KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:47 2014 Check: 00 .. Name: ENSTTRP00000009856/1-407 Len: 670 Check: 8457 Weight: 1.00 Name: BACU011750/1-570 Len: 670 Check: 6550 Weight: 1.00 Name: bmy_19638T0/1-634 Len: 670 Check: 5468 Weight: 1.00 Name: ENSP00000317334/1-556 Len: 670 Check: 3963 Weight: 1.00 Name: ENSBTAP00000003662/1-556 Len: 670 Check: 3981 Weight: 1.00 // 1 50 ENSTTRP00000009856/1-407 ---------- ---------- --MAAASIAN IVKSSLGPVG LDKMLVDDIG BACU011750/1-570 MEGPLSVFGD RSTGEAIRSQ NVMAAASIAN IVKSSLGPVG LDKMLVDDIG bmy_19638T0/1-634 ---------- ---------- --MAAASIAN IVKSSLGPVG LDKMLVDDIG ENSP00000317334/1-556 MEGPLSVFGD RSTGETIRSQ NVMAAASIAN IVKSSLGPVG LDKMLVDDIG ENSBTAP00000003662/1-556 MEGPLSVFGD RSTGEAIRSQ NVMAAASIAN IVKSSLGPVG LDKMLVDDIG 51 100 ENSTTRP00000009856/1-407 DVTITNDGAT ILKLLEVEHP AARVLCELAD LQDKEVGDGT TSVVIIAAEL BACU011750/1-570 DVTITNDGAT ILKLLEVEHP AARVLCELAD LQDKEVGDGT TSVVIIAAEL bmy_19638T0/1-634 DVTITNDGAT ILKLLEVEHP AARVLCELAD LQDKEVGDGT TSVVIIAAEL ENSP00000317334/1-556 DVTITNDGAT ILKLLEVEHP AAKVLCELAD LQDKEVGDGT TSVVIIAAEL ENSBTAP00000003662/1-556 DVTITNDGAT ILKLLEVEHP AAKVLCELAD LQDKEVGDGT TSVVIIAAEL 101 150 ENSTTRP00000009856/1-407 LKNADELVKQ KIHPTSVISG YRLACKEAVR YISENLIINT DELGKDCLIN BACU011750/1-570 LKNADELVKQ KIHPTSVISG YRLACKEAVR YINENLIINT DELGKDCLIN bmy_19638T0/1-634 LKNADELVKQ KIHPTSVISG YRLACKEAVR YINENLIINT DELGKDCLIN ENSP00000317334/1-556 LKNADELVKQ KIHPTSVISG YRLACKEAVR YINENLIVNT DELGRDCLIN ENSBTAP00000003662/1-556 LKNADELVKQ KIHPTSVISG YRLACKEAVR YISENLIINT DELGRDCLIN 151 200 ENSTTRP00000009856/1-407 AAKTSMSSKI IGI------- -------SGD FFANMVVDAV LAVKYTDVRG BACU011750/1-570 AAKTSMSSKI IGMYPCAGPV KFRLFKKSGD FFANIVVDAV LAVKYTDVRG bmy_19638T0/1-634 AAKTSMSSKI IGI------- -------SGD FFANIVVDAV LAVKYTDVRG ENSP00000317334/1-556 AAKTSMSSKI IGI------- -------NGD FFANMVVDAV LAIKYTDIRG ENSBTAP00000003662/1-556 AAKTSMSSKV IGI------- -------NGD FFANLVVDAV LAIKYTDIRG 201 250 ENSTTRP00000009856/1-407 QPRYPVNSIN ILKAHGRSQM ESMLINGYAL NCVVGSQGMP KRIVNAKIAC BACU011750/1-570 QPRYPVNSIN ILKAHGRSQM ESMLINGYAL NCVVGSQGMP KRIVNAKIAC bmy_19638T0/1-634 QPRYPVNSIN ILKAHGRSQM ESMLINGYAL NCVVGSQGMP KRIVNAKIAC ENSP00000317334/1-556 QPRYPVNSVN ILKAHGRSQM ESMLISGYAL NCVVGSQGMP KRIVNAKIAC ENSBTAP00000003662/1-556 QPRYPVNSIN VLKAHGRSQM ESMLINGYAL NCVVGSQGMP KRIVNAKIAC 251 300 ENSTTRP00000009856/1-407 LDFSLQKTKM KLGVQVVITD PEKLDQIRQR ESDITKERIQ KILATGANVI BACU011750/1-570 LDFSLQKTKM KLGVQVVITD PEKLDQIRQR ESDIAKERIQ KILATGANVI bmy_19638T0/1-634 LDFSLQKTKM KLGVQVVITD PEKLDQIRQR ESDIAKERIQ KILATGANVI ENSP00000317334/1-556 LDFSLQKTKM KLGVQVVITD PEKLDQIRQR ESDITKERIQ KILATGANVI ENSBTAP00000003662/1-556 LDFSLQKTKM KLGVQVVITD PEKLDQIRQR ESDITKERIQ KILATGANVI 301 350 ENSTTRP00000009856/1-407 LTTGGIDDMC LKYFVETGAM AVRRVLKRDL KRVAKASGAT ILSTLANLEG