KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:45 2014 Check: 00 .. Name: bmy_11460T0/1-244 Len: 327 Check: 1135 Weight: 1.00 Name: ENSP00000352513/1-269 Len: 327 Check: 1842 Weight: 1.00 Name: ENSTTRP00000008105/1-267 Len: 327 Check: 652 Weight: 1.00 Name: BACU004244/1-235 Len: 327 Check: 4742 Weight: 1.00 Name: ENSBTAP00000003653/1-269 Len: 327 Check: 2747 Weight: 1.00 // 1 50 bmy_11460T0/1-244 ---------- ---------- ---------- ---------- ---------- ENSP00000352513/1-269 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008105/1-267 GPRSGRRAGW QRLGPERGLR RGGASRRGRR RVRSPRAGAE LTAVGTGAQS BACU004244/1-235 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003653/1-269 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_11460T0/1-244 ---------- ---------- --------MA KSAHCVEKVT AGVSALEVYT ENSP00000352513/1-269 --------MA ASAGAGAVIA APDSRRWLWS VLAAALGLLT AGVSALEVYT ENSTTRP00000008105/1-267 RGDCGRRTMA APAGAGALIA SPDRRRWLWS VFAVALGLLT AGVSALEVYT BACU004244/1-235 ---------- ---------- ---------- ---------- --VSALEVYT ENSBTAP00000003653/1-269 --------MA APAGAGALIA SPDRRRCLWS VLAAALGLLT YGVSALEVYT 101 150 bmy_11460T0/1-244 PKEIFVANGT QGKLTCKFKS TNTTGTLTSV SWSFQPEGTD TTVSFFHYSQ ENSP00000352513/1-269 PKEIFVANGT QGKLTCKFKS TSTTGGLTSV SWSFQPEGAD TTVSFFHYSQ ENSTTRP00000008105/1-267 PKEIFVANGT QGKLTCKFKS TNTTGTLTSV SWSFQPEGTD TTVSFFHYSQ BACU004244/1-235 PKEIFVANGT QGKLTCKFKS TNTTGTLTSV SWSFQPEGTD TTVSFFHYSQ ENSBTAP00000003653/1-269 PKEIFVANGT QGKLTCKFKS TNTTGTLTSV SWSFQPEGTD TTVSFFHYSQ 151 200 bmy_11460T0/1-244 GQVYAGNYPP FKDRISWAGD LDKKDASINI ENMQFIHNGT YICDVKNPPD ENSP00000352513/1-269 GQVYLGNYPP FKDRISWAGD LDKKDASINI ENMQFIHNGT YICDVKNPPD ENSTTRP00000008105/1-267 GQVYAGNYPP FKDRISWAGD LDKKDASINI ENMQFIHNGT YICDVKNPPD BACU004244/1-235 GQVYAGNYPP FKDRISWAGD LDKKDASINI ENMQFIHNGT YICDVKNPPD ENSBTAP00000003653/1-269 GQVYAGNYPP FKDRVSWAGD LDKKDASINI ENMQFIHNGT YICDVKNPPD 201 250 bmy_11460T0/1-244 IVVQPGHIRL YVVEKEILPA FPVWVVVGIV TAVVLGLTLL ITMILAVLYR ENSP00000352513/1-269 IVVQPGHIRL YVVEKENLPV FPVWVVVGIV TAVVLGLTLL ISMILAVLYR ENSTTRP00000008105/1-267 IVVQPGHIRL YVVEKEILPA FPVWVVVGIV TAVVLGLTLL ITMILAVLYR BACU004244/1-235 IVVQPGHIRL YVVEKEIVPA FPVWVVVGIV TAVVLGLTLL ITMILAVLYR ENSBTAP00000003653/1-269 IVVQPGHIRL YVVEKEILPA FPVWVVVGIV TAVVLGLTLL ITMILAVIYR 251 300 bmy_11460T0/1-244 RKNSKRDYTG CNTSENVSPV KQAPRKSPSD TEGLVKSLPS GSHQ-----V ENSP00000352513/1-269 RKNSKRDYTG CSTSESLSPV KQAPRKSPSD TEGLVKSLPS GSHQGPVIYA ENSTTRP00000008105/1-267 RKNSKRDYTG A--------- ---------- -QSYMRS--- ---------- BACU004244/1-235 RKNSKRDYTG CNTSENVSPV KQAPRKSPSD TEGLVKSLPS GSHQGPVIYA ENSBTAP00000003653/1-269 RRNSKRDYAG CNTSENVSPV KQVSRKSPSD TEGLVKSLPS GSHQGPVIYA 301 350 bmy_11460T0/1-244 MADCSSAHHA MLGSLVLCHI VGCGKEY ENSP00000352513/1-269 QLDHSGGHHS DKINKSESVV YADIRKN ENSTTRP00000008105/1-267 ---------- ---------- ------- BACU004244/1-235 QLDHSGGHHS DKINKSESVV YADIRKN ENSBTAP00000003653/1-269 QLDHSGGHHS DRINKSESVV YADIRKN