KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:07 2014 Check: 00 .. Name: bmy_11249T0/1-680 Len: 720 Check: 1165 Weight: 1.00 Name: ENSBTAP00000003794/1-644 Len: 720 Check: 2589 Weight: 1.00 Name: BACU020227/1-654 Len: 720 Check: 5351 Weight: 1.00 Name: ENSTTRP00000013872/1-686 Len: 720 Check: 1477 Weight: 1.00 // 1 50 bmy_11249T0/1-680 ---------- ---------- ---------- --MAILVRLG NLDFILKLSF ENSBTAP00000003794/1-644 ---------- ---------- ---------- ---AWKKRW- ---FILRSGR BACU020227/1-654 ---------- ---------- ---------- --QAWKKRW- ---FILRSGR ENSTTRP00000013872/1-686 RGFLKRRITE TTGKVAIERE VSEELDLCYH REKAWKKRW- ---FILRSGR 51 100 bmy_11249T0/1-680 EGGDDSRSHQ REGRQWHSPP QRLALLESQS RTSGPRVGTP PGSGADTAQA ENSBTAP00000003794/1-644 MSGDPDVLEY YKNDHSKKPL RIINLNFCEQ VDAGLTFNKK ELQDSFVFDI BACU020227/1-654 MSGDPDVLEY YKNDHSKKPL RIINLNFCEQ VDAGLTFNKK ELQDSFVFDI ENSTTRP00000013872/1-686 MSGDPDVLEY YKNDHSKKPL RIINLNFCEQ VDAGLTFNKK ELQDSFVFDI 101 150 bmy_11249T0/1-680 VIGSRVQEQY GGPEPGSHS- -------PAL WEGRAGPDSL RNISSASHGP ENSBTAP00000003794/1-644 KTSERTFYLV AETEEDMNKW VQSICQICGF NQAEESTDSL RNISSAPHGP BACU020227/1-654 KTSERTFYLV AETEEDMNKW VQSICQICGF NQAEESTDSL RNISSASHGP ENSTTRP00000013872/1-686 KTSERTFYLV AETEEDMNKW VQSICQICGF NQAEESTDSL RNISSASHGP 151 200 bmy_11249T0/1-680 RSSPAELSSS NQHLLRERKS SAPSHSSQPT LFTFEPPVSN HVQPALSTSA ENSBTAP00000003794/1-644 RSSPAELSSS SQHLLRERKA SAPSHSSQPT LFTFEPALSN HVQPALSASA BACU020227/1-654 RSSPAELSSS NQHLLRERKS SAPSHSSQPT LFTFEPPVSN HVQPALSTSA ENSTTRP00000013872/1-686 RSSPAELSSS NQHLLRERKS SAPSHSSQPT LFTFEPSVSN HVQPALSTSA 201 250 bmy_11249T0/1-680 PQEYLYLHQC ISRRAENARK DPFGMSQIQK DGPNDLLGLP VTGKHSRERS ENSBTAP00000003794/1-644 PQEYLYLHQC ISRRAEST-- ---------- ---------- --------RS BACU020227/1-654 PQEYLYLHQC ISRRAENA-- ---------- ---------- --------RS ENSTTRP00000013872/1-686 PQEYLYLHQC ISRRAENA-- ---------- ---------- --------RS 251 300 bmy_11249T0/1-680 ASFSQGTRAS FLMRSDTAVQ KLAQGNGHCV NGVSGQVHGF YSLPKPSRHN ENSBTAP00000003794/1-644 ASFSQGSRAS FLMRSDTAVQ KLAQGNGHCV NGVGGQVHGF YSLPKPSRHN BACU020227/1-654 ASFSQGTRAS FLMRSDTAVQ KLAQGNGHCV NGVSGQVHGF YSLPKPSRHN ENSTTRP00000013872/1-686 ASFSQGTRAS FLMRSDTAVQ KLAQGNGHCV NGVSGQVHGF YSLPKPSRHN 301 350 bmy_11249T0/1-680 TEFRDSTYDL PRSLASHGHT KGSLTGSETD NEDVYTFKMP SNTLCREFGD ENSBTAP00000003794/1-644 TEFRDSAYDL PRSLAAHGHT KGSLTGSETD NEDVYTFKTP SSTLCREFGD BACU020227/1-654 TEFRDSTYDL PRSLASHGHT KGSLTGSETD NEDVYTFKMP SNTLCREFGD