KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:21:25 2014 Check: 00 .. Name: ENSP00000356065/1-176 Len: 281 Check: 9178 Weight: 1.00 Name: bmy_02363T0/1-277 Len: 281 Check: 7625 Weight: 1.00 Name: ENSBTAP00000003574/1-176 Len: 281 Check: 8935 Weight: 1.00 Name: ENSTTRP00000011484/1-149 Len: 281 Check: 8200 Weight: 1.00 // 1 50 ENSP00000356065/1-176 ---------- ---------- ---------- ---------- ---------- bmy_02363T0/1-277 MVGRAKAKEK QQERVHSVWV WGENWLGELD LEEGEKAPPG MLFQFLSQVN ENSBTAP00000003574/1-176 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011484/1-149 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000356065/1-176 ---------- ---------- ---------- ------MKAS SLAFSLLSAA bmy_02363T0/1-277 MNVKYTEPID WNAGKKISKR SCGLQNLAPE SPVVSRMKGS GLPLCLLSAV ENSBTAP00000003574/1-176 ---------- ---------- ---------- ------MRGS GLPLCLLSAV ENSTTRP00000011484/1-149 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000356065/1-176 FYLLWTPSTG LKTLNLGSCV IATNLQEIRN GFSEIRGSVQ AKDGNIDIRI bmy_02363T0/1-277 FYLFWTPSAR LKTLHLGSCV ITASLQAIRS GFSEIRDR-Q PKDEIIDLRI ENSBTAP00000003574/1-176 FYLFWTPSAG LKTLHLGSCV ITTNLQGIRS GFSEIRDSVQ AKDEIIDVRI ENSTTRP00000011484/1-149 ---------- -KTLPLGSCV ITTSLQAIRS GFSEIQDRVQ PKDEIIDLRI 151 200 ENSP00000356065/1-176 LRRTESLQDT KPANRCCLLR HLLRLYLDRV FKNYQTPDHY TLRKISSLAN bmy_02363T0/1-277 LRKTQPLQDR KPAGQCCLLR HILRLYLDKV FKNYQTPDHR ILQKISSLTN ENSBTAP00000003574/1-176 LRKTQSLQGT KPADQCCLLH HILRLYLDRV FKNYQPPDHH IFRKVSRLAN ENSTTRP00000011484/1-149 LRKTQPLQDT KPAGQCCLLR HILRLYLDRV FKN-QTPDHR ILQKISGLAN 201 250 ENSP00000356065/1-176 SFLTIKKDLR LCHAHMTCHC GEEAMKKYSQ ILSHFEK--- ---LEPQAAV bmy_02363T0/1-277 SFLTIKKDLW LCHAHVTCPC GEEAMEKYGQ LMGHFEEVYA ILALDPSPPP ENSBTAP00000003574/1-176 SLLTIKKDLQ LCHAHMSCPC GEEAKEKYSQ ILSHFEE--- ---LPPQAVV ENSTTRP00000011484/1-149 SFLTIKKDLC LCHAHMTCPS GEEAMEKYSQ LMSHYEE--- ---LQPQAAV 251 300 ENSP00000356065/1-176 VKALGELDIL LQWMEETE-- ---------- - bmy_02363T0/1-277 SHFSG---LC LTYHSTNNGE FSSGGSSQFG D ENSBTAP00000003574/1-176 VKALGELDIL LQWMEEAD-- ---------- - ENSTTRP00000011484/1-149 VKALGELDIL LSWMEMD--- ---------- -