KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:16 2014 Check: 00 .. Name: ENSP00000408581/1-1099 Len: 1100 Check: 3778 Weight: 1.00 Name: ENSBTAP00000003842/1-619 Len: 1100 Check: 6929 Weight: 1.00 Name: ENSTTRP00000000161/1-1067 Len: 1100 Check: 7185 Weight: 1.00 Name: bmy_14474T0/1-573 Len: 1100 Check: 3499 Weight: 1.00 Name: BACU013679/1-624 Len: 1100 Check: 2367 Weight: 1.00 // 1 50 ENSP00000408581/1-1099 MCPSEMGTLW HHWSPVLISL AALFSKVTEG RGILESIQRF SLLPTYLPVT ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 ---------- ---------- -------VAS RGILESIQRF SSLPTYLPVT bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000408581/1-1099 YHINNADVSF FLKEANQDIM RNSSLQSRVE SFLIYKSRRL PVLNASYGPF ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 YHIHHADVSF FLKEANQDVM RNSSLQSRVE SFLVYRSKRF PVLNASYGPF bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000408581/1-1099 SIEQVVPQDL MLPSNPFGFT NKFSLNWKLK AHILRDKVYL SRPKVQVLFH ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 AIEQVVPQDL MLPSSPFGFT STFSLNWKLK AHILRDKVSL SRPRVHVLFH bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000408581/1-1099 IMGRDWDDRS AGEKLPCLRV FAFRETREVR GSCRLQGDLG LCVAELELLS ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 VVGRDWDDAG PAQRLPCLRV FAFRETREVR GSCRLQGALG LCVAQLELPA bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000408581/1-1099 SWFSPPTVVA GRRKSVDQPE GTPVELYYTV HPGGERGDCV REDARRSNGI ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 GWFGPPTVVA GRKKSPEPPE GSPVELYYAL QPGDERGDC- ---ARRAGGM bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000408581/1-1099 RTGHSDIDES GPPLQRIGSI FLYQTHRKPS LRELRLDNSV AIHYIPKTVR ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 RTGRSDIDES GPPLQRIGSV FLHQTPSRPP LRELRLDNHV AVQYVPKTVR bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- -MYFIP---- 301 350 ENSP00000408581/1-1099 KGDVLTFPVS ISRNSTEDRF TLRAKVKKGV NIIGVRASSP SIWDVKERTD ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 QGDVLTFPVS ISKNSTEDRF TLRVKVMKGM NIIGVRASSP SVWEVKKSMD bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000408581/1-1099 YTGKYAPAVI VCQKKAAGSE NSADGASYEV MQIDVEVEEP GDLPATQLVT ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 YAGKYTPAVI VCQKKSAGSE NSAEGASYEV MQIDVEIQEA SDPPTTQLVT bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000408581/1-1099 WQVEYPGEIT SDLGVSKIYV SPKDLIGVVP LAMEAEILNT AILTGKTVAV ENSBTAP00000003842/1-619 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000161/1-1067 WQVEYPGDIT SDLGVSKIYV SQKDLIGVIP LAMEAEILNT AVLTGKTVAV bmy_14474T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU013679/1-624 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000408581/1-1099 PVKVVSVEDD GTVTELLESV ECRSSDEDVI KVSDRCDYVF VNGKEMKGKV ENSBTAP00000003842/1-619 ---------- ---------- ---------- QVSDRCDYIF VNGKEMKGKV ENSTTRP00000000161/1-1067 PVKVVSVEED GAVTD-LKSV ECRSSDEDVI KVSDRCDYVF VNGKEMKGKV bmy_14474T0/1-573 ---------- ---------- ---------- ---------- -----MKGKV BACU013679/1-624 ---------- ---------- ---------- KVSDRCDYVF VNGKEMKGKV 501 550 ENSP00000408581/1-1099 NVVVNFTYQH LSSPLEMTVW VPRLPLQIEV SDTELNQIKG WRVPIVSSRR ENSBTAP00000003842/1-619 GVVVNFTFQH LNTPLEMTVW VPRLPLQIEI SDTELNQIKG WRVPIVSNKR ENSTTRP00000000161/1-1067 NVVVNFTYQH LTSPLEMMVW VPRLPLQIEV SDTELNQIKG WRVPIVSSKR bmy_14474T0/1-573 NVVVNFTYQH LTSPLEMMV- ---------- ---------- ---------- BACU013679/1-624 NVVVNFTYQH