KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:21:36 2014 Check: 00 ..
Name: bmy_11999T0/1-275 Len: 334 Check: 2042 Weight: 1.00
Name: ENSP00000350512/1-334 Len: 334 Check: 4283 Weight: 1.00
Name: BACU011120/1-334 Len: 334 Check: 4283 Weight: 1.00
Name: ENSTTRP00000016258/1-334 Len: 334 Check: 4283 Weight: 1.00
Name: ENSBTAP00000003609/1-334 Len: 334 Check: 4608 Weight: 1.00
//
1 50
bmy_11999T0/1-275 MAASGSGMAQ KTWELANNMQ EAQSIDEIYK YDKKQQQEIL AAKPWTKDHH
ENSP00000350512/1-334 MAASGSGMAQ KTWELANNMQ EAQSIDEIYK YDKKQQQEIL AAKPWTKDHH
BACU011120/1-334 MAASGSGMAQ KTWELANNMQ EAQSIDEIYK YDKKQQQEIL AAKPWTKDHH
ENSTTRP00000016258/1-334 MAASGSGMAQ KTWELANNMQ EAQSIDEIYK YDKKQQQEIL AAKPWTKDHH
ENSBTAP00000003609/1-334 MAASGSGMAQ KTWELANNMQ EAQSVDEIYK YDKKQQQEIL AAKPWTKDHH
51 100
bmy_11999T0/1-275 YFKYCKISAL ALLKMVMHAR SGGNLEVMGL MLGKVDGETM IIMDSFALPV
ENSP00000350512/1-334 YFKYCKISAL ALLKMVMHAR SGGNLEVMGL MLGKVDGETM IIMDSFALPV
BACU011120/1-334 YFKYCKISAL ALLKMVMHAR SGGNLEVMGL MLGKVDGETM IIMDSFALPV
ENSTTRP00000016258/1-334 YFKYCKISAL ALLKMVMHAR SGGNLEVMGL MLGKVDGETM IIMDSFALPV
ENSBTAP00000003609/1-334 YFKYCKISAL ALLKMVMHAR SGGNLEVMGL MLGKVDGETM IIMDSFALPV
101 150
bmy_11999T0/1-275 EGTETRVNAQ AAAYEYMAAY IENAKQVGRL ENAIGWYHSH PGYGCWLSGI
ENSP00000350512/1-334 EGTETRVNAQ AAAYEYMAAY IENAKQVGRL ENAIGWYHSH PGYGCWLSGI
BACU011120/1-334 EGTETRVNAQ AAAYEYMAAY IENAKQVGRL ENAIGWYHSH PGYGCWLSGI
ENSTTRP00000016258/1-334 EGTETRVNAQ AAAYEYMAAY IENAKQVGRL ENAIGWYHSH PGYGCWLSGI
ENSBTAP00000003609/1-334 EGTETRVNAQ AAAYEYMAAY IENAKQVGRL ENAIGWYHSH PGYGCWLSGI
151 200
bmy_11999T0/1-275 DVSTQMLNQQ FQEPFVAVVC SLPNATS--- ----SFSTYP H---------
ENSP00000350512/1-334 DVSTQMLNQQ FQEPFVAVVI DPTRTISAGK VNLGAFRTYP KGYKPPDEGP
BACU011120/1-334 DVSTQMLNQQ FQEPFVAVVI DPTRTISAGK VNLGAFRTYP KGYKPPDEGP
ENSTTRP00000016258/1-334 DVSTQMLNQQ FQEPFVAVVI DPTRTISAGK VNLGAFRTYP KGYKPPDEGP
ENSBTAP00000003609/1-334 DVSTQMLNQQ FQEPFVAVVI DPTRTISAGK VNLGAFRTYP KGYKPPDEGP
201 250
bmy_11999T0/1-275 --YRLI---- ---------- YYALEVSYFK SSLDRKLLEL LWNKYWVNTL
ENSP00000350512/1-334 SEYQTIPLNK IEDFGVHCKQ YYALEVSYFK SSLDRKLLEL LWNKYWVNTL
BACU011120/1-334 SEYQTIPLNK IEDFGVHCKQ YYALEVSYFK SSLDRKLLEL LWNKYWVNTL
ENSTTRP00000016258/1-334 SEYQTIPLNK IEDFGVHCKQ YYALEVSYFK SSLDRKLLEL LWNKYWVNTL
ENSBTAP00000003609/1-334 SEYQTIPLNK IEDFGVHCKQ YYALEVSYFK SSLDRKLLEL LWNKYWVNTL
251 300
bmy_11999T0/1-275 SSSSLLTNAD YTTGQVFDLS EKLEQSEAQL GRGSFMLGLE THDRKSEDKL
ENSP00000350512/1-334 SSSSLLTNAD YTTGQVFDLS EKLEQSEAQL GRGSFMLGLE THDRKSEDKL
BACU011120/1-334 SSSSLLTNAD YTTGQVFDLS EKLEQSEAQL GRGSFMLGLE THDRKSEDKL
ENSTTRP00000016258/1-334 SSSSLLTNAD YTTGQVFDLS EKLEQSEAQL GRGSFMLGLE THDRKSEDKL
ENSBTAP00000003609/1-334 SSSSLLTNAD YTTGQVFDLS EKLEQSEAQL GRGSFMLGLE THDRKSEDKL
301 350
bmy_11999T0/1-275 AKATRDR--- ---------- ---------- ----
ENSP00000350512/1-334 AKATRDSCKT TIEAIHGLMS QVIKDKLFNQ INIS
BACU011120/1-334 AKATRDSCKT TIEAIHGLMS QVIKDKLFNQ INIS
ENSTTRP00000016258/1-334 AKATRDSCKT TIEAIHGLMS QVIKDKLFNQ INIS
ENSBTAP00000003609/1-334 AKATRDSCKT TIEAIHGLMS QVIKDKLFNQ INIS