KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:40 2014 Check: 00 .. Name: ENSTTRP00000000464/1-587 Len: 605 Check: 3674 Weight: 1.00 Name: ENSP00000312397/1-587 Len: 605 Check: 8498 Weight: 1.00 Name: ENSBTAP00000003625/1-589 Len: 605 Check: 9036 Weight: 1.00 Name: bmy_18924T0/1-497 Len: 605 Check: 1297 Weight: 1.00 Name: BACU018375/1-577 Len: 605 Check: 8237 Weight: 1.00 // 1 50 ENSTTRP00000000464/1-587 LEVH------ ---------- SIKLSSQPPI QAGDDEKNQR TITVNPAHMG ENSP00000312397/1-587 ---------- ------MEGE SVKLSSQTLI QAGDDEKNQR TITVNPAHMG ENSBTAP00000003625/1-589 LPVH------ ---------- SIKPSSQPLI QTGDDEKNQR TITVNPAHMG bmy_18924T0/1-497 --MHSSAAAT LAGPHTMDGE SIKLSSQPPI QAGDDEKNQR TITVNPAHMG BACU018375/1-577 --VH------ ---------- SIKLSSQPPI QAGDDEKNQR TITVNPAHMG 51 100 ENSTTRP00000000464/1-587 KAFKVMNELR SKQLLCDVVI VAEDVEIEAH RVVLAACSPY FCAMFTGDMS ENSP00000312397/1-587 KAFKVMNELR SKQLLCDVMI VAEDVEIEAH RVVLAACSPY FCAMFTGDMS ENSBTAP00000003625/1-589 KAFKVMNELR SKQLLCDVMI VAEDVEIEAH RVVLAACSPY FCAMFTGDMS bmy_18924T0/1-497 KAFKVMNELR SKQLLCDVVI VAEDVEIEAH RVVLAACSPY FCAMFTGDMS BACU018375/1-577 KAFKVMNELR SKQLLCDVVI VAEDVEIEAH RVVLAACSPY FCAMFTGDMS 101 150 ENSTTRP00000000464/1-587 ESKAKKIEIK DVDGQTLSKL IDYIYTAEIE VTEENVQVLL PAASLLQLMD ENSP00000312397/1-587 ESKAKKIEIK DVDGQTLSKL IDYIYTAEIE VTEENVQVLL PAASLLQLMD ENSBTAP00000003625/1-589 ESKAKKIEIK DVDGQTLSKL IDYIYTAEIE VTEENVQVLL PAASLLQLMD bmy_18924T0/1-497 ESKAKKIEIK DVDGQTLSKL IDYIYTAEIE -------VLL PAASLLQLMD BACU018375/1-577 ESKAKKIEIK DVDGQTLSKL IDYIYTAEIE VTEENVQVLL PAASLLQLMD 151 200 ENSTTRP00000000464/1-587 VRQNCCDFLQ SQLHPTNCLG IRAFADVHTC TDLLQQANAY A--EQHFPEV ENSP00000312397/1-587 VRQNCCDFLQ SQLHPTNCLG IRAFADVHTC TDLLQQANAY A--EQHFPEV ENSBTAP00000003625/1-589 VRQNCCDFLQ SQLHPTNCLG IRAFADVHTC TDLLQQANAY AGTEQHFPEV bmy_18924T0/1-497 VRQNCCDFLQ SQLHPTNCLG IRAFADVHTC TDLLQQANAY A--EQHFPEV BACU018375/1-577 VRQNCCDFLQ SQLHPTNCLG IRAFADVHTC TDLLQQANAY A--EQHFPEV 201 250 ENSTTRP00000000464/1-587 MLGEEFLSLS LDQVCSLISS DKLTVSSEEK VFEAVISWIN YEKETRLEHM ENSP00000312397/1-587 MLGEEFLSLS LDQVCSLISS DKLTVSSEEK VFEAVISWIN YEKETRLEHM ENSBTAP00000003625/1-589 MLGEEFLSLS LDQVCSLISS DKLTVSSEEK VFEAVISWIN YEKETRLEHM bmy_18924T0/1-497 MLGEEFLSLS LDQVCSLISS DKLTVSSEEK VFEAVISWIN YEKETRLEHM BACU018375/1-577 MLGEEFLSLS LDQVCSLISS DKLTVSSEEK VFEAVISWIN YEKETRLEHM 251 300 ENSTTRP00000000464/1-587 AKLMEHVRLP LLPRDYLVQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000312397/1-587 AKLMEHVRLP LLPRDYLVQT VEEEALIKNN NTCKDFLIEA MKYHLLPLDQ ENSBTAP00000003625/1-589 AKLMEHVRLP LLPRDYLVQT VEEEALIKNN NTCKDFLIEA MKYHLLPLDQ bmy_18924T0/1-497 