KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:21:38 2014 Check: 00 .. Name: ENSP00000361932/1-492 Len: 493 Check: 2685 Weight: 1.00 Name: ENSBTAP00000003617/1-493 Len: 493 Check: 4809 Weight: 1.00 Name: bmy_08682T0/1-259 Len: 493 Check: 7634 Weight: 1.00 Name: ENSTTRP00000011451/1-492 Len: 493 Check: 3009 Weight: 1.00 // 1 50 ENSP00000361932/1-492 MAAGPIRVVL VLLGVLSVCA ASGHGSVAER EAGGEAEWAE PWDGAVFRPP ENSBTAP00000003617/1-493 MGAGRPGSVL AVVGVLGVCA TRGPGLAAEG KTGGEAEWAE PWDGAVFRPP bmy_08682T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011451/1-492 MGAGRTGAVL AALGVLSVCA ASGSRPVAEG ETGGEVEWAE PWDGAVFRLP 51 100 ENSP00000361932/1-492 SALGAVGVTR SSGTPRPGRE EAGDLPVLLW WSPGLFPHFP GDSERIECAR ENSBTAP00000003617/1-493 SALGAVGVAR SPGAPRPGRE EAVDLPVLLW WSPGLFPHFP GDSERIECAR bmy_08682T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011451/1-492 SALGAVGVAX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 101 150 ENSP00000361932/1-492 GACVASRNRR ALRDSRTRAL LFYGTDFRAS AAPLPRLAHQ SWALLHEESP ENSBTAP00000003617/1-493 GACVASRDRR VRGDSRTRAL LFYGTDFRAS EAPLPRLAHQ SWALLHEESP bmy_08682T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011451/1-492 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 151 200 ENSP00000361932/1-492 LNNFLLSHGP GIRLFNLTST FSRHSDYPLS LQWLPGTAYL RRPVPPPMER ENSBTAP00000003617/1-493 LNNFLLSHGP GIRLFNLTST FSRYSDYPLP LQWLPGIAYL RRAAPPLEER bmy_08682T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011451/1-492 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 201 250 ENSP00000361932/1-492 AEWRRRGYAP LLYLQSHCDV PADRDRYVRE LMRHIPVDSY GKCLQNRELP ENSBTAP00000003617/1-493 AEWRRRGYAP LLYLQSHCDV PADRDRYVRE LMRYIPVDSY GKCLQNRELP bmy_08682T0/1-259 ---------- ---------- ---------- ----TQVDSY GKCLKNRELP ENSTTRP00000011451/1-492 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXLP 251 300 ENSP00000361932/1-492 TARLQDTATA TTEDPELLAF LSRYKFHLAL ENAICNDYMT EKLWRPMHLG ENSBTAP00000003617/1-493 APRLRDTATA TTEDPELLAF LSRYKFHLAL ENAICDDYMT EKLWRPMHLG bmy_08682T0/1-259 TPRLQDTATA TTEDPELLAF LSRYKFHLAL ENAICDDYMT EKLWRPMHLG ENSTTRP00000011451/1-492 TPRLQDTATA TTEDPELLAF LSRYKFHLAL ENAICDDYM- EKLWRPMHLG 301 350 ENSP00000361932/1-492 AVPVYRGSPS VRDWMPNNHS VILIDDFESP QKLAEFIDFL DKNDEEYMKY ENSBTAP00000003617/1-493 AVPVYRGSPS VRDWMPNNHS IILIDDFESP QKLAEFIDFL DKNDEEYMKY bmy_08682T0/1-259 AVPVYRGSPS VRDWVPNNHS IILIDDFESP QKLAEFIDFL DKNDEEYMKY ENSTTRP00000011451/1-492 AVPVYRGSPS VRDWVPNNHS IILIDDFESP QKLAEFIDFL DKNDEEYMKY 351 400 ENSP00000361932/1-492 LAYKQPGGIT NQFLLDSLKH REWGVNDPLL PNYLNGFECF VCDYELARLD ENSBTAP00000003617/1-493 LAYKQPGGIT NQFLLDSLKQ REWGVNDPLL PNYLNGFECF VCDHELARLD bmy_08682T0/1-259 LAYKQPGGIT NQFLLDSLKQ REWGVNDPLL PNYLNGFECF VCDHELARLD ENSTTRP00000011451/1-492 LAYKQPGGIT NQFLLDSLKQ REWGVNDPLL PNYLNGFECF VCDHELARLD 401 450 ENSP00000361932/1-492 AEKAHAASPG DSPVFEPHIA QPSHMDCPVP TPGFGNVEEI PENDSWKEMW ENSBTAP00000003617/1-493 AEKAHAASPG NIPVPEPYIA QPSHMDCPVP TPGFGSVEEI PENDSWKEMW bmy_08682T0/1-259 AEKAHAASPG DIPVPEPHIA QPSHMDCPVP TPGFGSVEEI PENDSWKEMW ENSTTRP00000011451/1-492 AEKAHAASPG DIPVPEPHIA QPSHMDCPVP TPGFGSVEEI PENDSWKEMW 451 500 ENSP00000361932/1-492 LQDYWQGLDQ GEALTAMIHN NETEQTKFWD YLHEIFMKR- QHL ENSBTAP00000003617/1-493 LQDYWQGLDQ GEALTAMIHN NETLQGKFWD YLTEIFMKRN QNL bmy_08682T0/1-259 LQDYWQGLDQ GEALTAMIHN NETLQRKFWD YLTEIFMKRN QNL ENSTTRP00000011451/1-492 LQDYWQGLDQ GEALTAMIHN NETLQRKFWD YLTEIFMKRN QNL