KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:21:48 2014 Check: 00 ..
Name: ENSTTRP00000007646/1-465 Len: 465 Check: 8602 Weight: 1.00
Name: BACU013553/1-465 Len: 465 Check: 8559 Weight: 1.00
Name: bmy_03472T0/1-418 Len: 465 Check: 1536 Weight: 1.00
Name: ENSP00000426568/1-465 Len: 465 Check: 8236 Weight: 1.00
Name: ENSBTAP00000003668/1-465 Len: 465 Check: 8302 Weight: 1.00
//
1 50
ENSTTRP00000007646/1-465 MNVTSLFSFT SPAVKRLLGW KQGDEEEKWA EKAVDALVKK LKKKKGAMEE
BACU013553/1-465 MNVTSLFSFT SPAVKRLLGW KQGDEEEKWA EKAVDALVKK LKKKKGAMEE
bmy_03472T0/1-418 MNVTSLFSFT SPAVKRLLGW KQGDEEEKWA EKAVDALVKK LKKKKGAMEE
ENSP00000426568/1-465 MNVTSLFSFT SPAVKRLLGW KQGDEEEKWA EKAVDALVKK LKKKKGAMEE
ENSBTAP00000003668/1-465 MNVTSLFSFT SPAVKRLLGW KQGDEEEKWA EKAVDALVKK LKKKKGAMEE
51 100
ENSTTRP00000007646/1-465 LEKALSCPGQ PSNCVTIPRS LDGRLQVSHR KGLPHVIYCR VWRWPDLQSH
BACU013553/1-465 LEKALSCPGQ PSNCVTIPRS LDGRLQVSHR KGLPHVIYCR VWRWPDLQSH
bmy_03472T0/1-418 LEKALSCPGQ PSNCVTIPRS LDGRLQVSHR KGLPHVIYCR VWRWPDLQSH
ENSP00000426568/1-465 LEKALSCPGQ PSNCVTIPRS LDGRLQVSHR KGLPHVIYCR VWRWPDLQSH
ENSBTAP00000003668/1-465 LEKALSCPGQ PSNCVTIPRS LDGRLQVSHR KGLPHVIYCR VWRWPDLQSH
101 150
ENSTTRP00000007646/1-465 HELKPLECCE FPFGSKQKEV CINPYHYKRV ESPVLPPVLV PRHSEYNPQH
BACU013553/1-465 HELKPLECCE FPFGSKQKEV CINPYHYKRV ESPVLPPVLV PRHSEYNPQH
bmy_03472T0/1-418 HELKPLECCE FPFGSKQKEV CINPYHYKRV ESPVLPPVLV PRHSEYNPQH
ENSP00000426568/1-465 HELKPLECCE FPFGSKQKEV CINPYHYKRV ESPVLPPVLV PRHSEYNPQH
ENSBTAP00000003668/1-465 HELKPLECCE FPFGSKQKEV CINPYHYKRV ESPVLPPVLV PRHSEYNPQH
151 200
ENSTTRP00000007646/1-465 SLLAQFRNLG QNEPHMPLNA TFPDSFQQPS SHPFPHSPNS SYPNSPGSSS
BACU013553/1-465 SLLAQFRNLG QNEPHMPLNA TFPDSFQQPS SHPFPHSPNS SYPNSPGSSS
bmy_03472T0/1-418 SLLAQFRNLG QNEPHMPLNA TFPDSFQQPS SHPFPHSPNS SYPNSPGSSS
ENSP00000426568/1-465 SLLAQFRNLG QNEPHMPLNA TFPDSFQQPN SHPFPHSPNS SYPNSPGSSS
ENSBTAP00000003668/1-465 SLLAQFRNLG QNEPHMPLNA TFPDSFQQPN SHPFPHSPNS SYPNSPGSSS
201 250
ENSTTRP00000007646/1-465 STYPHSPTSS DPGSPFQMPA DTPPPAYLPP EDPITQDGSQ PMDTNIMAPS
