KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:06 2014 Check: 00 .. Name: ENSP00000287878/1-569 Len: 630 Check: 8639 Weight: 1.00 Name: ENSBTAP00000003789/1-330 Len: 630 Check: 4776 Weight: 1.00 Name: bmy_12918T0/1-351 Len: 630 Check: 3405 Weight: 1.00 Name: BACU000726/1-566 Len: 630 Check: 7213 Weight: 1.00 Name: ENSTTRP00000016170/1-568 Len: 630 Check: 9533 Weight: 1.00 // 1 50 ENSP00000287878/1-569 MGSAVMDTKK KKDVSSPGGS GGKKNASQKR RSLRVHIPDL SSFAMPLLDG ENSBTAP00000003789/1-330 ---------- ---------- ---------- ------ITDT S--------- bmy_12918T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU000726/1-566 MGSAAMDTKK KKDVSSPGGS SGKKNSSQKR RSLRVHIPDL SSFAMPLLDG ENSTTRP00000016170/1-568 MGSAAMDTKK KKDVSSPGGS SGKKNSSQKR RSLRVHIPDV SSFAMPLLDG 51 100 ENSP00000287878/1-569 DLEGSGKHSS RKVDSPFGPG SPSKGFFSRG PQPRPSSPMS APVRPKTSPG ENSBTAP00000003789/1-330 ---------- ---------- ---------- ---------- ---------- bmy_12918T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU000726/1-566 DLESSEKHPS RKVDSPFGSG SPSKGFFSRG PQHRPSSPVS APVRPKTSPG ENSTTRP00000016170/1-568 DLESSEKHPS RKVDSPFGSG SPSKGFFSRG PQHRPSSPVS APVRPKTSPG 101 150 ENSP00000287878/1-569 SPKTVFPFSY QESPPRSPRR MSFSGIFRSS SKESSPNSNP ATSPGGIRFF ENSBTAP00000003789/1-330 ---LVFSFS- ---------- ---------- ---------- ---------- bmy_12918T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU000726/1-566 SPKTVFPFSY QESPPRSPRR MSFSGIFRSS SKDSSPNSNP STSPGGIRFF ENSTTRP00000016170/1-568 SPKTVFPFSY QESPPRSPRR MSFSGIFRSS SKESSPNSNP STSPGGIRFF 151 200 ENSP00000287878/1-569 SRSRKTSGLS SSPSTPTQVT KQHTFPLESY KHEPERLENR IYASSSPPDT ENSBTAP00000003789/1-330 ---------- ---------- ---------- ---------- ---------- bmy_12918T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU000726/1-566 SRSRKS--LS SSPSTPTQVA KQHTFPLESY KHEPERLENR IYASSSPPDT ENSTTRP00000016170/1-568 SRSRKTSGLS SSPSTPTQVV KQHTFPLESY KHEPERLENR IYASSSPPDT 201 250 ENSP00000287878/1-569 GQRFCPSSFQ SPTRPPLASP THYAPSKAAA LAAALGPAEA GMLEKLEFED ENSBTAP00000003789/1-330 ---------- ---------- ---------- ---------- ---------- bmy_12918T0/1-351 ---------- ---------P T--------- ---------- ---------- BACU000726/1-566 GQRFCPSSFQ SSARPPSASP THHSPSKSAA LAAAPGPAEA GMLEKFELEE ENSTTRP00000016170/1-568 GQRFCPSSFQ SSARPPSASP THHSPSKSAT QAAAPGPAEA G-IEKLELEE 251 300 ENSP00000287878/1-569 EAVEDSESGV YMRFMRSHKC YDIVPTSSKL VVFDTTLQVK KAFFALVANG ENSBTAP00000003789/1-330 --AEDSESGV YMRFMRSHKC YDIVPTSSKL VVFDTTLQVK KAFFALVANG bmy_12918T0/1-351 --VKDSQS-- ---------- ---------- -----LIKVK KAFFALVANG BACU000726/1-566 E-AEDSESGV YMRFMRSHKC YDIVPTSSKL VVFDTTLQVK KAFFALVANG ENSTTRP00000016170/1-568 EVAEDSESGV YMRFMRSHKC YDIVPTSSKL