KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:21:56 2014 Check: 00 .. Name: ENSP00000275169/1-362 Len: 410 Check: 4460 Weight: 1.00 Name: ENSBTAP00000003720/1-365 Len: 410 Check: 7612 Weight: 1.00 Name: bmy_05575T0/1-410 Len: 410 Check: 8822 Weight: 1.00 Name: BACU014212/1-365 Len: 410 Check: 8690 Weight: 1.00 // 1 50 ENSP00000275169/1-362 ---------- ---------- ---------- ---------- ---MNASAAS ENSBTAP00000003720/1-365 ---------- ---------- ---------- ---------- ---MNASVSS bmy_05575T0/1-410 MGLLSSSGPK GNQVSAFVLG HKEGYCECGK LKVTEDWVYS PAVMNASSSS BACU014212/1-365 ---------- ---------- ---------- ---------- ---MNASSSS 51 100 ENSP00000275169/1-362 LNDSQVVVVA AEGAAAAATA AGGPDTGEWG PP-----AAA ALGAGGGANG ENSBTAP00000003720/1-365 LNGSQVVAVA AEGAAAAATA AGARDTGEWG HP--AAAAAA ALGGGGAANA bmy_05575T0/1-410 LNDSQVVAVA AEGAAAAATA AGARDTGEWG PPAAAAAAAA ALGGSGAANA BACU014212/1-365 LNDSRVVAVA AESAAAAATA AGARDTGEWG PP--AAAAAA ALGGSGAANA 101 150 ENSP00000275169/1-362 SLELSSQLSA GPPGLLLPAV NPWDVLLCVS GTVIAGENAL VVALIASTPA ENSBTAP00000003720/1-365 SLELSSQLPA GPPGLLLSAV NPWDVLLCMS GTVIAGENAL VVALIASTPA bmy_05575T0/1-410 SLELSSQLPA GPPGLLLSSV NPWDVLLCVS GTVIAGENAL VVALIASTPA BACU014212/1-365 SLELSSQLPA GPPGLLLSSV NPWDVLLCVS GTVIAGENAL VVALIASTPA 151 200 ENSP00000275169/1-362 LRTPMFVLVG SLATADLLAG CGLILHFVFQ YLVPSETVSL LTVGFLVASF ENSBTAP00000003720/1-365 LRTPMFVLVG SLATADLLAG CGLILHFVFQ YVVPSETVSL LTVGFLVTSF bmy_05575T0/1-410 LRTPMFVLVG SLATADLLAG CGLILHFVFQ YVVPSETVSL LTVGFLVASF BACU014212/1-365 LRTPMFVLVG SLATADLLAG CGLILHFVFQ YMLPSETVSL VTVGFLVASF 201 250 ENSP00000275169/1-362 AASVSSLLAI TVDRYLSLYN ALTYYSRRTL LGVHLLLAAT WTVSLGLGLL ENSBTAP00000003720/1-365 AASVSSLLAI TVDRYLSLYN ALTYYSRRTL MGVHLLLAAT WTVSLGLGLL bmy_05575T0/1-410 AASVSSLLAI TVDRYLSLYN ALTYYSRRTL LGVHLLLAAT WTVSLGLGLL BACU014212/1-365 AASVSSLLAI TVDRYLSLYN ALTYYSRRTL LGVHLLLAAT WTVSLGLGLL 251 300 ENSP00000275169/1-362 PVLGWNCLAE RAACSVVRPL ARSHVALLSA AFFMVFGIML HLYVRICQVV ENSBTAP00000003720/1-365 PVLGWNCLAE RAACSVVRPL TRSHVALLSA TFFAVFGIML HLYVRICQVV bmy_05575T0/1-410 PVLGWNCLAE RAACSVVRPL TRSHVALLSA TFFAVFGIML HLYVRICQVV BACU014212/1-365 PVLGWNCLAE RAACSVVRPL TRSHVALLSA TFFAVFGIML HLYVRICQVV 301 350 ENSP00000275169/1-362 WRHAHQIALQ QHCLAPPHLA ATRKGVGTLA VVLGTFGASW LPFAIYCVVG ENSBTAP00000003720/1-365 WRHAHQIALQ QHCLAPPHLA ATKKGVGTLA VVLGTFGASW LPFAIYCVVG bmy_05575T0/1-410 WRHAHQIALQ QHCLAPPHLA ATRKGVGTLA VVLGTFGASW LPFAIYCVVG BACU014212/1-365 WRHAHQIALQ QHCLAPPHLA ATRKGVGTLA VVLGTFGASW LPFAIYCVVG 351 400 ENSP00000275169/1-362 SHEDPAVYTY ATLLPATYNS MINPIIYAFR NQEIQRALWL LLCGCFQSKV ENSBTAP00000003720/1-365 SHEDPDVYTY ATLLPATYNS MINPIIYAFR NQEIQRALWL LFCGCFQSKV bmy_05575T0/1-410 SHEDPAVYTY ATLLPATYNS MINPIIYAFR NQEIQRALWL LFCGCFQSKV BACU014212/1-365 SHEDPAVYTY ATLLPATYNS MINPIIYAFR NQEIQRALWL LFCGCFQSKV 401 450 ENSP00000275169/1-362 PFRSRSPSEV ENSBTAP00000003720/1-365 PFRSRSPSEV bmy_05575T0/1-410 PFRSRSPSEV BACU014212/1-365 PFRSRSPSEV