BACU013553/1-465 STYPHSPTSS DPGSPFQMPA DTPPPAYLPP EDPMAQDGSQ PMDTNMMVPS
bmy_03472T0/1-418 STYPHSPTSS DPGSPFQMPA DTPPPAYLPP EDPMTQDGSQ PMDTNMMAPS
ENSP00000426568/1-465 STYPHSPTSS DPGSPFQMPA DTPPPAYLPP EDPMTQDGSQ PMDTNMMAPP
ENSBTAP00000003668/1-465 STYPHSPTSS DPGSPFQMPA DTPPPAYLPP EDPMTQDGSQ PMDTNMMAPS
251 300
ENSTTRP00000007646/1-465 LPSEVNRGDV QAVAYEEPKH WCSIVYYELN NRVGEAFHAS STSVLVDGFT
BACU013553/1-465 LPPEINRGDV QAVAYEEPKH WCSIVYYELN NRVGEAFHAS STSVLVDGFT
bmy_03472T0/1-418 LPSEINRGDV QAVAYEEPKH WCSIVYYELN NRVGEAFHAS STSVLVDGFT
ENSP00000426568/1-465 LPSEINRGDV QAVAYEEPKH WCSIVYYELN NRVGEAFHAS STSVLVDGFT
ENSBTAP00000003668/1-465 LPSEINRGDV QAVAYEEPKH WCSIVYYELN NRVGEAFHAS STSVLVDGFT
301 350
ENSTTRP00000007646/1-465 DPSNNKNRFC LGLLSNVNRN STIENTRRHI GKGVHLYYVG GEVYAECLSD
BACU013553/1-465 DPSNNKNRFC LGLLSNVNRN STIENTRRHI GKGVHLYYVG GEVYAECLSD
bmy_03472T0/1-418 DPSNNKNRFC LGLLSNVNRN STIENTRRHI GKGVHLYYVG GEVYAECLSD
ENSP00000426568/1-465 DPSNNKNRFC LGLLSNVNRN STIENTRRHI GKGVHLYYVG GEVYAECLSD
ENSBTAP00000003668/1-465 DPSNNKNRFC LGLLSNVNRN STIENTRRHI GKGVHLYYVG GEVYAECLSD
351 400
ENSTTRP00000007646/1-465 SSIFVQSRNC NYHHGFHPTT VCKIPSGCSL KIFNNQEFAQ LLAQSVNHGF
BACU013553/1-465 SSIFVQSRNC NYHHGFHPTT VCKIPSGCSL KIFNNQEFAQ LLAQSVNHGF
bmy_03472T0/1-418 SSIFVQSRNC NYHHGFHPTT VCKIPSGCSL KIFNNQEFAQ LLAQSVNHGF
ENSP00000426568/1-465 SSIFVQSRNC NYHHGFHPTT VCKIPSGCSL KIFNNQEFAQ LLAQSVNHGF
ENSBTAP00000003668/1-465 SSIFVQSRNC NYHHGFHPTT VCKIPSGCSL KIFNNQEFAQ LLAQSVNHGF
401 450
ENSTTRP00000007646/1-465 ETVYELTKMC TIRMSFVKGW GAEYHRQDVT STPCWIEIHL HGPLQWLDKV
BACU013553/1-465 ETVYELTKMC TIRMSFVKGW GAEYHRQDVT STPCWIEIHL HGPLQWLDKV
bmy_03472T0/1-418 ETVYELTKMC TIRMSFVK-- ---------- ---------- ----------
ENSP00000426568/1-465 ETVYELTKMC TIRMSFVKGW GAEYHRQDVT STPCWIEIHL HGPLQWLDKV
ENSBTAP00000003668/1-465 ETVYELTKMC TIRMSFVKGW GAEYHRQDVT STPCWIEIHL HGPLQWLDKV
451 500
ENSTTRP00000007646/1-465 LTQMGSPHNP ISSVS
BACU013553/1-465 LTQMGSPHNP ISSVS
bmy_03472T0/1-418 ---------- -----
ENSP00000426568/1-465 LTQMGSPHNP ISSVS
ENSBTAP00000003668/1-465 LTQMGSPHNP ISSVS