KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:47 2014 Check: 00 .. Name: ENSBTAP00000003661/1-192 Len: 236 Check: 3248 Weight: 1.00 Name: bmy_01586T0/1-236 Len: 236 Check: 5007 Weight: 1.00 Name: ENSP00000320508/1-192 Len: 236 Check: 3218 Weight: 1.00 Name: ENSTTRP00000009740/1-192 Len: 236 Check: 3218 Weight: 1.00 Name: BACU003318/1-192 Len: 236 Check: 3113 Weight: 1.00 // 1 50 ENSBTAP00000003661/1-192 MASKGPSAPA SPDSSSAGGP SGSSNGAGES GGQDSTFECN ICLDTAKDAV bmy_01586T0/1-236 MASKGPSASA SPENSSAGGP SGSSNGAGES GGQDSTFECN ICLDTAKDAV ENSP00000320508/1-192 MASKGPSASA SPENSSAGGP SGSSNGAGES GGQDSTFECN ICLDTAKDAV ENSTTRP00000009740/1-192 MASKGPSASA SPENSSAGGP SGSSNGAGES GGQDSTFECN ICLDTAKDAV BACU003318/1-192 MASKGPSASA SPENSSAGGP NGSSNGAGES GGQDSTFECN ICLDTAKDAV 51 100 ENSBTAP00000003661/1-192 ISLCGHLFCW PCLHQWLETR PNRQVCPVCK AGISRDKVIP LYGRGSTGQQ bmy_01586T0/1-236 ISLCGHLFCW PCLHQWLETR PNRQVCPVCK AGISRDKVIP LYGRGSTGQQ ENSP00000320508/1-192 ISLCGHLFCW PCLHQWLETR PNRQVCPVCK AGISRDKVIP LYGRGSTGQQ ENSTTRP00000009740/1-192 ISLCGHLFCW PCLHQWLETR PNRQVCPVCK AGISRDKVIP LYGRGSTGQQ BACU003318/1-192 ISLCGHLFCW PCLHQWLETR PNRQVCPVCK AGISRDKVIP LYGRGSTGQQ 101 150 ENSBTAP00000003661/1-192 DPREKTPPRP QGQRPEPENR G--------- ---------- ---------- bmy_01586T0/1-236 DPREKTPPRP QGQRPEPENR GEHKPTKCED LWDCTGVAGR EAGGPVLGFA ENSP00000320508/1-192 DPREKTPPRP QGQRPEPENR G--------- ---------- ---------- ENSTTRP00000009740/1-192 DPREKTPPRP QGQRPEPENR G--------- ---------- ---------- BACU003318/1-192 DPREKTPPRP QGQRPEPENR G--------- ---------- ---------- 151 200 ENSBTAP00000003661/1-192 ---------- -----GFQGF GFGDGGFQMS FGIGAFPFGI FATAFNINDG bmy_01586T0/1-236 LNEVVVPDET VASSWGFQGF GFGDGGFQMS FGIGAFPFGI FATAFNINDG ENSP00000320508/1-192 ---------- -----GFQGF GFGDGGFQMS FGIGAFPFGI FATAFNINDG ENSTTRP00000009740/1-192 ---------- -----GFQGF GFGDGGFQMS FGIGAFPFGI FATAFNINDG BACU003318/1-192 ---------- -----GFQGF GFGDGGFQMS FGIGAFPFGI FATAFNINDG 201 250 ENSBTAP00000003661/1-192 RPPPAVPGTP QYVDEQFLSR LFLFVALVIM FWLLIA bmy_01586T0/1-236 RPPPAVPGTP QYVDEQFLSR LFLFVALVIM FWLLIA ENSP00000320508/1-192 RPPPAVPGTP QYVDEQFLSR LFLFVALVIM FWLLIA ENSTTRP00000009740/1-192 RPPPAVPGTP QYVDEQFLSR LFLFVALVIM FWLLIA BACU003318/1-192 RPPPAVPGTP QYVDEQFLSR LFLFVALVIM FWLLIA