KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:41 2014 Check: 00 .. Name: ENSP00000247930/1-831 Len: 1297 Check: 3359 Weight: 1.00 Name: ENSBTAP00000003635/1-832 Len: 1297 Check: 2792 Weight: 1.00 Name: ENSTTRP00000014871/1-831 Len: 1297 Check: 9121 Weight: 1.00 Name: bmy_20284T0/1-657 Len: 1297 Check: 2788 Weight: 1.00 Name: BACU010914/1-1264 Len: 1297 Check: 9373 Weight: 1.00 // 1 50 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 MAEKKLADCE KTAVELGNQL EGKWAVLGTL LQEYGLLQRR LENVENLLRN 51 100 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 RNFWILRLPP GSKGEAPKEW GKLDEWQKEL YKHVMRGNYE TLVSLDYAIS 101 150 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 KPEVLSQIEQ GKEPCSWRRA GPKVPDVPVD PSPGSGPPVP APDLLMQIKQ 151 200 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 EGELQLQEQQ TLGVEAWAAG QPDIGEEPWG LSQLDSGAGD VSTDAASGVH 201 250 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 SNFSTTIPPT SWQADLPPHH PSSACSDGSL KLSTAASTEA DVKIVIKTEV 251 300 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 QEEEVVATPV HPTDLEAHAT LFGPGQATRF FPSPVQEGAW ESQGSSFPSQ 301 350 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 DAVLGLREPA RPERELGEPS PAVTQDETPP GDWLFGGVRW GWNFRCKPPA 351 400 ENSP00000247930/1-831 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003635/1-832 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014871/1-831 ---------- ---------- ---------- ---------- ---------- bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------- BACU010914/1-1264 GLNPRTGPEG LPYSTSDNGE AVLDPGQAPR PFSDPCKYPG RTKGFSHKPG 401 450 ENSP00000247930/1-831 ---------- ---------- ---------- -MENQRSSPL SFPSVPQEET ENSBTAP00000003635/1-832 ---------- ---------- ---------- -METQRSSPL SFPNVLQEET ENSTTRP00000014871/1-831 ---------- ---------- ---------- -METQRSSPL SFPNVVQEET bmy_20284T0/1-657 ---------- ---------- ---------- -METQRSSPL SFPNVVQEET BACU010914/1-1264 LKKHPAAPPG GRPFTCAACG KSFQLQVQQL DMETQRSSPL SFPNVVQEET 451 500 ENSP00000247930/1-831 LRQAPAGLPR ETLFQSRVLP PKEIPSLSPT IPRQGSLPQT SSAPKQETSG ENSBTAP00000003635/1-832 PRQVPAGLPR ETLFQSHVLP PKELPSLSPA VSRQGCLPQT PGAPKQETSG ENSTTRP00000014871/1-831 PRQAPAGLPR ETLFQSHVLP PKEVPSLSPA IPRQGSLPQT PSAPKQQTSG bmy_20284T0/1-657 PRQTPAGLPR ETLFQSHVLP HKEIPSLSPA IPRQGSLPQT PSAPKHETSG BACU010914/1-1264 PRQTPAGLPR ETLFQSHVLP PKEIPSLSPA IPRQGSLPQT PSAPKHETSG 501 550 ENSP00000247930/1-831 RMPHVLQKGP SLLCSAASEQ ETSLQGPLAS QEGTQYPPPA A--AEQEVSL ENSBTAP00000003635/1-832 RMPPVLQKGP SLLYPGAPEQ ETRIQGPLTS PEEPPYPPPA A--AEQEMSL ENSTTRP00000014871/1-831 RMPHVLQKGP SLLYPAASEQ ETQIQGPLTS QEEAPYLPPA A--AEPEISL bmy_20284T0/1-657 RMPHVLQKGP SLLYHAASEQ ETQIQGPLTS QEEAPYPPPA A--AEPEISL BACU010914/1-1264 RMPHVLQKGP SLLYHAASEQ ETQLQGPLTS QAEAPYPPPA AXXXEPEISL 551 600 ENSP00000247930/1-831 LSHSPHHQEA PVHSPEAPEK DPLTLSPTVP ETDMDPLLQS PVSQKDTPFQ ENSBTAP00000003635/1-832 LSHSAHHQEA PLHSPEVPER