ENSTTRP00000013872/1-686 TEFRDSTYDL PRSLASHGHT KGSLTGSETD HEDVYTFKTP SNTLCREFGD 351 400 bmy_11249T0/1-680 LLVDNMDVPA TPLSAYQIPR TFTLDKNHNT MAVAAPGDSA VAPPPRPPKP ENSBTAP00000003794/1-644 LLVDNVDVPT TPLSAYQIPR TFTLDKNHNA MAVATPGDSA IAPPPRPPKP BACU020227/1-654 LLVDNMDVPA TPLSAYQIPR TFTLDKNHNT MAVAAPGDSA VAPPPRPPKP ENSTTRP00000013872/1-686 LLVDNMDVPA TPLSAYQIPR TFTLDRNHNT MAVATPGDSA AAPPPRPPKP 401 450 bmy_11249T0/1-680 SQAETPRWGS PQQRPPVGDS SRSASAAATI PRRNTLPAMD NSRLHRASSC ENSBTAP00000003794/1-644 SQADTPRWGS PQQRPPTGEG SRSVSAAATI PRRNTLPAMD NSRLHRASSC BACU020227/1-654 SQAETPRWGS PQQRPPVSDS SRSASAAATI PRRNTLPAMD NSRLHRASSC ENSTTRP00000013872/1-686 SQAETPRWGS PQQRPPAGDS SRSASAAATI PRRNTLPAMD NSRLHRASSC 451 500 bmy_11249T0/1-680 ESYDYPQRGG DNAGRSTESM SDAVSAFLPG KTVVGRSDST NSEDNYVPMN ENSBTAP00000003794/1-644 ESYDYPQRGG DSAGRSAES- --------PA KAVVGRSDST NSEDNYVPMN BACU020227/1-654 ESYDYPQRGG DSAGRSTEST SDAVSAFLPG KTVVGRSDST NSEDNYVPMN ENSTTRP00000013872/1-686 ESYDYPQRGG DNAGRSTESV SDAVSAFLPG KTVVGRSDST NSEDNYVPMN 501 550 bmy_11249T0/1-680 PGSSTLLALE RAGDNSQSVY IPMSPGPHHF DPLGYPTSAL PMHRGSSRGS ENSBTAP00000003794/1-644 PGSSTLLALE RAGDNSQSVY IPMSPGPHHF DPLGYPSSAL SLHRGSSRGS BACU020227/1-654 PGSSTLLALE RAGDNSQSVY IPMSPGPHHF DPLGYPTSAL PMHRGSSRGS ENSTTRP00000013872/1-686 PGSSTLLALE RAGDNSQSVY IPMSPGPHHF DPLGYPTSAL PMHRGSSRAS 551 600 bmy_11249T0/1-680 EIQPPPVNRN LKPDRKAKPT PLDLRNNTVI DELPFKSPIT KSWSRAIHSF ENSBTAP00000003794/1-644 EIQPPPVNRN LKPDRKAKPT PLDLRNNTVI DELPFKSPIT RSWSRAIHSF BACU020227/1-654 EIQPPPVNRN LKPDRKAKPT PLDLRNNTVI DELPFKSPIT KSWSRAIHSF ENSTTRP00000013872/1-686 EIQPPPVNRN LKPDRKAKPT PLDLRNNTVI DELPFKSPIT KSWSRAIHSF 601 650 bmy_11249T0/1-680 NPGSSQYCRP ISTQSITSTD SGDSEENYVP MQNPVSASPI PSGTNSPAPK ENSBTAP00000003794/1-644 SPSSSQYCRP ISTQSITSTD SGDSEENYVP MQNPVSASPI PSGTNSPAPK BACU020227/1-654 NPGSSQYCRP ISTQSITSTD SGDSEENYVP MQNPVSASPI PSGTNSPAPK ENSTTRP00000013872/1-686 NPGSTQYCRP ISTQSITSTD SGDSEENYVP MQNPVSASPI PSGTNSPAPK 651 700 bmy_11249T0/1-680 KNTGSVDYLA LDFQPSSPSP HRKPSTSSVT SDEKVDYVQV DKEKTQALQN ENSBTAP00000003794/1-644 KSTGSVDYLA LDFQPSSPSP HRKPSTSSVT SDEKVDYVQV DKEKTQALQN BACU020227/1-654 KSTGSVDYLA LDFQPSSPSP HRKPSTSSVT SDEKVDYVQV DKEKTQALQN ENSTTRP00000013872/1-686 KSTGSVDYLA LDFQPSSPSP HRKPSTSSVT SDEKVDYVQV DKEKTQALQS 701 750 bmy_11249T0/1-680 TMQEWTDVRQ SSEPSKGAKL ENSBTAP00000003794/1-644 TMQEWTDVRQ SSEPSKGAKL BACU020227/1-654 TMQEWTDVRQ SSEPSKGAKL ENSTTRP00000013872/1-686 TMQEWTDVRQ SSEPSKGPKL