KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:46 2014 Check: 00 .. Name: ENSTTRP00000009846/1-392 Len: 848 Check: 5740 Weight: 1.00 Name: ENSP00000356015/1-397 Len: 848 Check: 8437 Weight: 1.00 Name: ENSBTAP00000003660/1-397 Len: 848 Check: 6711 Weight: 1.00 Name: bmy_19637T0/1-365 Len: 848 Check: 2110 Weight: 1.00 Name: BACU011751/1-848 Len: 848 Check: 7930 Weight: 1.00 // 1 50 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU011751/1-848 MDFNQCFQLD VLLLLTKQPC VDCPLGAKPA TSSGVERAIV LTLGSSVSPA 51 100 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU011751/1-848 EPVTQEGQWC LGVLTGRPEA THRLETGVRL SETDFKVMAR DELILRWKQY 101 150 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU011751/1-848 EAYVQALEGK YTDLNSNDVT GLRESEEKLK QQQQESARRE NILVMRLATK 151 200 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU011751/1-848 EQEMQECTTQ IQYLKQVQQP SVAQLRSTMV DPAINLFFLK MKGELEQTKD 201 250 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------- -----TRC-- --------GG RLRRGK---- BACU011751/1-848 KLEQAQNELS AWKFTPDSQT GKKLMAKCRM LIQENQELGR QLSQGRIAQL 251 300 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU011751/1-848 EAELALQKKY SEELKSSQDE LNDFIIQLDE EVEGMQSTIL VLQQQLKETR 301 350 ENSTTRP00000009846/1-392 ---------- ---------M SADSDPVVIV SAART----- ---------- ENSP00000356015/1-397 ---------- ---------M NAGSDPVVIV SAART----- ---------- ENSBTAP00000003660/1-397 ---------- ---------M SADSDPVVIV SAART----- ---------- bmy_19637T0/1-365 ---------- --APGRRSSA ALGALSIALA ---------- ---------- BACU011751/1-848 QQLAQYQQQQ SQAPGPSTSR TTSSEPVGQA EATGKDCSRL ANGPSNGSSS 351 400 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------F PS-------- ---------- ---------- BACU011751/1-848 RQRTSGSGFH REGDTAEDDF PSSPGNGNKA SNSSEERTGR GGSSYVNQLS 401 450 ENSTTRP00000009846/1-392 ---------- ---------- ---------- ---------- ---------- ENSP00000356015/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003660/1-397 ---------- ---------- ---------- ---------- ---------- bmy_19637T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU011751/1-848 AGYESVDSPT GSENSLTHHS NDTDSNHDPQ EEKTISVESA LMDERLGQRG 451 500 ENSTTRP00000009846/1-392 ---------- -------IIX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000356015/1-397 ---------- -------IIG SFNGALAAVP VQDLGSTVIK EVLKRATVAP ENSBTAP00000003660/1-397 ---------- -------IIG SFNGALSTVP VHDLGSTVIR EVLKRAAVAP bmy_19637T0/1-365 ---------- -------VLG SFNGALSTVP VYDLGSTVIR EVLKRAAVAP BACU011751/1-848 LETVQSQYSS FLELDALFAG SFNGALSTVP VYDLGSTVIR EVLKRAAVAP 501 550 ENSTTRP00000009846/1-392 XXXXXXXXXX XXXXXCGQNP VRKASVGAGI PYSVPAWSCQ MICGSGLKAV