KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:36 2014 Check: 00 .. Name: ENSTTRP00000007553/1-217 Len: 323 Check: 6132 Weight: 1.00 Name: ENSP00000262094/1-218 Len: 323 Check: 8258 Weight: 1.00 Name: ENSBTAP00000003613/1-218 Len: 323 Check: 8056 Weight: 1.00 Name: BACU014885/1-295 Len: 323 Check: 8524 Weight: 1.00 Name: bmy_06131T0/1-246 Len: 323 Check: 193 Weight: 1.00 // 1 50 ENSTTRP00000007553/1-217 ---------- ---------- --------MT DGDYDYLIKL LALGDSGVGK ENSP00000262094/1-218 ---------- ---------- --------MT DGDYDYLIKL LALGDSGVGK ENSBTAP00000003613/1-218 ---------- ---------- --------MT DGDYDYLIKL LALGDSGVGK BACU014885/1-295 ---------- ---------- --------MT DGDYDYLIKL LALGDSGVGK bmy_06131T0/1-246 MRTFRMSTSP IETFLSVPSG FRPTKTITMT DGDYDYLIKL LALGDSGVGK 51 100 ENSTTRP00000007553/1-217 TTFLYRYTDN KFNPKFITTV GIDFREKRVV YNTQGPNGST GKAVKVHLQL ENSP00000262094/1-218 TTFLYRYTDN KFNPKFITTV GIDFREKRVV YNAQGPNGSS GKAFKVHLQL ENSBTAP00000003613/1-218 TTFLYRYTDN KFNPKFITTV GIDFREKRVA YNTQGPNGPT GKAFKVHLQL BACU014885/1-295 TTFLYRYTDN KFNPKFITTV GIDFREKRVV YNTQGPNGST GKAFKVHLQL bmy_06131T0/1-246 TTFLYCYTDN KFNPKFITTV GIDFREKRVV YNTQGPNGST GKAFKVHLQL 101 150 ENSTTRP00000007553/1-217 WDTAGQERFR SLTTAFFRDA MGFLLMFDLT SQQSFLNVRN WMXXXXXXXX ENSP00000262094/1-218 WDTAGQERFR SLTTAFFRDA MGFLLMFDLT SQQSFLNVRN WMSQLQANAY ENSBTAP00000003613/1-218 WDTAGQERFR SLTTAFFRDA MGFLLMFDLT SQQSFLNVRN WMSQLQANAY BACU014885/1-295 WDTAGQERFR SLTTAFFRDA MGFLLTFDLT SQQSFLNVRN WMSQLQANAY bmy_06131T0/1-246 WDTAGQERFR SLTTAFFRDA MGFLLMFDLT SQQSFLNVRN WMSQLQANAY 151 200 ENSTTRP00000007553/1-217 XENPDIVL-G NKADLSDQRE VNERQARDLA DKYSIPYFET SAATGQNVEK ENSP00000262094/1-218 CENPDIVLIG NKADLPDQRE VNERQARELA DKYGIPYFET SAATGQNVEK ENSBTAP00000003613/1-218 CENPDIVLIG NKADLPDQRE VNERQARDLA EKYSIPYFET SAATGQNVEK BACU014885/1-295 CENPDIVLIG NKADLPDQRE VNERQARDLA DKYGIPYFET SAATGQNVEK bmy_06131T0/1-246 CENPDIVLIG NKADLPDQRE VNERQARDLA DKYGIPYFET SAATGQNVEK 201 250 ENSTTRP00000007553/1-217 AVETLLDLIM KRMEQCVEKT QVPDTVNGGS SGKLDGDKPA EKK------- ENSP00000262094/1-218 AVETLLDLIM KRMEQCVEKT QIPDTVNGGN SGNLDGEKPP EKK------- ENSBTAP00000003613/1-218 AVETLLDLIM KRMEQCVEKT HIPDTVNGSS SGKLDGEKSA EKK------- BACU014885/1-295 AVETLLDLIM KRMEQCVEKT QVPDTINGGS SGKLDGDKPA EKKLSFQMFL bmy_06131T0/1-246 AVETLLDLIM KRMEQCVEKT QVPDTVNGGS SGKLDGDKTA EKK------- 251 300 ENSTTRP00000007553/1-217 ---------- ---------- ---------- --------CA C--------- ENSP00000262094/1-218 ---------- ---------- ---------- --------CI C--------- ENSBTAP00000003613/1-218 ---------- ---------- ---------- --------CA C--------- BACU014885/1-295 ERKPSIIERK VAKKNNLGAM DLESETFQRR LMPKVDLPVG CMGRPEVFQG bmy_06131T0/1-246 ---------- ---------- ---------- --------CA C--------- 301 350 ENSTTRP00000007553/1-217 ---------- ---------- --- ENSP00000262094/1-218 ---------- ---------- --- ENSBTAP00000003613/1-218 ---------- ---------- --- BACU014885/1-295 YSCTESSGPE RHSFLRYKFT SEE bmy_06131T0/1-246 ---------- ---------- ---