DPLTLSPTVP ETDMDPLLQS PVSQKDTPFQ ENSTTRP00000014871/1-831 LSHSTHHQEA PLHSPEVPER DPLTLSPTVP ETDMDPLLQS PVSQKDTPFQ bmy_20284T0/1-657 LSHSTHHQEA PLHSPEVPER DPLTLSPTVP ETDMDPLLQS PVSQKDTPFQ BACU010914/1-1264 LSHSTHHQEA PLHSPEVPER DPLTLSPTVP ETDMDPLLQS PVSQKDTPFQ 601 650 ENSP00000247930/1-831 ISSAVQKEQP LPTAEITRLA VWAAVQAVER KLEAQAMRLL TLEGRTGTNE ENSBTAP00000003635/1-832 ISAAAQKDTP LPTAEITRLA VWAAVQAVER KLEAQAMRLL TLEGRTGTNE ENSTTRP00000014871/1-831 ISSAAQKDTP LPTAEITRLA VWAAVQAVER KLEAQAMRLL TLEGRTGTNE bmy_20284T0/1-657 ISSAAQKDTP LPTAEITRLA VWAAVQAVER KLEAQAMRLL TLEGRTGTNE BACU010914/1-1264 ISSAAQKDTP LPTAEITRLA VWAAVQAVER KLEAQAMRLL TLEGRTGTNE 651 700 ENSP00000247930/1-831 KKIADCEKTA VEFANHLESK WVVLGTLLQE YGLLQRRLEN MENLLKNRNF ENSBTAP00000003635/1-832 KKIADCEKTA VEFANHLESK WVVLGTLLQE YGLLQRRLEN MENLLKNRNF ENSTTRP00000014871/1-831 KKIADCEKTA VEFANHLESK WVVLGTLLQE YGLLQRRLEN MENLLKNRNF bmy_20284T0/1-657 KKIADCEKTA VEFANHLESK WVVLGTLLQE YGLLQRRLEN MENLLKNRNF BACU010914/1-1264 KKIADCEKTA VEFANHLESK WVVLGTLLQE YGLLQRRLEN MENLLKNRNF 701 750 ENSP00000247930/1-831 WILRLPPGSN GEVPKVPVTF DDVAVHFSEQ EWGNLSEWQK ELYKNVMRGN ENSBTAP00000003635/1-832 WILRLPPGSN GEVPKVPVTF DDVAVHFSEQ EWGNLSEWQK ELYKNVMRGN ENSTTRP00000014871/1-831 WILRLPPGSN GEVPKVPVTF DDVAVHFSEQ EWGNLSEWQK ELYKNVMRGN bmy_20284T0/1-657 WILRLPPGSN GE---VPVTF DDVAVHFSEQ EWGNLSEWQK ELYKNVMRGN BACU010914/1-1264 WILRLPPGSN GEVPKVPVTF DDVAVHFSEQ EWGNLSEWQK ELYKNVMRGN 751 800 ENSP00000247930/1-831 YESLVSMDYA ISKPDLMSQM ERGERPTMQE QEDSEEGETP TDPS------ ENSBTAP00000003635/1-832 YESLVSMDYA ISKPDLMSQM ERGERPAMQE QEDSEEGEAP ADPS------ ENSTTRP00000014871/1-831 YESLVSMDYA ISKPDLMSQM ERGERPAMQE QEDSEEGEAP ADPS------ bmy_20284T0/1-657 YESLVSMDYA ISKPDLMSQM ERGERPVMQE PEDSEEGEAP ADPS------ BACU010914/1-1264 YESLVSMDYA ISKPDLMSQM ERGERPVMQE PEDSEEGEAP ADPSAEPKLT 801 850 ENSP00000247930/1-831 ---------- ---------- ------AAHD GIVIKIEVQT NDEGSESLET ENSBTAP00000003635/1-832 ---------- ---------- ------AAHD GIVIKIEVQT NDEGSESLET ENSTTRP00000014871/1-831 ---------- ---------- ------AAHD GIVIKIEVQT NDEGSESLET bmy_20284T0/1-657 ---------- ---------- ------AAHD GIVIKIEVQT NDEGSESLET BACU010914/1-1264 ERRSLVRMLV LVSLELPEEG HVPGPVAAHD GIVIKIEVQT NDEGSESLET 851 900 ENSP00000247930/1-831 PEPLMGQVEE HGFQDSELGD PCGEQPDLDM QEPENTLEES TEGSSEFSEL ENSBTAP00000003635/1-832 PEPLMGQVEE HGFQDSELGD PCGEQPDLDM QEPENPLEAS TEGSGEFSEL ENSTTRP00000014871/1-831 PEPLMGQVEE HGFQDSELGD PCGEQPDLDM QEPENPLEAS TESSGEFSEL bmy_20284T0/1-657 PEPLMGQVEE HGFQDSELGD PCGEQPDLDM QEPENPLEAS TESSGEFSEL BACU010914/1-1264 PEPLMGQVEE HGFQDSDLGD PCGEQPDLDM QEPENPLEAS TESSGEFSEL 901 950 ENSP00000247930/1-831 KQMLVQQRNC TEGIVIKTEE QDEEEEEEEE DELPQHLQSL GQLSGRYEAS ENSBTAP00000003635/1-832 KQMLVQQRNC AEGIVIKTEE QEEEEEDEED DELPQHLQSL GQLSGRYETG ENSTTRP00000014871/1-831 KQMLAQQRNC AEGIVIKTEE QDDEDDEDDE DELPQRLQPL GQLSGRYEAG bmy_20284T0/1-657 