KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:05 2014 Check: 00 .. Name: ENSBTAP00000003785/1-443 Len: 443 Check: 3177 Weight: 1.00 Name: ENSP00000229955/1-419 Len: 443 Check: 4235 Weight: 1.00 Name: ENSTTRP00000005514/1-419 Len: 443 Check: 3673 Weight: 1.00 Name: bmy_09370T0/1-419 Len: 443 Check: 3400 Weight: 1.00 Name: BACU002839/1-393 Len: 443 Check: 8221 Weight: 1.00 // 1 50 ENSBTAP00000003785/1-443 CCSVLKCLKN THISDNSSFH PVETMVVSAV LTASHTGASN TTFVVYENTY ENSP00000229955/1-419 ---------- ---------- ----MVFSAV LTAFHTGTSN TTFVVYENTY ENSTTRP00000005514/1-419 ---------- ---------- ----MVFSAV LTASHTGASN TTFVVYENTN bmy_09370T0/1-419 ---------- ---------- ----MVFSAV LTASHTGASN TTFVVYENAN BACU002839/1-393 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000003785/1-443 MNITVPPPFQ YPGVGPLLRY SVESLAPTGM SSLTVNSTAV SPTPAASKSL ENSP00000229955/1-419 MNITLPPPFQ HPDLSPLLRY SFETMAPTGL SSLTVNSTAV PTTPAAFKSL ENSTTRP00000005514/1-419 MNITVPPPFQ HPDMGSLLRY SFETMAPTGM SSLTLNSTAV PPTPAVLKSL bmy_09370T0/1-419 MNITVPPPFQ HPDIGPLLRY SSETMAPTGM SSLTLNSTAV PPTPAVLKSL BACU002839/1-393 MNITVPPPFQ HPDIGPLLRY SSETMAPTGM SSLTLNSTAV PPTPAVLKSL 101 150 ENSBTAP00000003785/1-443 NLPLQIILSA LMMFILCVSF LGNLVVCLMV YQKAAMRSAI NILLASLAFA ENSP00000229955/1-419 NLPLQITLSA IMIFILFVSF LGNLVVCLMV YQKAAMRSAI NILLASLAFA ENSTTRP00000005514/1-419 NLPLQIILSA IMIFILFVSF LGNLVVCLMV YQKAAMRSAI NILLASLAFA bmy_09370T0/1-419 NLPLQIILSA IMIFILFVSF LGNLVVCLMV YQKAAMRSAI NILLASLAFA BACU002839/1-393 NLPLQIMLSA IMIFILFVSF LGNLVVCLMV YQKAAMRSAI NILLASLAFA 151 200 ENSBTAP00000003785/1-443 DMLLAVLNMP LALVTILTTR WIFGKFFCRV SAMFFWLFVI EGVAILLIIS ENSP00000229955/1-419 DMLLAVLNMP FALVTILTTR WIFGKFFCRV SAMFFWLFVI EGVAILLIIS ENSTTRP00000005514/1-419 DMLLAVLNMP FALVTILTTR WIFGKFFCRV SAMFFWLFVI EGVAILLIIS bmy_09370T0/1-419 DMLLAVLNMP FALVTILTTR WIFGKFFCRV SAMFFWLFVI EGVAILLIIS BACU002839/1-393 DMLLAVLNMP FALVTILTTR WIFGKFFCRV SAMFFWLFVI EGVAILLIIS 201 250 ENSBTAP00000003785/1-443 IDRFLIIVQR QDKLNPYRAK VLIAVSWATS FCVAFPLAVG NPDLQIPSRA ENSP00000229955/1-419 IDRFLIIVQR QDKLNPYRAK VLIAVSWATS FCVAFPLAVG NPDLQIPSRA ENSTTRP00000005514/1-419 IDRFLIIVQR QDKLNPYRAK VLIAVSWATS FCVAFPLAVG NPDLQIPSRA bmy_09370T0/1-419 IDRFLIIVQR QDKLNPYRAK VLIAVSWATS FCVAFPLAVG NPDLQIPSRA BACU002839/1-393 IDRFLIIVQR QDKLNPYRAK VLIAVSWATS FCVAFPLAVG NPDLQIPSRA 251 300 ENSBTAP00000003785/1-443 PQCVFGYTTD PGYQAYVILI SLISFFLPFL VILYSFMGIL NTLRHNALRI ENSP00000229955/1-419 PQCVFGYTTN PGYQAYVILI SLISFFIPFL VILYSFMGIL NTLRHNALRI ENSTTRP00000005514/1-419 PQCVFGYTTN PGYQAYVILI SLISFFLPFL VILYSFMGIL NTLRHNALRI bmy_09370T0/1-419 PQCVFGYTTN PGYQAYVILI SLISFFLPFL VILYSFMGIL NTLRHNALRI BACU002839/1-393 PQCVFGYTTN PGYQAYVILI SLISFFLPFL VILYSFMGIL NTLRHNALRI 301 350 ENSBTAP00000003785/1-443 HSYPEGICLS QASKLGLMSL QRPFQMSIDM GFKTRAFTTI LILFAVFIIC ENSP00000229955/1-419 HSYPEGICLS QASKLGLMSL QRPFQMSIDM GFKTRAFTTI LILFAVFIVC ENSTTRP00000005514/1-419 HSYPEGICLS QASKLGLMSL QRPFQMSIDM GFKTRAFTTI LILFAVFIFC bmy_09370T0/1-419 HSYPEGICLS QASKLGLMSL QRPFQMSIDM GFKTRAFTTI LILFAVFICC BACU002839/1-393 HSYPEGICLS QASKLGLMSL QRPFQMSIDM GFKTRAFTTI LILFAVFICC 351 400 ENSBTAP00000003785/1-443 WAPFTTYSLV ATFSKHFYYQ HNFFEISTWL LWLCYLKSAL NPLIYYWRIK ENSP00000229955/1-419 WAPFTTYSLV ATFSKHFYYQ HNFFEISTWL LWLCYLKSAL NPLIYYWRIK ENSTTRP00000005514/1-419 WAPFTTYSLV ATFSKHFYYQ HNFFEISTWL LWLCYLKSAL NPLIYYWRIK bmy_09370T0/1-419 WAPFTTYSLV ATFSKHFYYQ HNFFEISTWL LWLCYLKSAL NPLIYYWRIK BACU002839/1-393 WAPFTTYSLV ATFSKHFYYQ HNFFEISTWL LWLCYLKSAL NPLIYYWRIK 401 450 ENSBTAP00000003785/1-443 KFHDACLDMM PKSFKILPRL PGHTRRRIRP SAVYVCGEHR TVV ENSP00000229955/1-419 KFHDACLDMM PKSFKFLPQL PGHTKRRIRP SAVYVCGEHR TVV ENSTTRP00000005514/1-419 KFHDACLDMM PKSLKFLPRL PGHTRRRIRP SAVYVCGEHR TVV bmy_09370T0/1-419 KFHDACLDMM PKSLKFLPRL PGHTRRRIRP SAVYVCGEHR TVV BACU002839/1-393 KFHDACLDMM PKSVKFLPRL PGHTRRRVRP SAVYVCGEHR TVV