KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:21:26 2014 Check: 00 .. Name: ENSP00000290472/1-818 Len: 823 Check: 1047 Weight: 1.00 Name: ENSBTAP00000003576/1-816 Len: 823 Check: 5952 Weight: 1.00 Name: bmy_15849T0/1-440 Len: 823 Check: 4281 Weight: 1.00 Name: ENSTTRP00000002396/1-817 Len: 823 Check: 7592 Weight: 1.00 // 1 50 ENSP00000290472/1-818 MESLSPGGPP GHPYQGEAST CWQLTVRVLE ARNLRWADLL SEADPYVILQ ENSBTAP00000003576/1-816 MERLTPRGPP GHPHQREAST CWRLTVKVLE ARGLGWADLL SKADPYVVLQ bmy_15849T0/1-440 ---------- -----GETSA CWQLTVRVLE ARGLGWADLL NEADPYVILQ ENSTTRP00000002396/1-817 MERMTARGPP GHPHQGETSA CWQLTVRVLE ARGLGWADLL SEADPYVILQ 51 100 ENSP00000290472/1-818 LSTAPGMKFK TKTLTDTSHP VWNEAFRFLI QSQVKNVLEL SIYDEDSVTE ENSBTAP00000003576/1-816 MPTAPGTKFK TKTVTNSSHP VWNETFTFLI QGQVKNVLEL TLYDEDTVTQ bmy_15849T0/1-440 LPTAPGTEFK TKTVTNSSHP VWNETFTFLI QSQVKNVLEL SIYDEDAIKK ENSTTRP00000002396/1-817 LPTAPGTKFK TKTVTNSSHP VWNESFTFLI QSQVKNVLEL SIYDKDDFKT 101 150 ENSP00000290472/1-818 DDICFKVLYD ISEVLPGKLL RKTFSQSPQG EEELDVEFLM EETSDRPENL ENSBTAP00000003576/1-816 DDAWFKVLYD VSEVLPGRLL RKTFSLRTQG PEELDVEFLI EKMSDRPENL bmy_15849T0/1-440 DDACFKVLCD VSEVLPGRWL RKTFSQHPQG PEELDVEFLX EKTSGCPENL ENSTTRP00000002396/1-817 DDACFKVLCD VSEVLPGRLL RKTFSLHPQG PEELDVEFLM EKTSGCPENL 151 200 ENSP00000290472/1-818 ITNKVIVARE LSCLDVHLDS TGSTAVVADQ DKL--ELELV LKGSYEDTQT ENSBTAP00000003576/1-816 ITNNVLVARE LSRLDVHVV- --SMAVAADQ D----ELELV LKGSYEDTQT bmy_15849T0/1-440 ITNNVLVARE LSCLDVHLDS TGSTAEAADQ DELEMELELV LKGSYEDTQT ENSTTRP00000002396/1-817 ITNNVLVARE LSCLDVHLDS TGSTAEAADQ DEL--ELELV LKGSYEDTQT 201 250 ENSP00000290472/1-818 SFLGTASAFR FHYMAALETE LSGRLRSSRS NGWNGDNSAG YLTVPLRPLT ENSBTAP00000003576/1-816 STLGTASAFC FHYMAAQEAE LSGCLRSSIS SGWNSGHLAG HLTVPLRSLA bmy_15849T0/1-440 SALGTASAFR FHYMAAQEAE LSGCLRTSKS NGWNSGNSVG HLTMPLRSLA ENSTTRP00000002396/1-817 SALGTASAFR FHYMAAQEAE LSGCLRTSKS NGWNSGNSDA YLTVPLRSLA 251 300 ENSP00000290472/1-818 IGKEVTMDVP APNAPGVRLQ LKAEGCPEEL AVHLGFNLCA EEQAFLSRRK ENSBTAP00000003576/1-816 MEKEVTIDVP ATNAPGVKLQ LKAESCPEEL AVHLGFDLSV EERAFLSRRK bmy_15849T0/1-440 VGKEVTVDIP ATNAPGVKLQ LKAESCPEEL AVHLGFDLCA EEKAFLSRRK ENSTTRP00000002396/1-817 MGEEVTVDVP ATNAPGVKLQ LKAESCPKEL AVHLGFDLCA EEKAFLRSRK 301 350 ENSP00000290472/1-818 QVVAKALKQA LQLDRDLQED EVPVVGIMAT GGGARAMTSL YGHLLALQKL ENSBTAP00000003576/1-816 QVVAKALKQV LQLDGDLQED EVPVIGIMAT GGGARAMTSL YGQLLALQKL bmy_15849T0/1-440 QVVAKALKQA LQLDRDLQED EVPVVGIMAT GGGARAMTSL YGHLLALQKL ENSTTRP00000002396/1-817 QVVAKALKQA LQLDRDLQED EVPVVGIMAT GGGARAMTSL YGHLLALQKL 351 400 ENSP00000290472/1-818 GLLDCVTYFS GISGSTWTMA HLYGDPEWSQ RDLEGPIRYA REHLAKSKLE ENSBTAP00000003576/1-816 GLLDCVTYFS GISGSTWTMA HLYGDPEWSQ KDLKGPISHV REHLAKSKLE bmy_15849T0/1-440 GLLDCVTYFS GISGSTWTMA HLYGDPEWSQ RDLKGPIRHA