KQMLAQQRNC A--------- ---------- ---------- ---------- BACU010914/1-1264 KQMLVQQRNC AEGIVIKTEE QEEEEEEEEE DELPQHLQSL GQLSGRYEAA 951 1000 ENSP00000247930/1-831 MYQTPLPGEM SPEGEESPPP LQLGNPAVKR LAPSVHGERH LSENRGASSQ ENSBTAP00000003635/1-832 LYPTPLPGEL SPEGEESPPP LQLGNPAVKR LAPPSHGERH PGENRGSGSQ ENSTTRP00000014871/1-831 MYPPPLPGEL SPEGEESPPP LQLGNPAVKR LAPPSHGERH PGENRGAASQ bmy_20284T0/1-657 ---------- ---------- ---------- ------GEWG AG-------- BACU010914/1-1264 MYPTPLP--- ---------- --LGTPAVKR LAPPSHGERH PGENRGAASQ 1001 1050 ENSP00000247930/1-831 QQRNRRGERP FTCMECGKSF RLKINLIIHQ RNHIKEGPYE CAECEISFRH ENSBTAP00000003635/1-832 QQRNRRGERP FTCMECGKSF RLKINLIIHQ RNHIKEGPYE CAECEVSFRH ENSTTRP00000014871/1-831 QQRNRRGERP FTCMECGKSF RLKINLVIHQ RNHIKEGPYE CAECEVSFRH bmy_20284T0/1-657 ---------- ---------- ---------- ---------A CGEAVVSFR- BACU010914/1-1264 QQRNRRGERP FTCMECGKSF RLKINLIIHQ RNHIKEGPYE CAECEVSFRH 1051 1100 ENSP00000247930/1-831 KQQLTLHQRI HRVRGGCVSP ERGPTFNPKH ALKPRPKSPS SGSG-GGGPK ENSBTAP00000003635/1-832 KQQLTLHQRI HRVRGGYASP ERGPGFTPKH ALKPRPKSPS SGGGSGGGPK ENSTTRP00000014871/1-831 KQQLTLHQRI HRVRGGYASP ERGPGFAPKH ALKPRPKSPS SGSG-GGGPK bmy_20284T0/1-657 ---------- ---------- ---------- ---------- ---------E BACU010914/1-1264 KQQLTLHQRI HR-------- ---------H ALKPRPKSPS SGSG-GGGPK 1101 1150 ENSP00000247930/1-831 PYKCPECDSS FSHKSSLTKH QITHTGERPY TCPECKKSFR LHISLVIHQR ENSBTAP00000003635/1-832 PYKCPECDSS FSHKSSLTKH QITHTGERPY TCPECKKSFR LHISLVIHQR ENSTTRP00000014871/1-831 PYKCPECDSS FSHKSSLTKH QITHTGERPY TCPECKKSFR LHISLVIHQR bmy_20284T0/1-657 PYKCPECDSS FSHKSSLTKH QITHTGERPY TCPECKKSFR LHISLVIHQR BACU010914/1-1264 PYKCPECDSS FSHKSSLTKH QITHTGERPY TCPECKKSFR LHISLVIHQR 1151 1200 ENSP00000247930/1-831 VHAGKHEVSF ICSLCGKSFS RPSHLLRHQR THTGERPFKC PECEKSFSEK ENSBTAP00000003635/1-832 VHAGKHEVSF ICSLCGKSFS RPSHLLRHQR THTGERPFKC PECEKSFSEK ENSTTRP00000014871/1-831 VHAGKHEVSF ICSLCGKSFS RPSHLLRHQR THTGERPFKC PECEKSFSEK bmy_20284T0/1-657 VHAGKHEVSF ICSLCGKSFS RPSHLLRHQR THTGERPFKC PECEKSFSEK BACU010914/1-1264 VHAGKHEVSF ICSLCGKSFS RPSHLLRHQR THTGERPFKC PECEKSFSEK 1201 1250 ENSP00000247930/1-831 SKLTNHCRVH SRERPHACPE CGKSFIRKHH LLEHRRIHTG ERPYHCAECG ENSBTAP00000003635/1-832 SKLTNHCRVH SRERPHACPE CGKSFIRKHH LLEHRRIHTG ERPYHCAECG ENSTTRP00000014871/1-831 SKLTNHCRVH SRERPHACPE CGKSFIRKHH LLEHRRIHTG ERPYHCAECG bmy_20284T0/1-657 SKLTNHCRVH SRERPHACPE CGKSFIRKHH LLEHRRIHTG ERPYHCAECG BACU010914/1-1264 SKLTNHCRVH SRERPHACPE CGKSFIRKHH LLEHRRIHTG ERPYHCAECG 1251 1300 ENSP00000247930/1-831 KRFTQKHHLL EHQRAHTGER PYPCTHCAKC FRYKQSLKYH LRTHTGE ENSBTAP00000003635/1-832 KRFTQKHHLL EHQRAHTGER PYPCTHCAKC FRYKQSLKYH LRTHTGE ENSTTRP00000014871/1-831 KRFTQKHHLL EHQRAHTGER PYPCTHCAKC FRYKQSLKYH LRTHTGE bmy_20284T0/1-657 KRFTQKHHLL EHQRAHTGER PYPCTHCAKC FRYKQSLKYH LRTHTGE BACU010914/1-1264 KRFTQKHHLL EHQRAHTGER PYPCTHCAKC FRYKQSLKYH LRTHTGE