BACU011750/1-570 LTTGGIDDMC LKYFVETGAM AVRRVLKRDL KRVAKASGAT ILSTLANLEG bmy_19638T0/1-634 LTTGGIDDMC LKYFVETGAM AVRRVLKRDL KRVAKASGAT ILSSLANLEG ENSP00000317334/1-556 LTTGGIDDMC LKYFVEAGAM AVRRVLKRDL KRIAKASGAT ILSTLANLEG ENSBTAP00000003662/1-556 LTTGGIDDMC LKYFVEAGAM AVRRVLKRDL KRIAKASGAT VLSTLANLEG 351 400 ENSTTRP00000009856/1-407 EET------- ---------- ---------- ---------- ---------- BACU011750/1-570 EET------- ---------- ---------- ---------- ---------- bmy_19638T0/1-634 EETFEASMLG QAEEVVQERI CDDELILIKK ESDIAKERIQ KILATGANVI ENSP00000317334/1-556 EET------- ---------- ---------- ---------- ---------- ENSBTAP00000003662/1-556 EET------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000009856/1-407 ---------- ---------- ---------- ---------- ---------- BACU011750/1-570 ---------- ---------- ---------- ---------- ---------- bmy_19638T0/1-634 LTTGGIDDMC LKYFVETGAM AVRRVLKRDL KRVAKASGAT ILSSLANLEG ENSP00000317334/1-556 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003662/1-556 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000009856/1-407 ---FEASMLG QAEEVVQERI CDDELILI-N TKARTSASVI LRGANDFMCD BACU011750/1-570 ---FEASMLG QAEEVVQERI CDDELILIKN TKARTSASVI LRGANDFMCD bmy_19638T0/1-634 EETFEASMLG QAEEVVQERI CDDELILIKN TKARTSASVI LRGANDFMCD ENSP00000317334/1-556 ---FEAAMLG QAEEVVQERI CDDELILIKN TKARTSASII LRGANDFMCD ENSBTAP00000003662/1-556 ---FEASMLG QAEEVVQERI CDDELILIKN TKARTSASVI LRGANDFMCD 501 550 ENSTTRP00000009856/1-407 KMERSLHDAL CVVKRVLESK SVVPGGGAVE AALSIYLEHY ATSM------ BACU011750/1-570 EMERSLHDAL CVVKRVLESK SVVPGGGAVE AALSIYLENY ATSMGSREQL bmy_19638T0/1-634 EMERSLHDAL CVVKRVLESK SVVPGGGAVE AALSIYLENY ATSMGSREQL ENSP00000317334/1-556 EMERSLHDAL CVVKRVLESK SVVPGGGAVE AALSIYLENY ATSMGSREQL ENSBTAP00000003662/1-556 EMERSLHDAL CVVKRVLESK SVVPGGGAVE AALSIYLENY ATSMGSREQL 551 600 ENSTTRP00000009856/1-407 ---------- ---------- ---------- ---------- ---------- BACU011750/1-570 AIAEFARSLL VIPNTLAVNA AQDSIDLVAK LRAFHNEAQV NPERKNLKWI bmy_19638T0/1-634 AIAEFARSLL VIPNTLAVNA AQDSIDLVAK LRAFHNEAQV NPERKNLKWI ENSP00000317334/1-556 AIAEFARSLL VIPNTLAVNA AQDSTDLVAK LRAFHNEAQV NPERKNLKWI ENSBTAP00000003662/1-556 AIAEFARSLL VIPNTLAVNA AQDSTDLVAK LRAFHNEAQV NPERKNLKWI 601 650 ENSTTRP00000009856/1-407 ---------- ---------- ---------- ---------- ---------- BACU011750/1-570 GLDLVNGKPR DNKQAGVFEP TIVKVKSLKF ATEAAITILR IDDLIKLHPE bmy_19638T0/1-634 GLDLVNGKPR DNKQAGVFEP TIVKVKSLKF ATEAAITILR IDDLIKLHPE ENSP00000317334/1-556 GLDLSNGKPR DNKQAGVFEP TIVKVKSLKF ATEAAITILR IDDLIKLHPE ENSBTAP00000003662/1-556 GLDLVNGKPR DNKQAGVFEP TIVKVKSLKF ATEAAITILR IDDLIKLHPE 651 700 ENSTTRP00000009856/1-407 ---------- ---------- BACU011750/1-570 SKDDKHGGYE DAVHSGALDD bmy_19638T0/1-634 SKDDKHGGYE DAVHSGALDD ENSP00000317334/1-556 SKDDKHGSYE DAVHSGALND ENSBTAP00000003662/1-556 SKDDKHGGYE DAVHSGALDA