KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:34 2014 Check: 00 .. Name: ENSP00000430100/1-440 Len: 440 Check: 361 Weight: 1.00 Name: ENSTTRP00000010352/1-427 Len: 440 Check: 5188 Weight: 1.00 Name: ENSBTAP00000003604/1-440 Len: 440 Check: 2142 Weight: 1.00 Name: bmy_17345T0/1-422 Len: 440 Check: 8567 Weight: 1.00 Name: BACU019774/1-440 Len: 440 Check: 9409 Weight: 1.00 // 1 50 ENSP00000430100/1-440 MNYSLHLAFV CLSLFTERMC IQGSQFNVEV GRSDKLSLPG FENLTAGYNK ENSTTRP00000010352/1-427 MRHSLHLTFL CLSLLTGRMC IQGNQFNIKA SRSDKLSLPG FENLTAGYNK ENSBTAP00000003604/1-440 MKRSLHLTFV CLSLFSARMC VQGNQFNIEV SRSNKLSLPG FENLTAGYNK bmy_17345T0/1-422 ---------- --------MC IQGNQFNIKA SRSDKLSLPG FENLTAGYNK BACU019774/1-440 MRHSLHLTFM CLSLLTGRMC IQGNQFNIKA SRSDKLSLPG FENLTAGYNK 51 100 ENSP00000430100/1-440 FLRPNFGGEP VQIALTLDIA SISSISESNM DYTATIYLRQ RWMDQRLVFE ENSTTRP00000010352/1-427 FLRPNFGGEP VQIALTLDIA SISSISESNM DYTATIYLRQ RWTDQRLVFE ENSBTAP00000003604/1-440 FLRPNFGGEP VQIALTLDVA SISSISESNM DYTATIYLRQ RWTDQRLVFE bmy_17345T0/1-422 FLRPNFGGEP VQIALTLDIA SISSISESNM DYTATIYLRQ RWTDQRLVFE BACU019774/1-440 FLRPNFGGEP VQIALTLDIA SISSISESNM DYTATIYLRQ RWTDKRLVFE 101 150 ENSP00000430100/1-440 GNKSFTLDAR LVEFLWVPDT YIVESKKSFL HEVTVGNRLI RLFSNGTVLY ENSTTRP00000010352/1-427 GDKSFTLDAR LVEFLWVPDT YIVESKKSFL HEVTVGNRLI RLFSNGTVLY ENSBTAP00000003604/1-440 GNKSFTLDAR LVEFLWVPDT YIVESKKSFL HEVTVGNRLI RLFSNGTVLY bmy_17345T0/1-422 GNKSFTLDAR LVEFLWVPDT YIVESKKSFL HEVTVGNRLV RLFSNGTVLY BACU019774/1-440 GNKSFTLDAR LVEFLWVPDT YIVESKKSFL HEVTVGNRLI RLFSNGTVLY 151 200 ENSP00000430100/1-440 ALRITTTVAC NMDLSKYPMD TQTCKLQLES WGYDGNDVEF TWLRGNDSVR ENSTTRP00000010352/1-427 ALRITTTVAC NMDLSKYPMD TQTCKLQLES WGYDGNDVEF SWLRGNDSVR ENSBTAP00000003604/1-440 ALRITTTVAC NMDLSKYPMD TQTCKLQLES WGYDGNDVEF SWLRGNDSVR bmy_17345T0/1-422 ALRITTTVAC NMDLSKYPMD TQTCKLQLES WGYDGNDVEF SWLRGNDSVR BACU019774/1-440 ALRITTTVAC NMDLSKYPMD TQTCKLQLES WGYDGNDVEF SWLRGNDSVR 201 250 ENSP00000430100/1-440 GLEHLRLAQY TIERYFTLVT RSQQETGNYT RLVLQFELRR NVLYFILETY ENSTTRP00000010352/1-427 GLENLRLAQY TVQQYFTLAT RSQQETNN-- -LVLE---QR NVLYFI--ET ENSBTAP00000003604/1-440 GLENLRLAQY TIQQYFTSVT RSQQETGNYT RLVLQFELQR NVLYFILETY bmy_17345T0/1-422 GLENLRLAQY TIQQYFTLVT RSQQETGNYT RLVLQFELQR NVLYFILETY BACU019774/1-440 GLENLRLAQY TIQQYFTLVT RSQQETGNYT RLVLQFELQR NVLYFILETY 251 300 ENSP00000430100/1-440 VPSTFLVVLS WVSFWISLDS VPARTCIGVT TVLSMTTLMI GSRTSLPNTN ENSTTRP00000010352/1-427 ISSTL--VVS WV-VWIS-DS VPARTCIGVT TVLSMTTLMI GSRTSLPNTN ENSBTAP00000003604/1-440 VPSTFLVVLS WVSFWISLDS VPARTCIGVT TVLSMTTLMI GSRTSLPNTN bmy_17345T0/1-422 VPSTFLVVLS WVSFWISLDS VPARTCIGVT TVLSMTTLMI GSRTSLPNTN BACU019774/1-440 VPSTFLVVLS WVSFWISLDS VPARTCIGVT TVLSMTTLMI GSRTSLPNTN 301 350 ENSP00000430100/1-440 CFIKAIDVYL GICFSFVFGA LLEYAVAHYS SLQQMAAKDR GTTKEVEEVS ENSTTRP00000010352/1-427 CFIKAIDVYL GICFSFVFGA LLEYAVAHYS SLQQMAAKDR GKAKEVEEVN ENSBTAP00000003604/1-440 CFIKAIDVYL GICFSFVFGA LLEYAVAHYS SLQQMAAKDR GKAKEVEEVN bmy_17345T0/1-422 CFIKAIDVYL GICFSFVFGA LLEYAVAHYS SLQQMAAKDR GNAKEVEEVN BACU019774/1-440 CFIKAIDVYL GICFSFVFGA LLEYAVAHYS SLQQMAAKDR GKAKEVEEVN 351 400 ENSP00000430100/1-440 ITNIINSSIS SFKRKISFAS IEISSDNVDY SDLTMKTSDK FKFVFREKMG ENSTTRP00000010352/1-427 ITNIINSSIS TFKRKISLAS IEISSDNVDY SDLTMKTSDK FKFIFRDKMG ENSBTAP00000003604/1-440 ITNIINSSIS SFKRKISFAS IEISGDNVDY SDLTMKTSDK VKFVFRDKLG bmy_17345T0/1-422 ITNIINSSIS SFKRKISFAS IEISSDNVDY SDLTMKTSDK FKFIFRDKMG BACU019774/1-440 ITNIINSSIS SFKRKISFAS IEISSDNVDY SDLTMKTRDK FKFIFRDKMG 401 450 ENSP00000430100/1-440 RIVDYFTIQN PSNVDHYSKL LFPLIFMLAN VFYWAYYMYF ENSTTRP00000010352/1-427 RIVDYFTIQN PSNVDRYS-L LFPFVFMLAN VFYWAYYMYF ENSBTAP00000003604/1-440 RIVDYFTIQN PSNVDRYSKL LFPLIFMLAN VFYWAYYMYF bmy_17345T0/1-422 RIVDYFTIQN PSNVDRYSKL LFPLIFMLAN VFYWAYYMYF BACU019774/1-440 RIVDYFTIQN PSNVDRYSKL LFPLIFMLAN VFYWAYYMYF