REHLAKSKLE ENSTTRP00000002396/1-817 DLLDCVTYFS GISGSTWTMA YLYGDPEWSQ RDLKGPIGHA REHLAKSKLE 401 450 ENSP00000290472/1-818 VFSPERLASY RRELELRAEQ GHPTTFVDLW ALVLESMLHG QVMDQKLSGQ ENSBTAP00000003576/1-816 VFSPKCLASY HRELQQRAEQ GRTTTFVDLW GLVLELMLHG QVVDQKLSGQ bmy_15849T0/1-440 AFSPERLASY HRELEQRAEQ GHPRTFVDLW GLVLEFTLHG QV-------- ENSTTRP00000002396/1-817 AFSPERLASY YRELEQRAEQ GHPTTFVDLW GLVLEFALHG QVMDQKLSGQ 451 500 ENSP00000290472/1-818 RAALERGQNP LPLYLSLNVK ENNLETLDFK EWVEFSPYEV GFLKYGAFVP ENSBTAP00000003576/1-816 RAALERGQNP LPLYLSLSVK ENSLQTLDFK EWVEFSPYEV GFLKYGAFVP bmy_15849T0/1-440 --------GP L--------- ---------- ---------- ---------- ENSTTRP00000002396/1-817 RAALERGQNP LPLYLSLNVK ENNLQTPDFK EWVEFSPYEV GFLKYGAFIP 501 550 ENSP00000290472/1-818 PELFGSEFFM GRLMRRIPEP RICFLEAIWS NIFSLNLLDA WYDLTSSGES ENSBTAP00000003576/1-816 PELFGSEFFM GRLMKRLPES RICFLEGIWS NIFSLNLLDA WYDLTSSDDT bmy_15849T0/1-440 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002396/1-817 SELFGSDFFM GRLMRRIPES RICFLEGIWS NIFSLNLLDA WYNLTSSSDA 551 600 ENSP00000290472/1-818 WKQHIKDKTR SLEKEP---L TTSGTSSRLE ASWLQPGTAL AQAFKGFLTG ENSBTAP00000003576/1-816 WKQHIRDKIR DLGKEPGVSP ASSGTSSWPE TLWMQPGTAL AQMFKGLLTS bmy_15849T0/1-440 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002396/1-817 WKQHIKDEIR SLEESP---- PSSGTSSGPE ALWLQPGTAL AQMLKGFLTS 601 650 ENSP00000290472/1-818 RPLHQRSPNF LQGLQLHQDY CSHKDFSTWA DYQLDSMPSQ LTPKEPRLCL ENSBTAP00000003576/1-816 RPLYQHSSNF LQGLQMHKDY CAQKDFTTWA DCRPDSSPNQ LTPQEPQLCL bmy_15849T0/1-440 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002396/1-817 RPLYQHSSNF LQGLQLHQDY RAQKDFSTWA DSQVDSSAGQ LTPQEPQLCL 651 700 ENSP00000290472/1-818 VDAAYFINTS SPSMFRPGRR LDLILSFDYS LSAPFEALQQ TELYCRARGL ENSBTAP00000003576/1-816 VDAGYFINTS CPVMFRPGRR LDLIISFDYS LSSPFEVLQQ TELDFRARGL bmy_15849T0/1-440 ---------- ---------- ---------- ---------- -----RMRG- ENSTTRP00000002396/1-817 VDAGYFLNTS CPSMFRPGRR LDLILSFDYS LSSPFEVLQQ TELDCRARGL 701 750 ENSP00000290472/1-818 PFPRVEPSPQ DQHQPRECHL FSDPACPEAP ILLHFPLVNA SFKDHSAPGV ENSBTAP00000003576/1-816 PFPRVEPSPK DRRQPQECHL FSDPACPDAP VVLHFPLVNA SFKDHSAPGV bmy_15849T0/1-440 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002396/1-817 PFPRVEPSPQ DRRQPWECHL FSDPTCPDAP VVLHFPLVNA SFRDHSAPGV 751 800 ENSP00000290472/1-818 QRSPAELQGG QVDLTGATCP YTLSNMTYKE EDFERLLRLS DYNVQTSQGA ENSBTAP00000003576/1-816 QRGPAELSAG QIDLTGVTSP YSTFNMTYKE EDFDRLVQLS DYNVRSSQDT bmy_15849T0/1-440 ---------- ---------- ---------- ---------- --------GA ENSTTRP00000002396/1-817 QRSPAELPAG QVDLTGDNSP YSMFNMTYKE EDFDRLLQLS DYNVRNSQGT 801 850 ENSP00000290472/1-818 ILQALRTALK HRTLEARPPR AQT ENSBTAP00000003576/1-816 ILQALRTVLK HRAPEARPPR VQT bmy_15849T0/1-440 CVHG------ ---------- --- ENSTTRP00000002396/1-817 ILQALRTSLR HRAPGARPPG PQT