ENSP00000356015/1-397 EDVSEVIFGH VLAAGCGQNP VRQASVGAGI PYSVPAWSCQ MICGSGLKAV ENSBTAP00000003660/1-397 EEVSEVIFGH VLAAGCGQNP VRQASVGAGI PYSVPAWSCQ MICGSGLKAV bmy_19637T0/1-365 EEVSEVIFGH VLAAGCGQNP VRQASVGAGI PYSVPAWSCQ MICGSGLKAV BACU011751/1-848 EEVSEVIFGH VLAAGCGQNP VRQASVGAGI PYTVPAWSCQ MICGSGLKAV 551 600 ENSTTRP00000009846/1-392 CLAAQSIVVG DSSIVVAGGM ENMSKAPHLV HLRTGVRMGD APLADSVLCD ENSP00000356015/1-397 CLAVQSIGIG DSSIVVAGGM ENMSKAPHLA YLRTGVKIGE MPLTDSILCD ENSBTAP00000003660/1-397 CLAAQSIRIG DSSIVVAGGM ENMSKAPHLV HLRTGVKIGE TPLADSILCD bmy_19637T0/1-365 SLAAQSIVVG DASIVVAGGM ENMSKAPHLV HLRTGVRMGD TPLTDSMLCD BACU011751/1-848 CLAAQSIVVG DASIVVAGGM ENMSKAPHLV HLRTGVRMGD TPLTDSMLCD 601 650 ENSTTRP00000009846/1-392 GLIDAFHSYH MGITAENVAN KWQVSREDQD KVAVVSQNRT ESAQKAGHFD ENSP00000356015/1-397 GLTDAFHNCH MGITAENVAK KWQVSREDQD KVAVLSQNRT ENAQKAGHFD ENSBTAP00000003660/1-397 GLTDAFHNYH MGITAENVAK QWQVSREDQD KVAVLSQNRT EHAQKAGHFD bmy_19637T0/1-365 GLTDAFHNYH MGIT------ ---------- ---------- ---------- BACU011751/1-848 GLTDAFHNYH MGITAENVAN KWQVSREDQD KVAVLSQNRT ESAQKAGHFD 651 700 ENSTTRP00000009846/1-392 KEIVPVFVSS KKGLTEVKTD EFPRHGSNME AMSKLKPCFL TDGTGTVTPA ENSP00000356015/1-397 KEIVPVLVST RKGLIEVKTD EFPRHGSNIE AMSKLKPYFL TDGTGTVTPA ENSBTAP00000003660/1-397 KEIVPVFVSS KKGLTEVKTD EFPRHGSNME AVSKLKPCFL MDGTGTVTPA bmy_19637T0/1-365 ---------- --GLTEVKTD EFPRHGSNME AMSKLKPCFL TDGTGTVTPA BACU011751/1-848 KEIVPVFVSS KKGLTEVKTD EFPRHGSNME AMSKLKPCFL TDGTGTVTPA 701 750 ENSTTRP00000009846/1-392 NASGINDGAA AVVLMKKSEA DSRGLTSLAQ IVSWSQAGVE PSIMGIGPIP ENSP00000356015/1-397 NASGINDGAA AVVLMKKSEA DKRGLTPLAR IVSWSQVGVE PSIMGIGPIP ENSBTAP00000003660/1-397 NASGINDGAA AVVLMKKSEA GNRGLTPLAQ IVSWAQAGVE PSIMGIGPIP bmy_19637T0/1-365 NASGINDGAA AVVLMKKSEA DNRGLTPLAQ IVSWSQAGVE PSIMGIGPIP BACU011751/1-848 NASGINDGAA AVVLMKKSEA DNRGLTPLAK IVSWSQAGVE PSIMGIGPIP 751 800 ENSTTRP00000009846/1-392 AIKQAVAKAG WSLEDVDVFE INEAFAAVSV AIAKELGLNP EKVNTEGGAI ENSP00000356015/1-397 AIKQAVTKAG WSLEDVDIFE INEAFAAVSA AIVKELGLNP EKVNIEGGAI ENSBTAP00000003660/1-397 AIKQAVAKAG WSLEDVDVFE INEAFAALSV AIAKELGLNP EKVNTEGGAI bmy_19637T0/1-365 AIKQAVAKAG WSLEDVDVFE INEAFAAVSV AIAKELGLNP EKVNTEGGAI BACU011751/1-848 AIKQAVAKAG WSLEDVDVFE INEAFAAVSV AIAKELGLNP EKVNTEGGAI 801 850 ENSTTRP00000009846/1-392 ALGHPLGASG CRILVTLLHT MERKGGHREV AALCIGGGMG IAM----- ENSP00000356015/1-397 ALGHPLGASG CRILVTLLHT LERMGRSRGV AALCIGGGMG IAMCVQRE ENSBTAP00000003660/1-397 ALGHPLGASG CRILVTLLHT LERKGGHRGV AALCIGGGMG IAMCVQRG bmy_19637T0/1-365 ALGHPLGASG CRILVTLLHT MERKGGHRGV AALCIGGGMG IAMCVLRG BACU011751/1-848 ALGHPLGASG CRILVTLLHT MERKGGHRGV AALCIGGGMG IAMCVLRG