KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:33 2014 Check: 00 .. Name: BACU003501/1-990 Len: 994 Check: 8614 Weight: 1.00 Name: ENSP00000318861/1-895 Len: 994 Check: 6314 Weight: 1.00 Name: ENSBTAP00000003602/1-896 Len: 994 Check: 8649 Weight: 1.00 Name: bmy_07787T0/1-764 Len: 994 Check: 2557 Weight: 1.00 Name: ENSTTRP00000013611/1-895 Len: 994 Check: 5199 Weight: 1.00 // 1 50 BACU003501/1-990 MAAEHPEPPK GELQLPPPPP PGHYGAWAAQ ELQAKLAEIG APIQ-GSREE ENSP00000318861/1-895 MATEHPEPPK AELQLPPPPP PGHYGAWAAQ ELQAKLAEIG APIQ-GNREE ENSBTAP00000003602/1-896 MAAEHPEPPK GELQLPPPPP PGHYGAWAAQ ELQAKLAEIG APIQAGSREE bmy_07787T0/1-764 MAAEHPEPPK GELQLPPPPP PGHYGAWAAQ ELQARLAEIG APIQ------ ENSTTRP00000013611/1-895 MAAEHPEPPK GELQLPPPPP PGHYGAWAAQ ELQAKLAEIG APIQ-GTREE 51 100 BACU003501/1-990 LVERLQTYTR QTGIVLNRPV LRGEDGDKAA PPPMSAQLSG IPMPPPPMGL ENSP00000318861/1-895 LVERLQSYTR QTGIVLNRPV LRGEDGDKAA PPPMSAQLPG IPMPPPPLGL ENSBTAP00000003602/1-896 LVERLQTYTR QTGIVLNRPV LRGEDGDKAA PPPMSAQLSG IPMPPPPMGL bmy_07787T0/1-764 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013611/1-895 LVERLQTYTR QTGIVLNRPV LRGEDGDKAA PPPMSAQLSG IPMPPPPMGL 101 150 BACU003501/1-990 PSLQXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000318861/1-895 PPLQPPPPPP PPPPGLGLGF PMA---HPPN LGPPPPL--- ---------- ENSBTAP00000003602/1-896 PPLQPPPPPP PPPPGLGLGF PMAVGPRPPN LGPPPPL--- ---------- bmy_07787T0/1-764 ---------- ---------- ---VGPRPPN LGPPPPL--- ---------- ENSTTRP00000013611/1-895 PPLQPPPPPP PPPPGLGLGF PMAVGPRPPN LGPPPPL--- ---------- 151 200 BACU003501/1-990 XXXXXXXXXX XXXXAGRAGG SLSLGPIRVP KGERSLRESR ILGPRLLGRS ENSP00000318861/1-895 ---------- ------RVG- ----EPVALS EEER-LKLAQ QQAALLMQQE ENSBTAP00000003602/1-896 ---------- ------RVG- ----EPVALS EEER-LKLAQ QQAALLMQQE bmy_07787T0/1-764 ---------- ------RGG- ----EPVALS EEER-LKLAQ QQAALLMQQE ENSTTRP00000013611/1-895 ---------- ------RVG- ----DPVALS EEER-LKLAQ QQAALLMQQE 201 250 BACU003501/1-990 EPKTWALGWK RTPGSRVVAD WPVGYWCWYE LVFFFNQGDH SLKEHELLEQ ENSP00000318861/1-895 ERAK------ ---------- ---------- -----QQGDH SLKEHELLEQ ENSBTAP00000003602/1-896 ERAK------ ---------- ---------- -----QQGDH SLKEHELLEQ bmy_07787T0/1-764 ERAK------ ---------- ---------- ------QGDH SLKEHELLEQ ENSTTRP00000013611/1-895 ERAK------ ---------- ---------- -----QQGDH SLKEHELLEQ 251 300 BACU003501/1-990 QKRAAVLLEQ ERQQEIAKMG TPVPRPPQDM GQIGVRTPLG PRVAA---PV ENSP00000318861/1-895 QKRAAVLLEQ ERQQEIAKMG TPVPRPPQDM GQIGVRTPLG PRVAAPVGPV ENSBTAP00000003602/1-896 QKRAAVLLEQ ERQQEIAKMG TPVPRPPQDM GQIGVRTPLG PRVAA---PV bmy_07787T0/1-764 QKRAAVLLEQ ERQQEIAKMG TPVPRPPQDM GQIGVRTPL- --VAA---PV ENSTTRP00000013611/1-895 QKRAAVLLEQ ERQQEIAKMG TPVPRPPQDM GQIGVRTPLG PRVAA---PV 301 350 