KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:34 2014 Check: 00 .. Name: ENSP00000317027/1-453 Len: 479 Check: 3655 Weight: 1.00 Name: ENSBTAP00000003605/1-454 Len: 479 Check: 8085 Weight: 1.00 Name: bmy_12864T0/1-471 Len: 479 Check: 819 Weight: 1.00 Name: BACU006187/1-454 Len: 479 Check: 8879 Weight: 1.00 Name: ENSTTRP00000016408/1-455 Len: 479 Check: 4995 Weight: 1.00 // 1 50 ENSP00000317027/1-453 MKIFKCYFKH TLQQKVFILF LTLW------ -----LLSLL ---------- ENSBTAP00000003605/1-454 MKTFKCCFKY HLQQKVFILF LTLW------ -----LLSLL ---------- bmy_12864T0/1-471 -----MSF-Y PILKGAFDLF -PVWGEVIRL SPGTEAFALL CKCDAGQQRC BACU006187/1-454 MKTFKCCFKH HLKQKVFILF LTLW------ -----LFSLL ---------- ENSTTRP00000016408/1-455 MKTFKCCFKY HLKQKVFILF LTLW------ -----LFSLL ---------- 51 100 ENSP00000317027/1-453 ---KLLNVRR -LFPQKDIYL VEYSLSTSPF VRNRYTHVKD EVRYEVNCSG ENSBTAP00000003605/1-454 ---KLLNVKR FLFPERGIYL VEYSLSTSPF VRNRYTHVKN EIGYEINCSG bmy_12864T0/1-471 CLDLLLNVKR LLFPERGIYL VEYSLSTSPF VKNRYTHVKN EIVYEINCSG BACU006187/1-454 ---KLLNVKR LLFPERGIYL VEYSLSTSPF VKNRYTHVKN EIAYEINCSG ENSTTRP00000016408/1-455 ---KLLNVKR LLFPERGIYL VEYSLSTSPF VKNRYTHVKN EIGYEINCSG 101 150 ENSP00000317027/1-453 IYEQEPLEIG KSLEIRRRDI IDLEDDDVVA MTSDCDIYQT LRGYAQKLVS ENSBTAP00000003605/1-454 VYEQEPLEIG KSLEIRRRTI IDLDDDDVVA ITSDCEIYQA LRSYDEKLVS bmy_12864T0/1-471 VYEQEPLEIG KSLEIRRRTI IDLDDDDVVA MTSDCDIYQA LRSYHEKLVS BACU006187/1-454 VYEQEPLEIG KSLEIRRRTI IDLDDDDVVA MTSDCDIYQA LRSYHEKLIS ENSTTRP00000016408/1-455 VYEQEPLEIG KSLEIRRRTI IDLDDDDVVA MTSDCDIYQA LRSYHEKLVS 151 200 ENSP00000317027/1-453 KEEKSFPIAY SLVVHKDAIM VERLIHAIYN QHNIYCIHYD RKAPDTFKVA ENSBTAP00000003605/1-454 EEEKSFPIAY SLVVHKDAIM VERLILAIYN QHNIYCIHYD QKSSDTFKVA bmy_12864T0/1-471 REEKSFPIAY SLVVHKDAIM VERLIHAIYN QHNIYCIHYD RKSSDTFKVA BACU006187/1-454 REEKSFPIAY SLVVHKDAIM VERLIHAIYN QHNIYCIHYD RKSSDTFKVA ENSTTRP00000016408/1-455 REEKSFPIAY SLVVHKDAIM VERLIHAIYN QHNIYCIHYD RKSSDTFKVA 201 250 ENSP00000317027/1-453 MNNLAKCFSN IFIASKLEAV EYAHISRLQA DLNCLSDLLK SSIQWKYVIN ENSBTAP00000003605/1-454 MNNLAKCFSN IFIASKLETV QYAHISRLQA