KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:29 2014 Check: 00 .. Name: bmy_11693T0/1-217 Len: 340 Check: 7702 Weight: 1.00 Name: ENSP00000232564/1-340 Len: 340 Check: 34 Weight: 1.00 Name: BACU016608/1-340 Len: 340 Check: 34 Weight: 1.00 Name: ENSTTRP00000001481/1-340 Len: 340 Check: 34 Weight: 1.00 Name: ENSBTAP00000003589/1-340 Len: 340 Check: 9882 Weight: 1.00 // 1 50 bmy_11693T0/1-217 MSELEQLRQE AEQLRNQIQD ARKACNDATL VQITSNMDSV GRIQMRTRRT ENSP00000232564/1-340 MSELEQLRQE AEQLRNQIQD ARKACNDATL VQITSNMDSV GRIQMRTRRT BACU016608/1-340 MSELEQLRQE AEQLRNQIQD ARKACNDATL VQITSNMDSV GRIQMRTRRT ENSTTRP00000001481/1-340 MSELEQLRQE AEQLRNQIQD ARKACNDATL VQITSNMDSV GRIQMRTRRT ENSBTAP00000003589/1-340 MSELEQLRQE AEQLRNQIQD ARKACNDATL VQITSNMDSV GRIQMRTRRT 51 100 bmy_11693T0/1-217 LRGHLAKIYA MHWGYDSRLL VSASQDGKLI IWDSYTTNKM HAIPLRSSWV ENSP00000232564/1-340 LRGHLAKIYA MHWGYDSRLL VSASQDGKLI IWDSYTTNKM HAIPLRSSWV BACU016608/1-340 LRGHLAKIYA MHWGYDSRLL VSASQDGKLI IWDSYTTNKM HAIPLRSSWV ENSTTRP00000001481/1-340 LRGHLAKIYA MHWGYDSRLL VSASQDGKLI IWDSYTTNKM HAIPLRSSWV ENSBTAP00000003589/1-340 LRGHLAKIYA MHWGYDSRLL VSASQDGKLI IWDSYTTNKM HAIPLRSSWV 101 150 bmy_11693T0/1-217 MTCAYAPSGN YVACGGLDNI CSIYNLKTRE GNVRVSRD-- ---------- ENSP00000232564/1-340 MTCAYAPSGN YVACGGLDNI CSIYNLKTRE GNVRVSRELP GHTGYLSCCR BACU016608/1-340 MTCAYAPSGN YVACGGLDNI CSIYNLKTRE GNVRVSRELP GHTGYLSCCR ENSTTRP00000001481/1-340 MTCAYAPSGN YVACGGLDNI CSIYNLKTRE GNVRVSRELP GHTGYLSCCR ENSBTAP00000003589/1-340 MTCAYAPSGN YVACGGLDNI CSIYNLKTRE GNVRVSRELP GHTGYLSCCR 151 200 bmy_11693T0/1-217 ---------- ------ALWD IETAQQTTTF TGHSGDVMSL SLSPDMRTFV ENSP00000232564/1-340 FLDDSQIVTS SGDTTCALWD IETAQQTTTF TGHSGDVMSL SLSPDMRTFV BACU016608/1-340 FLDDSQIVTS SGDTTCALWD IETAQQTTTF TGHSGDVMSL SLSPDMRTFV ENSTTRP00000001481/1-340 FLDDSQIVTS SGDTTCALWD IETAQQTTTF TGHSGDVMSL SLSPDMRTFV ENSBTAP00000003589/1-340 FLDDSQIVTS SGDTTCALWD IETAQQTTAF TGHSGDVMSL SLSPDMRTFV 201 250 bmy_11693T0/1-217 SGACDASSKL WDIRDGMCRQ SFTGHVSDIN AVSVF----- ---------- ENSP00000232564/1-340 SGACDASSKL WDIRDGMCRQ SFTGHVSDIN AVSFFPNGYA FATGSDDATC BACU016608/1-340 SGACDASSKL WDIRDGMCRQ SFTGHVSDIN AVSFFPNGYA FATGSDDATC ENSTTRP00000001481/1-340 SGACDASSKL WDIRDGMCRQ SFTGHVSDIN AVSFFPNGYA FATGSDDATC ENSBTAP00000003589/1-340 SGACDASSKL WDIRDGMCRQ SFTGHVSDIN AVSFFPNGYA FATGSDDATC 251 300 bmy_11693T0/1-217 ---------- -LL-----VM TTVSAV---- ---------- ---------- ENSP00000232564/1-340 RLFDLRADQE LLLYSHDNII CGITSVAFSK SGRLLLAGYD DFNCNVWDTL BACU016608/1-340 RLFDLRADQE LLLYSHDNII CGITSVAFSK SGRLLLAGYD DFNCNVWDTL ENSTTRP00000001481/1-340 RLFDLRADQE LLLYSHDNII CGITSVAFSK SGRLLLAGYD DFNCNVWDTL ENSBTAP00000003589/1-340 RLFDLRADQE LLLYSHDNII CGITSVAFSK SGRLLLAGYD DFNCNVWDTL 301 350 bmy_11693T0/1-217 ---------- ---------- ---------- ---------- ENSP00000232564/1-340 KGDRAGVLAG HDNRVSCLGV TDDGMAVATG SWDSFLRIWN BACU016608/1-340 KGDRAGVLAG HDNRVSCLGV TDDGMAVATG SWDSFLRIWN ENSTTRP00000001481/1-340 KGDRAGVLAG HDNRVSCLGV TDDGMAVATG SWDSFLRIWN ENSBTAP00000003589/1-340 KGDRAGVLAG HDNRVSCLGV TDDGMAVATG SWDSFLRIWN