KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:58 2014 Check: 00 .. Name: ENSTTRP00000001470/1-337 Len: 337 Check: 1376 Weight: 1.00 Name: ENSP00000263579/1-337 Len: 337 Check: 6224 Weight: 1.00 Name: ENSBTAP00000003732/1-337 Len: 337 Check: 7887 Weight: 1.00 Name: bmy_16810T0/1-230 Len: 337 Check: 6816 Weight: 1.00 Name: BACU010184/1-337 Len: 337 Check: 6711 Weight: 1.00 // 1 50 ENSTTRP00000001470/1-337 MADTAPQPNK RKREVDAEEA EALGTEGKEA GVGNGTSAPV RLPFSGFRVK ENSP00000263579/1-337 MADAAPQLGK RKRELDVEEA HAASTEEKEA GVGNGTCAPV RLPFSGFRLQ ENSBTAP00000003732/1-337 MAELAHQQSK RKRELDAEEA EASSTEGEEA GVGNGTSAPV RLPFSGFRVK bmy_16810T0/1-230 MTSLGRSRQQ RWKA------ ---------- GL-------- ---------- BACU010184/1-337 MADTAPQPNK RKRELDAEEA EAPSTEGKEA GVGNGTSTPV RLPFSGFRVK 51 100 ENSTTRP00000001470/1-337 KVLRESARDK IIFLHGKVNE ASGDGDGEDA IVILEKTPFQ VDHVAQLLKG ENSP00000263579/1-337 KVLRESARDK IIFLHGKVNE ASGDGDGEDA VVILEKTPFQ VEQVAQLLTG ENSBTAP00000003732/1-337 KVLRESARDK IIFLHGKVNE ASGDGDGEDA VVILEKTPFQ VDQVAQLLKG bmy_16810T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU010184/1-337 KVLRESARDK IIFLHGKVNE ASGDGDGEDA IVILEKTPFQ VDHVAQLLKG 101 150 ENSTTRP00000001470/1-337 SPELQLQFSN DIYSTYHLFP PRQLSXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263579/1-337 SPELQLQFSN DIYSTYHLFP PRQLNDVKTT VVYPATEKHL QKYLRQDLRL ENSBTAP00000003732/1-337 SPELQLQFSN DVYSTYHLFP PRQLSDVKTT VVYPATEKHL QKYLRQDLHL bmy_16810T0/1-230 ---------- ---------- ---FEHVKTT VVYPATEKHL QKYLHRDLRL BACU010184/1-337 SPELQLQFSN DIYSTYHLFP PRQLSDVKTT VVYPATEKHL QKYLHRDLRL 151 200 ENSTTRP00000001470/1-337 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263579/1-337 IRETGDDYRN ITLPHLESQS LSIQWVYNIL DKKAEADRIV FENPDPSDGF ENSBTAP00000003732/1-337 VRETGSDYRN VTLPHLESQS LSIQWVYNIL DKKAEADRIV FENPDPSDGF bmy_16810T0/1-230 VRETGDDYKN VTLPHLESQS LSIQWVYNIL DRKAEAERIV FENPDPSDGF BACU010184/1-337 VRETGDDYRN VTLPHLESQS LSVQWVYNIL DRKAEAERIV FENPDPSDGF 201 250 ENSTTRP00000001470/1-337 XXXXXXXXXX XXLDDLYLIA ICHRRDIKSL RDLTPEHLPL LRNILQEGQE ENSP00000263579/1-337 VLIPDLKWNQ QQLDDLYLIA ICHRRGIRSL RDLTPEHLPL LRNILHQGQE ENSBTAP00000003732/1-337 VLIPDLKWNQ QQLDDLYLIA ICHRRGIKSL RDLTAEHLPL LRNILREGQE bmy_16810T0/1-230 VLIPDLKWNQ QQLDDLYLIA ICHRRDIKSL RDLTPEHLPL LRNILQEGQE BACU010184/1-337 VLIPDLKWNQ QQLDDLYLIA ICHRRDIKSL RDLTPEHLPL LRNILQEGQE 251 300 ENSTTRP00000001470/1-337 AILQRYQVAG DRLRVYLHYL PSYYHLHVHF TALGFEAPGA GVERAHLLAE ENSP00000263579/1-337 AILQRYRMKG DHLRVYLHYL PSYYHLHVHF TALGFEAPGS GVERAHLLAE ENSBTAP00000003732/1-337 AILRRYRVAA DRLRVYLHYL PSYYHLHVHF TALGFEAPGA GVERAHLLAE bmy_16810T0/1-230 AILQRYQVAG DRLRVYLHYL PSYYHLHVHF TALGFEAPGA GVERAHLLAE BACU010184/1-337 AILQRYQVAG DRLRVYLHYL PSYYHLHVHF TALGFEAPGA GVERAHLLAE 301 350 ENSTTRP00000001470/1-337 VIENLEQDPE HYGRRTLTFA LRADDPLLAL LQEAQRS ENSP00000263579/1-337 VIENLECDPR HYQQRTLTFA LRADDPLLKL LQEAQQS ENSBTAP00000003732/1-337 VIDNLEQDPE HYRRRTLTFA LRADDPLLAL LQEAQRS bmy_16810T0/1-230 VIENLEQDPE HYGRRTLTFA LRADDPLLAL LQEAQRS BACU010184/1-337 VIENLEQDPE HYGRRTLTFA LRADDPLLAL LQEAQRS