KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:02 2014 Check: 00 .. Name: ENSP00000362728/1-536 Len: 543 Check: 4007 Weight: 1.00 Name: bmy_14983T0/1-485 Len: 543 Check: 7072 Weight: 1.00 Name: BACU003299/1-491 Len: 543 Check: 6020 Weight: 1.00 Name: ENSTTRP00000009176/1-535 Len: 543 Check: 1767 Weight: 1.00 Name: ENSBTAP00000003764/1-535 Len: 543 Check: 1114 Weight: 1.00 // 1 50 ENSP00000362728/1-536 -------MET MASPGKDNYR MKSYKNNALN PEEMRRRREE EGIQLRKQKR bmy_14983T0/1-485 MFVSSLLPET MASPGKDNYR MKSYKNNALN PEEMRRRREE EGIQLRKQKR BACU003299/1-491 ---------- MASPGKDNYR MKSYKNNALN PEEMRRRREE EGIQLRKQKR ENSTTRP00000009176/1-535 -------MET MASPGKDNYR MKSYKNNALN PEEMRRRREE EGIQLRKQKR ENSBTAP00000003764/1-535 --------ET MASPGKDNYR MKSYKNNALN PEEMRRRREE EGIQLRKQKR 51 100 ENSP00000362728/1-536 EQQLFKRRNV ELINEEAAMF DSLLMDSYVS STTGESVITR EMVEMLFSDD bmy_14983T0/1-485 EQQLFKRRNV ELINEEAAMF DSLLMDSYVS STTGESVITR EMVEMLFSDD BACU003299/1-491 EQQLFKRRNV ELINEEAAMF DSLLMDSYVS STTGESVITR EMVEMLFSDD ENSTTRP00000009176/1-535 EQQLFKRRNV ELINEEAAMF DSLLMDSYVS STTGESVITR EMVEMLFSDD ENSBTAP00000003764/1-535 EQQLFKRRNV ELINEEAAMF DSLLMDSYVS STTGESVITR EMVEMLFSDD 101 150 ENSP00000362728/1-536 SDLQLATTQK FRKLLSKEPS PPIDEVINTP RVVDRFVEFL KRNENCTLQF bmy_14983T0/1-485 SDLH------ ---------- PPIDEVINTP GVVDRFVEFL KRNENCTLQF BACU003299/1-491 SDLQLATTQK FRKLLSKEPS PPIDEVINTP GVVDRFVEFL KRNENCTLQF ENSTTRP00000009176/1-535 SDLQLATTQK FRKLLSKEPS PPIDEVINTP GVVDRFVEFL KRNENCTLQF ENSBTAP00000003764/1-535 PDLQLATTQK FRKLLSKEPS PPIDEVINTP GVVDRFVEFL KRNENCTLQF 151 200 ENSP00000362728/1-536 EAAWALTNIA SGTSQQTKIV IEAGAVPIFI ELLNSDFEDV QEQAVWALGN bmy_14983T0/1-485 EAAWALTNIA SGTSQQTKIV IEAGAVPIFI ELLNSDFEDV QEQAVWALGN BACU003299/1-491 EAAWALTNIA SGTSQQTKIV IEAGAVPIFI ELLNSDFEDV QEQAVWALGN ENSTTRP00000009176/1-535 EAAWALTNIA SGTSQQTKIV IEAGAVPIFI ELLNSDFEDV QEQAVWALGN ENSBTAP00000003764/1-535 EAAWALTNIA SGTSQQTKIV IEAGAVPIFI ELLNSDFEDV QEQAVWALGN 201 250 ENSP00000362728/1-536 IAGDSSVCRD YVLNCSILNP LLTLLTKSTR LTMTRNAVWA LSNLCRGKNP bmy_14983T0/1-485 IAGDSSVCRD YVLNCSILNP LLTLLTKSTR LTMTRNAVWA LSNLCRGKNP BACU003299/1-491 IAGDSSVCRD YVLNCSILNP LLTLLTKSTR LTMTRNAVWA LSNLCRGKNP ENSTTRP00000009176/1-535 IAGDSSVCRD YVLNCSILNP LLTLLTKSTR LTMTRNAVWA LSNLCRGKNP ENSBTAP00000003764/1-535 IAGDSSVCRD YVLNCSILNP LLTLLTKSTR LTMTRNAVWA