPL BACU013887/1-934 KLDIAAVRAL NLFQGSVEDT TGSQSLAALL NKCKTPQGQR LVNQWIKQPL ENSTTRP00000004001/1-931 KLDIAAVRAL NLFQGSVEDT TGSQSLAALL NKCKTPQGQR LVNQWIKQPL 351 400 bmy_17594T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000233146/1-934 MDKNRIEERL NLVEAFVEDA ELRQTLQEDL LRRFPDLNRL AKKFQRQAAN ENSBTAP00000003556/1-934 MDKNRIEERL NLVEAFVEDA ELRQNLQEDL LRRFPDLNRL AKKFQRQAAN BACU013887/1-934 MDKNRIEERL NLVEAFVEDA ELRQSLQEDL LRRFPDLNRL AKKFQRQAAN ENSTTRP00000004001/1-931 MDKNRIEERL NLVEAFVEDA ELRQSLQEDL LRRFPDLNRL AKKFQRQAAN 401 450 bmy_17594T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000233146/1-934 LQDCYRLYQG INQLPNVIQA LEKHEGKHQK LLLAVFVTPL TDLRSDFSKF ENSBTAP00000003556/1-934 LQDCYRLYQG INQLPNVIQA LEKYEGKHQA LFLAVFVTPL IDLRSDFSKF BACU013887/1-934 LQDCYRLYQG INQLPNVIQA LEKYEGKHQA LLLAVFVTPL IDLRSDFSKF ENSTTRP00000004001/1-931 LQDCYRLYQG INQLPNVIQA LEKYEGKHQA LLLAVFVTPL IDLRSDFSKF 451 500 bmy_17594T0/1-507 ---------V KKVENHEFLV KPSFDPNLSE LREIMDDLEK KMQSTLIS-- ENSP00000233146/1-934 QEMIETTLDM DQVENHEFLV KPSFDPNLSE LREIMNDLEK KMQSTLISAA ENSBTAP00000003556/1-934 QEMIETTLDM DQVENHEFLV KPSFDPNLSE LREIMDDLEK KMQSTLVSAA BACU013887/1-934 QEMIETTLDM DQVENHEFLV KPSFDPNLSE LREIMDDLEK KMQSTLISAA ENSTTRP00000004001/1-931 QEMIETTLDM DQVENHEFLV KPSFDPNLSE LREIMDDLEK KMQSTLVSAA 501 550 bmy_17594T0/1-507 ----LDPGKQ IKLDSSTQFG YYFRVTCKEE KVLRNNKNFS TVDIQKNGVK ENSP00000233146/1-934 RDLGLDPGKQ IKLDSSAQFG YYFRVTCKEE KVLRNNKNFS TVDIQKNGVK ENSBTAP00000003556/1-934 RDLGLDPGKQ IKLDSSTQFG YYFRVTCKEE KVLRNNKNFS TVDIQKNGVK BACU013887/1-934 RDLGLDPGKQ IKLDSSTQFG YYFRVTCKEE KVLRNNKNFS TVDIQKNGVK ENSTTRP00000004001/1-931 RELGLDPGKQ IKLDSNTQFG YYFRVTCKEE KVLRNNKNFS TVDIQKNGVK 551 600 bmy_17594T0/1-507 FTNSKLTSLN EEYTKNKTEY EDAQDAIVKE IVNISSGYVE PMQTLNDVLA ENSP00000233146/1-934 FTNSKLTSLN EEYTKNKTEY EEAQDAIVKE IVNISSGYVE PMQTLNDVLA ENSBTAP00000003556/1-934 FTNSKLTSLN EEYTKNKTEY EEAQNAIVKE IVNISSGYVE PMQTLNDVLA BACU013887/1-934 FTNSKLTSLN EEYTKNKTEY EDAQDAIVKE IVNISSGYVE PMQTLNDVLA ENSTTRP00000004001/1-931 FTNSKLTSLN EEYTKNKTEY EEAQDAIVKE IVNISSGYVE PM-TLNDVLA 601 650 bmy_17594T0/1-507 QLDAVVSFAH VSNGAPVPYV RPVILEKGQG RIILKASRHA CVEVQDEVAF ENSP00000233146/1-934 QLDAVVSFAH VSNGAPVPYV RPAILEKGQG RIILKASRHA CVEVQDEIAF ENSBTAP00000003556/1-934 QLDAVVSFAH VSDAAPVPYV RPVILEKGRG RITLKASRHA CVEVQDEVAF BACU013887/1-934 QLDAVVSFAH VSNGAPVPYV RPVILEKGQG RIILKASRHA CVEVQDEVAF