BACU003501/1-990 GPTPTVLPMG APVPRPRGPP PPPGDENREM DDPSVGPKIP QALEKILQLK ENSP00000318861/1-895 GPTPTVLPMG APVPRPRGPP PPPGDENREM DDPSVGPKIP QALEKILQLK ENSBTAP00000003602/1-896 GPTPTVLPMG APVPRPRGPP PPPGDENREM DDPSVGPKIP QALEKILQLK bmy_07787T0/1-764 GPTPTVLPMG APVPRPRGPP PPPGDENREM DDPSVGPKIP QALEKILQLK ENSTTRP00000013611/1-895 GPTPTVLPMG APVPRPRGPP PPPGDENREM DDPSVGPKIP QALEKILQLK 351 400 BACU003501/1-990 ESRQEEMNSQ QEEEEMETDT RSSLGHSASE TEEDTVSVSK KEKNRKRRNR ENSP00000318861/1-895 ESRQEEMNSQ QEEEEMETDA RSSLGQSASE TEEDTVSVSK KEKNRKRRNR ENSBTAP00000003602/1-896 ESRQEEMNSQ QEEEEMETDT RSSLGHSASE TEEDTMSVSK KEKNRKRRNR bmy_07787T0/1-764 ESRQEEMNSQ QEEEEMETDT RSSLGHSASE TEEDTVSVSK KEKNRKRRNR ENSTTRP00000013611/1-895 ESRQEEMNSQ QDEEEMETDT RSSLGHSASE TEEDTVSISK KEKNRKRRNR 401 450 BACU003501/1-990 KKKKKPQRVR GASSESSGDR DKESSRSRGS DSPAADVEIE YVTEEPEIYE ENSP00000318861/1-895 KKKKKPQRVR GVSSESSGDR EKDSTRSRGS DSPAADVEIE YVTEEPEIYE ENSBTAP00000003602/1-896 KKKKKPQRAR AASSESSGDR DKESGRSRGS ESPAADVEIE YVTEEPEIYE bmy_07787T0/1-764 KKKKKPQRVR GASSESSGDR DKESSRSRGS DSPAADVEIE YVTEEPEIYE ENSTTRP00000013611/1-895 KKKKKPQRVR GASSESSGDR DKESSRSRGS DSPAADVEIE YVTEEPEIYE 451 500 BACU003501/1-990 PNFIFFKRIF EAFKLTDDVK KEKEKEPEKL DKLENSAAPK KKGFEEEHKD ENSP00000318861/1-895 PNFIFFKRIF EAFKLTDDVK KEKEKEPEKL DKLENSAAPK KKGFEEEHKD ENSBTAP00000003602/1-896 PNFIFFKRIF EAFKLTDDVK KEKEKEPEKL DKMENSAVPK KKGFEEEHKD bmy_07787T0/1-764 PNFIFFKRIF EAFKLTDDVK KEKEKEPEKL DKLENSAAPK KKGFEEEHKD ENSTTRP00000013611/1-895 PNFIFFKRIF EAFKLTDDVK KEKEKEPEKL DKLENSAAPK KKGFEEEHKD 501 550 BACU003501/1-990 SDDDSSDDEQ EKKPEAPKLS KKKLRRMNRF TVAELKQLVA RPDVVEMHDV ENSP00000318861/1-895 SDDDSSDDEQ EKKPEAPKLS KKKLRRMNRF TVAELKQLVA RPDVVEMHDV ENSBTAP00000003602/1-896 SDDDSSDDEQ EKKPEAPKLS KKKLRRMNRF TVAELKQLVA RPDVVEMHDV bmy_07787T0/1-764 SDDDSSDDE- ---------- ---------- ------QLVA RPDVVEMHDV ENSTTRP00000013611/1-895 SDDDSSDDEQ EKKPEAPKLS KKKLRRMNRF TVAELKQLVA RPDVVEMHDV 551 600 BACU003501/1-990 TAQDPKLLVH LKATRNSVPV PRHWCFKRKY LQGKRGIEKP PFELPDFIKR ENSP00000318861/1-895 TAQDPKLLVH LKATRNSVPV PRHWCFKRKY LQGKRGIEKP PFELPDFIKR ENSBTAP00000003602/1-896 TAQDPKLLVH LKATRNSVPV PRHWCFKRKY LQGKRGIEKP PFELPDFIKR bmy_07787T0/1-764 TAQDPKLLVH LKATRNSVPV PRHWCFKRKY LQGKRGIEKP PFELPDFIKR ENSTTRP00000013611/1-895 TAQDPKLLVH LKATRNSVPV PRHWCFKRKY LQGKRGIEKP PFELPDFIKR 601 650 BACU003501/1-990 TGIQEMREAL QEKEEQKTMK SKMREKVRPK MGKIDIDYQK LHDAFFKWQT ENSP00000318861/1-895 TGIQEMREAL QEKEEQKTMK SKMREKVRPK MGKIDIDYQK LHDAFFKWQT ENSBTAP00000003602/1-896 TGIQEMREAL QEKEEQKTMK SKMREKVRPK MGKIDIDYQK LHDAFFKWQT bmy_07787T0/1-764 TGIQEMREAL QEKEEQKTMK SKMREKVRPK MGKIDIDYQK LHDAFFKWQT ENSTTRP00000013611/1-895 TGIQEMREAL QEKEEQKTMK SKMREKVRPK MGKIDIDYQK