VVFDTTLQVK KAFFALVANG 301 350 ENSP00000287878/1-569 VRAAPLWESK KQSFVGMLTI TDFINILHRY YKSPMVQIYE LEEHKIETWR ENSBTAP00000003789/1-330 VRAAPLWESK KQSFVGMLTI TDFINILHRY YKSPMVQIYE LEEHKIETWR bmy_12918T0/1-351 VRAAPLWESK RQSFVGMLTI TDFINILHRY YKSPMVQIYE LEEHKIETWR BACU000726/1-566 VRAAPLWESK RQSFVGMLTI TDFINILHRY YKSPMVQIYE LEEHKIETWR ENSTTRP00000016170/1-568 VRAAPLWESK RQSFVGMLTI TDFINILHRY YKSPMVQIYE LEEHKIETWR 351 400 ENSP00000287878/1-569 --ELYLQETF KPLVNISPDA ---------- ---------- ---------- ENSBTAP00000003789/1-330 DTELYLQETF KPLVNISPDA ---------- ---------- ---------- bmy_12918T0/1-351 --ELYLQETF KPLVNISPDA SHRRGWSSQQ VGWLSTEAAS GLREVRAASA BACU000726/1-566 --ELYLQETF KPLVNISPDA ---------- ---------- ---------- ENSTTRP00000016170/1-568 --ELYLQETF KPLVNISPDA ---------- ---------- ---------- 401 450 ENSP00000287878/1-569 ---------- ---------- ---------S LFDAVYSLIK NKIHRLPVID ENSBTAP00000003789/1-330 ---------- ---------- ---------S LFDAVHSLIK NKIHRLPVID bmy_12918T0/1-351 RGSGHSALCC QGHPLASRGP PNNCNGFSRS LFDAVHSLIK NKIHRLPVID BACU000726/1-566 ---------- ---------- ---------S LFDAVHSLIK NKIHRLPVID ENSTTRP00000016170/1-568 ---------- ---------- ---------S LFDAVHSLIK NKIHRLPVID 451 500 ENSP00000287878/1-569 PISGNALYIL THKRILKFLQ LFMSDMPKPA FMKQNLDELG IGTYHNIAFI ENSBTAP00000003789/1-330 PISGNALYIL THKRILKFLQ LFMSDMPKPA FMKQNLDALG IGTYHNIAFI bmy_12918T0/1-351 PISGNALYIL THKRILKFLQ LFMSDMPKPA FMKQNLGALG IGTYHNIAFI BACU000726/1-566 PISGNALYIL THKRILKFLQ LFMSDMPKPA FMKQNLGALG IGTYHNIAFI ENSTTRP00000016170/1-568 PISGNALYIL THKRILKFLQ LFMSDMPKPA FMKQNLGALG IGTYHNIAFI 501 550 ENSP00000287878/1-569 HPDTPIIKAL NIFVERRISA LPVVDESGKV VDIYSKFDVI NLAAEKTYNN ENSBTAP00000003789/1-330 HPDTPIIKAL NVFVERRVSA LPVVDESGKV VDIYSKFDVI NLAAEKTYNN bmy_12918T0/1-351 HPDTPIIKAL NVFVERRVSA LPVVDESGKV VDIYSKFDVI NLAAEKTYNN BACU000726/1-566 HPDTPIIKAL NVFVERRVSA LPVVDESGKV VDIYSKFDVI NLAAEKTYNN ENSTTRP00000016170/1-568 HPDTPIIKAL NVFVERRVSA LPVVDESGKV VDIYSKFDVI NLAAEKTYNN 551 600 ENSP00000287878/1-569 LDITVTQALQ HRSQYFEGVV KCNKLEILET IVDRIVRAEV HRLVVVNEAD ENSBTAP00000003789/1-330 LDITVTQALQ HRSQYFEGVV KCSKLEILET IVDRIVRAEV HRLVVVNEAD bmy_12918T0/1-351 LDITVTQALQ HRSQYFEGVV KCSKLEVLET IVDRIVRAEV HRLVVVNETD BACU000726/1-566 LDITVTQALQ HRSQYFEGVV KCSKLEVLET IVDRIVRAEV HRLVVVNETD ENSTTRP00000016170/1-568 LDITVTQALQ HRSQYFEGVV KCSKLEVLET IVDRIVRAEV HRLVVVNETD 601 650 ENSP00000287878/1-569 SIVGIISLSD ILQALILTPA GAKQKETETE ENSBTAP00000003789/1-330 SIVGIISLSD ILQALILTPA GAKQKQTEAE bmy_12918T0/1-351 SIVGIISLSD ILQALILTPA GAKQKETETE BACU000726/1-566 SIVGIISLSD ILQALILTPA GAKQKETETE ENSTTRP00000016170/1-568 SIVGIISLSD ILQALILTPA GAKQKETETE