AKLMEHVRLP LLPRDYLVQ- ---------- ---------- ---------- BACU018375/1-577 AKLMEHVRLP LLPRDYLVQT VEEEALIKNN NTCKDFLIEA MKYHLLPLDQ 301 350 ENSTTRP00000000464/1-587 XXXXXXXXXX XXXXXXXXXV MIVVGGQAPK AIRSVECYDF EEDRWDQIAE ENSP00000312397/1-587 RLLIKNPRTK PRTPVSLPKV MIVVGGQAPK AIRSVECYDF EEDRWDQIAE ENSBTAP00000003625/1-589 RLLIKNPRTK PRTPVSLPKV MIVVGGQAPK AIRSVECYDF EEDRWDQIAE bmy_18924T0/1-497 ---------- ---------V MIVVGGQAPK AIRSVECYDF EEDRWDQIAE BACU018375/1-577 RLLIKNPRTK PRTPVSLPKV MIVVGGQAPK AIRSVECYDF EEDRWDQIAE 351 400 ENSTTRP00000000464/1-587 LPSRRCRAXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000312397/1-587 LPSRRCRAGV VFMAGHVYAV GGFNGSLRVR TVDVYDGVKD QWTSIASMQE ENSBTAP00000003625/1-589 LPSRRCRAGV VFMAGHVYAV GGFNGSLRVR TVDVYDGVKD QWTSIASMQE bmy_18924T0/1-497 LPSRRCRAGV VFMAGHVYAV GGFNGSLRVR TVDVYDGVKD QWTSIASMQE BACU018375/1-577 LPSRRCRAGV VFMAGHVYAV GGFNGSLRVR TVDVYDGVKD QWTSIASMQE 401 450 ENSTTRP00000000464/1-587 XXXXXXXXXX XXXXXXXXXX XXXXXLASVE AYSYKTNEWF FVAPMNTRRS ENSP00000312397/1-587 RRSTLGAAVL NDLLYAVGGF DGSTGLASVE AYSYKTNEWF FVAPMNTRRS ENSBTAP00000003625/1-589 RRSTLGAAVL NDLLYAVGGF DGSTGLASVE AYSYKTNEWF FVAPMNTRRS bmy_18924T0/1-497 RRSTLGAAVL NDLLYAVGGF DGSTGLASVE AYSYKTNEWF FVAPMNTRRS BACU018375/1-577 RRSTLGAAVL NDLLYAVGGF DGSTGLASVE AYSYKTNEWF FVAPMNTRRS 451 500 ENSTTRP00000000464/1-587 SVGVGVVEGK LYAVGGYDGA SRQCLSTVEQ YNPATNEWTY VADMSTRRSG ENSP00000312397/1-587 SVGVGVVEGK LYAVGGYDGA SRQCLSTVEQ YNPATNEWIY VADMSTRRSG ENSBTAP00000003625/1-589 SVGVGVVEGK LYAVGGYDGA SRQCLSTVEQ YNPATNEWTY VADMSTRRSG bmy_18924T0/1-497 SVGVGVVEGK LYAVGGYDGA SRQCLSTVEQ YNPATNEWTY VADMSTRRSG BACU018375/1-577 SVGVGVVEGK LYAVGGYDGA SRQCLSTVEQ YNPATNEWTY VADMSTRRSG 501 550 ENSTTRP00000000464/1-587 AGVGVLSGQL YATGGHDGPL VRKSVEVYDP GTNTWKQVAD MNMCRRNAGV ENSP00000312397/1-587 AGVGVLSGQL YATGGHDGPL VRKSVEVYDP GTNTWKQVAD MNMCRRNAGV ENSBTAP00000003625/1-589 AGVGVLSGQL YATGGHDGPL VRKSVEVYDP GTNTWKQVAD MNMCRRNAGV bmy_18924T0/1-497 AGV------- ---------- ---------- ---------- ---------- BACU018375/1-577 AGVGVLSGQL YATGGHDGPL VRKSVEVYDP GTNTWKQVAD MNMCRRNAGV 551 600 ENSTTRP00000000464/1-587 CAVNGLLYVV GGDDGSCNLA SVEYYNPVAD KWTLLPSNMS TGRSYAGVAV ENSP00000312397/1-587 CAVNGLLYVV GGDDGSCNLA SVEYYNPVTD KWTLLPTNMS TGRSYAGVAV ENSBTAP00000003625/1-589 CAVNGLLYVV GGDDGSCNLA SVEYYNPVTD KWTLLPTNMS TGRSYAGVAV bmy_18924T0/1-497 CAVNGLLYVV GGDDGSCNLA SVEYYNPVTD KWTLLPSNMS TGRSYAGVAV BACU018375/1-577 CAVNGLLYVV GGDDGSCNLA SVEYYNPVTD KWTLLPSNMS TGRSYAG--- 601 650 ENSTTRP00000000464/1-587 IHKPL ENSP00000312397/1-587 IHKSL ENSBTAP00000003625/1-589 IHKPL bmy_18924T0/1-497 IHKPL BACU018375/1-577 -----