LSNLCRGKNP 251 300 ENSP00000362728/1-536 PPEFAKVSPC LPVLSRLLFS SDSDLLADAC WALSYLSDGP NEKIQAVIDS bmy_14983T0/1-485 PPEFAKVSPC LPVLSRLLFS SDSDLLADAC WALSYLSDGP NEKIQAVIDS BACU003299/1-491 PPEFAKVSPC LPVLSRLLFS SDSDLLADAC WALSYLSDGP NEKIQAVIDS ENSTTRP00000009176/1-535 PPEFAKVSPC LPVLSRLLFS SDSDLLADAC WALSYLSDGP NEKIQAVIDS ENSBTAP00000003764/1-535 PPEFAKVSPC LPVLSRLLFS SDSDLLADAC WALSYLSDGP NEKIQAVIDS 301 350 ENSP00000362728/1-536 GVCRRLVELL MHNDYKVASP ALRAVGNIVT GDDIQTQVIL NCSALPCLLH bmy_14983T0/1-485 GVCRRLVELL MHNDNKVASP ALRAVGNIVT GDDIQT---- ---------- BACU003299/1-491 GVCRRLVELL MHNDNKVASP ALRAVGNIVT GDDIQT---- ---------- ENSTTRP00000009176/1-535 GVCRRLVELL MHNDNKVASP ALRAVGNIVT GDDIQTQVIL NCSALPCLLH ENSBTAP00000003764/1-535 GVCRRLVELL MHNDNKVASP ALRAVGNIVT GDDIQTQVIL NCSALPCLLH 351 400 ENSP00000362728/1-536 LLSSPKESIR KEACWTISNI TAGNRAQIQA VIDANIFPVL IEILQKAEFR bmy_14983T0/1-485 ---------- ---------- --------QA VIDANIFPVL IEILQKAEFR BACU003299/1-491 ---------- ---------- --------QA VIDANIFPVL IEILQKAEFR ENSTTRP00000009176/1-535 LLSSSKESIR KEACWTISNI TAGNRAQIQA VIDANIFPVL IEILQKAEFR ENSBTAP00000003764/1-535 LLSSSKESIR KEACWTISNI TAGNRAQIQA VIDANIFPVL IEILQKAEFR 401 450 ENSP00000362728/1-536 TRKEAAWAIT NATSGGTPEQ IRYLVSLGCI KPLCDLLTVM DSKIVQVALN bmy_14983T0/1-485 TRKEAAWAIT NATSGGTPEQ IRYLVSLGCI KPLCDLLTVM DSKIVQVALN BACU003299/1-491 TRKEAAWAIT NATSGGTPEQ IRYLVSLGCI KPLCDLLTVM DSKIVQVALN ENSTTRP00000009176/1-535 TRKEAAWAIT NATSGGT-EQ IRYLVSLGCI KPLCDLLTVM DSKIVQVALN ENSBTAP00000003764/1-535 TRKEAAWAIT NATSGGTPEQ IRYLVSLGCI KPLCDLLTVM DSKIVQVALN 451 500 ENSP00000362728/1-536 GLENILRLGE QEGKRSGSGV NPYCGLIEEA YGLDKIEFLQ SHENQEIYQK bmy_14983T0/1-485 GLENILRLGE QEGKRSGSGV NPYCGLIEEA YGLDKIEFLQ SHENQEIYQK BACU003299/1-491 GLENILRLGE QEGKRSGSGV NPYCGLIEEA YGLDKIEFLQ SHENQEIYQK ENSTTRP00000009176/1-535 GLENILRLGE QEGKRSGSGV NPYCGLIEEA YGLDKIEFLQ SHENQEIYQK ENSBTAP00000003764/1-535 GLENILRLGE QEGKRSGSGV NPYCGLIEEA YGLDKIEFLQ SHENQEIYQK 501 550 ENSP00000362728/1-536 AFDLIEHYFG VEDDDSSLAP QVDETQQQFI FQQPEAPMEG FQL bmy_14983T0/1-485 AFDLIEHYFG VEDDDSSLAP QVDETQQQFI FQQPEAPMEG FQL BACU003299/1-491 AFDLIEHYFG VEDDDSSLAP QVDETQQQFI FQQPEAPMEG FQL ENSTTRP00000009176/1-535 AFDLIEHYFG VEDDDSSLAP QVDETQQQFI FQQPEAPMEG FQL ENSBTAP00000003764/1-535 AFDLIEHYFG VEDDDSSLAP QVDETQQQFI FQQPEAPMEG FQL