ENSTTRP00000004001/1-931 QLDAGVS-AH VS-GAPVSYV RPVILEKGQG RIILKASRHA CVEVQDEVAF 651 700 bmy_17594T0/1-507 IPNDVHFEKD KQMFHIITGP NMGGKSTYIR QTGVVVLMAQ IGCFVPCESA ENSP00000233146/1-934 IPNDVYFEKD KQMFHIITGP NMGGKSTYIR QTGVIVLMAQ IGCFVPCESA ENSBTAP00000003556/1-934 IPNDVHFEKD KQMFHIITGP NMGGKSTYIR QTGVVVLMAQ IGCFVPCEWA BACU013887/1-934 IPNDVHFEKD KQMFHIITGP NMGGKSTYIR QTGVVVLMAQ IGCFVPCESA ENSTTRP00000004001/1-931 IPNDVHFEKD KQVFHIITGP NMGGKSTYIR QTGVVVLMAQ IGCFVPCESA 701 750 bmy_17594T0/1-507 EVSMVDCILA RVGAGDSQLK GVSTFMAEML ETASILRSAT KDSLIIIDEL ENSP00000233146/1-934 EVSIVDCILA RVGAGDSQLK GVSTFMAEML ETASILRSAT KDSLIIIDEL ENSBTAP00000003556/1-934 EVSIVDCILA RVGAGDSQLK GVSTFMAEML ETASILRSAT KDSLIIIDEL BACU013887/1-934 EVSMVDCILA RVGAGDSQLK GVSTFMAEML ETASILRSAT KDSLIIIDEL ENSTTRP00000004001/1-931 EVSIVDCILA RVGAGDSQLK GVSTFMAEML ETASILRSAT KDSLIIIDEL 751 800 bmy_17594T0/1-507 GRGTSTYDGF GLAWAISEYI ATRIRAFCMF ATHFHELTAL ANQIPTVNNL ENSP00000233146/1-934 GRGTSTYDGF GLAWAISEYI ATKIGAFCMF ATHFHELTAL ANQIPTVNNL ENSBTAP00000003556/1-934 GRGTSTYDGF GLAWAISEYI ATKIGAFCMF ATHFHELTAL ANQIPTVNNL BACU013887/1-934 GRGTSTYDGF GLAWAISEYI ATRIRAFCMF ATHFHELTAL ANQIPTVNNL ENSTTRP00000004001/1-931 GRGTSTYDGF GLAWAISEYI ATRIRAFCMF ATHFHELTAL ANQIPTVNNL 801 850 bmy_17594T0/1-507 HVTALTTEET LTMLYQVKKG VCDQSFGIHV AELANFPRHV IECAKQKALE ENSP00000233146/1-934 HVTALTTEET LTMLYQVKKG VCDQSFGIHV AELANFPKHV IECAKQKALE ENSBTAP00000003556/1-934 HVTALTTEET LTMLYQVKKG VCDQSFGIHV AELANFPRHV IECAKQKALE BACU013887/1-934 HVTALTTEET LTMLYQVKKG VCDQSFGIHV AELANFPRHV IECAKQKALE ENSTTRP00000004001/1-931 HVTALTTEET LTMLYQVKKG VCDQSFGIHV AELANFPRHV IECAKQKALE 851 900 bmy_17594T0/1-507 LEEFQNIGKP QEHDEMEPAA KRCYLEREQG EKIIEEFLSK VKQVPFTEMS ENSP00000233146/1-934 LEEFQYIGES QGYDIMEPAA KKCYLEREQG EKIIQEFLSK VKQMPFTEMS ENSBTAP00000003556/1-934 LEEFQNIGKP QECDEMEPAA KRCYLEREQG EKIIQEFLSK VKQVPFTEMS BACU013887/1-934 LEEFQNIGKP QEYDEMEPAA KRCYLEREQG EKIIEEFLSK VKQVPFTEMS ENSTTRP00000004001/1-931 LEEFQNIGKP QEPDEMEPAA KRCYLEREQG EKIIQEFLSK VKQVPFTEMS 901 950 bmy_17594T0/1-507 EENIVMKLKQ LKAEVIAKNN RFVNEIISRI KTFTHIPEWY GRNE ENSP00000233146/1-934 EENITIKLKQ LKAEVIAKNN SFVNEIISRI KVTT------ ---- ENSBTAP00000003556/1-934 EESITRKLKQ LKAEVIAKNN SFVNEIISRI KVTA------ ---- BACU013887/1-934 EENIVMKLKQ LKAEVIAKNN RFVNEIISRI KVTT------ ---- ENSTTRP00000004001/1-931 EENIIMKLKQ LKAEVIAKNN CFVNEIISRI KVTT------ ----