LHDAFFKWQT 651 700 BACU003501/1-990 KPKLTIHGDL YYEVRESVGR EGWAFGHGCV TLGHKGFGSW KRGKEFETRL ENSP00000318861/1-895 KPKLTIHGDL YYE------- ---------- ---------- --GKEFETRL ENSBTAP00000003602/1-896 KPKLTIHGDL YYE------- ---------- ---------- --GKEFETRL bmy_07787T0/1-764 KPKLTIHGDL YYE------- ---------- ---------- --GKEFETRL ENSTTRP00000013611/1-895 KPKLTIHGDL YYE------- ---------- ---------- --GKEFETRL 701 750 BACU003501/1-990 KEKKPGDLSD ELRISLGMPV GPNAHKVPPP WLIAMQRYGP PPSYPNLKIP ENSP00000318861/1-895 KEKKPGDLSD ELRISLGMPV GPNAHKVPPP WLIAMQRYGP PPSYPNLKIP ENSBTAP00000003602/1-896 KEKKPGDLSD ELRISLGMPV GPNAHKVPPP WLIAMQRYGP PPSYPNLKIP bmy_07787T0/1-764 KEKKPGDLSD ELRISLGMPV GPNAHKVPPP WLIAMQRYGP PPSYPNLKIP ENSTTRP00000013611/1-895 KEKKPGDLSD ELRISLGMPV GPNAHKVPPP WLIAMQRYGP PPSYPNLKIP 751 800 BACU003501/1-990 GLNSPIPESC SFGYHAGGWG KPPVDETGKP LYGDVFGTNA AEFQTKTEEE ENSP00000318861/1-895 GLNSPIPESC SFGYHAGGWG KPPVDETGKP LYGDVFGTNA AEFQTKTEEE ENSBTAP00000003602/1-896 GLNSPIPESC SFGYHAGGWG KPPVDETGKP LYGDVFGTNA AEFQTKTEEE bmy_07787T0/1-764 GLNSPIPESC SFGYHAGGWG KPPVDETGKP LYGDVFGTNA AEFQ------ ENSTTRP00000013611/1-895 GLNSPIPESC SFGYHAGGWG KPPVDETGKP LYGDVFGTNA AEFQTKTEEE 801 850 BACU003501/1-990 EIDRTPWGEL EPSDEESSEE EEEEESDEDK PDETGFITPA DSGLITPGGF ENSP00000318861/1-895 EIDRTPWGEL EPSDEESSEE EEEEESDEDK PDETGFITPA DSGLITPGGF ENSBTAP00000003602/1-896 EIDRTPWGEL EPSDEESSEE EEEEESDEDK PDETGFITPA DSGLITPGGF bmy_07787T0/1-764 ---------- ------SSEE EEEEESDEDK PDETGFITPA DSGLITPGGF ENSTTRP00000013611/1-895 EIDRTPWGEL EPSDEESSEE EEEEESDEDK PDETGFITPA DSGLITPGGF 851 900 BACU003501/1-990 SSVPAGMETP ELIELRKKKI EEAMDGSETP QLFTVLPEKR TATVGGAMMG ENSP00000318861/1-895 SSVPAGMETP ELIELRKKKI EEAMDGSETP QLFTVLPEKR TATVGGAMMG ENSBTAP00000003602/1-896 SSVPAGMETP ELIELRKKKI EEAMDGSETP QLFTVLPEKR TATVGGAMMG bmy_07787T0/1-764 SSVPAGMETP ELIELRKKKI EEAMDGSETP QLFTVLPEKR TATVGGAMMG ENSTTRP00000013611/1-895 SSVPAGMETP ELIELRKKKI EEAMDGSETP QLFTVLPEKR TATVGGAMMG 901 950 BACU003501/1-990 STHIYDMSTV MSRKGPAPEL QGVEVALAPE ELELDPMAMT QKYEEHVREQ ENSP00000318861/1-895 STHIYDMSTV MSRKGPAPEL QGVEVALAPE ELELDPMAMT QKYEEHVREQ ENSBTAP00000003602/1-896 STHIYDMSTV MSRKGPAPEL QGVEVALAPE ELELDPMAMT QKYEEHVREQ bmy_07787T0/1-764 STHIYDMSTV MSRKGPAPEL QGVEVALAPE ELELDPMAMT QKYEEHVREQ ENSTTRP00000013611/1-895 STHIYDMSTV MSRKGPAPEL QGVEVALAPE ELELDPMAMT QKYEEHVREQ 951 1000 BACU003501/1-990 QAQVEKEDFS DMVAEHAAKQ KQKKRKAQPQ DSRGGSKKYK EFKF ENSP00000318861/1-895 QAQVEKEDFS DMVAEHAAKQ KQKKRKAQPQ DSRGGSKKYK EFKF ENSBTAP00000003602/1-896 QAQVEKEDFS DMVAEHAAKQ KQKKRKAQPQ DSRGGSKKYK EFKF bmy_07787T0/1-764 QAQVEKEDFS DMVAEHAAKQ KQKKRKAQPQ DSRGGSKKYK EFKF ENSTTRP00000013611/1-895 QAQVEKEDFS DMVAEHAAKQ KQKKRKAQPQ DSRGGSKKYK EFKF