DLNCLSDLLK SSVQWKYVIN bmy_12864T0/1-471 MNNLAKCFSN IFIASKLEIV QYAHISRLQA DLNCLSDLLE SSVQWKYVIN BACU006187/1-454 MNNLAKCFSN IFIASKLEIV QYAHISRLQA DLNCLSDLLK SSVQWKYVIN ENSTTRP00000016408/1-455 MNNLAKCFSN IFIASKLEVV QYAHISRLQA DLNCLSDLLK SSVQWKYVIN 251 300 ENSP00000317027/1-453 LCGQDFPLKS NFELVSELKK LNGANMLETV KPPNSKLERF TYHHELRRVP ENSBTAP00000003605/1-454 LCGQDFPLKS NFELVSELKK LNGSNMLETV KPPSTKTERF TYHHELKQAP bmy_12864T0/1-471 LCGQDFPLKS NFELVSELKK LNGSNMLETV KPPNTKMERF TYHHELRQVP BACU006187/1-454 LCGQDFPLKS NFELVSELKK LNGSNMLETV KPPNTKMERF TYHHELRQVP ENSTTRP00000016408/1-455 LCGQDFPLKS NFELVSELKK LNGSNMLETV KPPNTKMERF TYHHELRQVP 301 350 ENSP00000317027/1-453 YEYVKLPIRT NISKEAPPHN IQIFVGSAYF VLSQAFVKYI FNNSIVQDFF ENSBTAP00000003605/1-454 YEYVKLPMRT NISKEAPPHN IEIFVGSAYF VLSRAFVKYI FNNSFVKDFF bmy_12864T0/1-471 YEYVKLPVRT NISKEAPPHN IEIFVGSAYF VLSRAFVKYV LNNSLVKDFF BACU006187/1-454 YEYVKLPVRT NISKEAPPHN IEIFVGSAYF VLSRAFVKYV LNNSLVKDFF ENSTTRP00000016408/1-455 YEYVKLPVRT NVSKEAPPHD IEIFVGSAYF VVSRAFVKYV LNSSLVKDFF 351 400 ENSP00000317027/1-453 AWSKDTYSPD EHFWATLIRV PGIPGEISRS AQDVSDLQSK TRLVKWNYYE ENSBTAP00000003605/1-454 AWSKDTYSPD EHFWATLIRV PGIPGEISKT AQDVSDLQSK TRLVKWNYLE bmy_12864T0/1-471 AWSKDTYSPD EHFWATLIRV PGIPGEISGT AQDVSDLQSK TRLVKWNYLE BACU006187/1-454 AWSKDTYSPD EHFWATLIRV PGIPGGISRT AQDVSDLQSK TRLVKWNYLE ENSTTRP00000016408/1-455 AWSKDTYSPD EHFWATLIRV PGIPGEIPRT AQDVSDLQSK TRLVKWNYLE 401 450 ENSP00000317027/1-453 GFFYPSCTGS HLRSVCIYGA AELRWLIKDG HWFANKFDSK VDPILIKCLA ENSBTAP00000003605/1-454 GLFYPSCTGS HLRSVCIYGA AELRWLMKYG HWFANKFDSK VDPILIKCLA bmy_12864T0/1-471 GLFYPSCTGS HLRSVCIYGA AELRWLLKDG HWFANKFDSK VDPVLIKCLA BACU006187/1-454 GLFYPSCTGS HLRSVCIYGA AELRWLMKDG HWFANKFDSK VDPVLIKCLA ENSTTRP00000016408/1-455 GLFYPSCTGS HLRSVCIYGT AELRWLMKDG HWFANKFDSK VDPVLIQCLA 451 500 ENSP00000317027/1-453 EKLEEQQRDW ITLPSEKLFM DRNLTTTS- ENSBTAP00000003605/1-454 EKLEEQQRKW ITLSSAKLFM AKPSVTTS- bmy_12864T0/1-471 EKLEEQQREW ITLSSEKLFM AKTARTTL- BACU006187/1-454 EKLEEQQREW ITLSSEKLFM AKTATTTL- ENSTTRP00000016408/1-455 EKLEEQQREW ITLSSEKLFM AKTATTTLG