LTSPLEMVVW APRLPLQIEV SDTELNQIKG WRVPIVSNKR 551 600 ENSP00000408581/1-1099 PAGDSEEEED DERRGRGCTL QYQHAMVRVL TQFVAEAAGP GGHLAHLLGS ENSBTAP00000003842/1-619 PAQDSEEEDE DEKRNRGCTL QYQHAMVRVL TQFVAEAAEP GGQLAHLLGS ENSTTRP00000000161/1-1067 PARDSEEEEE DEKKGRGCTL QYQHAMVRVL TQFVAEVAEP GGQLAHLLGS bmy_14474T0/1-573 PARDSEEEDE DEKKGRGCAL QYQHAMVRVL TQFVAEVAEP GGQLAHLLGS BACU013679/1-624 PARDSEEEDE DEKKGRGCAL QYQHAMVRVL TQFVAEVAEP GGQLAHLLGS 601 650 ENSP00000408581/1-1099 DWQVDITELI NDFMQVEEPR IAKLQGGQIL MGQELGMTTI QILSPLSDTI ENSBTAP00000003842/1-619 DWQVDITELV NDFMQVEEPR IAKLQGGQVL IGQELGMTTI QILSPLSDAI ENSTTRP00000000161/1-1067 DWQVDITELV NDFMQVEEPR IAKLQGGQVL IGQELGMTAI QILSPLSDAI bmy_14474T0/1-573 DWQVDITELV NDFMQVEEPR IAKLQGGQVL IGQELGMTTI QILSPLSDAI BACU013679/1-624 DWQVDITELV KDFMQVEEPR IAKLQGGQVL IGQELGMTTI QILSPLSDAI 651 700 ENSP00000408581/1-1099 LAEKTITVLD EKVTITDLGV QLVTGLSLSL QLSPGSNRAI FATAVAQELL ENSBTAP00000003842/1-619 LAEKTVTVLD EKVTITDLGV QLVTGLSLSL QLSPGSNRAI FATAVAQELL ENSTTRP00000000161/1-1067 LAEKTITVLD EKVTITDLGV QLVAGLSLSL QLSPGSNRAI FATAVAQELL bmy_14474T0/1-573 LAEKTITVLD EKVTITDLGV QLVAGLSLSL QLSPGSNRAI FATAVAQELL BACU013679/1-624 LAEKTITVLD EKVTITDLGV QLVAGLSLSL QLSPGSNRAI FATAVAQELL 701 750 ENSP00000408581/1-1099 QRPK-QEAAI SCWVQFSDGS VTPLDIYDGK DFSLMATSLD EKVVSIHQDP ENSBTAP00000003842/1-619 QRPKQQEAAI SCWVQFSDGS VTPLDIYDAK DFSLMATSLD EKVVSIHQDP ENSTTRP00000000161/1-1067 QRPR-QEAAI SCWVQFSDGS VTPLDIYDAK DFSLMATSLD EKVVSIHQDP bmy_14474T0/1-573 QRPR-QEAAI SCWVQFSDGS VTPLDIYDAK DFSLMATSLD EKVVSIHQDP BACU013679/1-624 QRPR-QEAAI SCWVQFSDGS VTPLDIYDAK DFSLMATSLD EKVVSIHQDP 751 800 ENSP00000408581/1-1099 KFKWPIIAAE TEGQGTLVKV EMVISESCQK SKRKSVLAVG TANIKVKFGQ ENSBTAP00000003842/1-619 KFKWPIIAAE AEGQGALVKV EMVICESCQK SKRKSVLAVG TANIKVKFGQ ENSTTRP00000000161/1-1067 KFKWPIITAE AEGQGALVKV EMVICESCQK SKRKSVLAVG TANVKVKFGP bmy_14474T0/1-573 KFKWPIITAE AEGQGALVKV EMVICESCQK SKRKSVLAVG TANIKVKFGQ BACU013679/1-624 KFKWPIITAE AEGQGALVKV EMVICESCQK SKRKSVLAVG TANIKVKFGQ 801 850 ENSP00000408581/1-1099 NDANPNTSDS RHTGAGVHME NNVSDRRPKK PSQEWGSQEG QYYGSSSMGL ENSBTAP00000003842/1-619 NDATPNTSDS RHTGAGGRLD NNISDRRPKK PLQEWGSQEG EYYSSSSMGL ENSTTRP00000000161/1-1067 NDANPNTSDS RRTGAGGHLD NNVSDRRPRK PSQEWGRQEG RYYGSSSVGL bmy_14474T0/1-573 NDANPNTSDS RHMGAGGHLD NNVSDRRPKK PSQEWRSQEG RYYGSSSVGL BACU013679/1-624 NDANPNTSDS RHMGAGGHLD NNVSDRRPKK PSQEWRSQEG RYYGSSSVGL 851 900 ENSP00000408581/1-1099 MEGRGTTTDR SILQKKKGQE SLLDDNSHLQ TIPSDLTSFP AQVDLPRSNG ENSBTAP00000003842/1-619 MEGRGSTTER STFQKNRGQE SLLDDGSHLQ TISIDLTSFP AQVDLPRSHG ENSTTRP00000000161/1-1067 MEGRGSTTER STFQKNRGQE SLLDDDSHLQ TISIDLTSFP AQVDLPRSYG bmy_14474T0/1-573 MEGRGSTTER STFQKNHGQE SLLDDDSHLQ TISIDLTSFP SQVDLPRSYG BACU013679/1-624 MEGRGSTTER STFQKNHGQE SLLDDDSHLQ TISIDLTSFP AQVDLPRSYG 901 950 ENSP00000408581/1-1099 EMDGNDLMQA SKGLSDLEIG MYALLGVFCL AILVFLINCV TFALKYRHKQ ENSBTAP00000003842/1-619 ETEEND-PQS SKGLSDLEIG MYALLGVFCL AILVFLINCV TFALKYRHKQ ENSTTRP00000000161/1-1067 EMDENDLTQA SKGLSDLEIG MYALLGVFCL AILVFLINCV TFALKYRHKQ bmy_14474T0/1-573 EMDENDLTQA SKGLSDLEIG MYALLGVFCL AILVFLINCV TFALKYRHKQ BACU013679/1-624 EMDENDLTQA SKGLSDLEIG MYALLGVFCL AILVFLINCV TFALKYRHKQ 951 1000 ENSP00000408581/1-1099 VPFEEQEGMS HSHDWVGLSN RTELLENHIN FASSQDEQIT AIDRGMDFEE ENSBTAP00000003842/1-619 VPFEEQEGMT HSHDWVGLSH RTELLENQLH FASSQEEQIT AIDRGMDFEE ENSTTRP00000000161/1-1067 VPFEEQEGMS HYHDWVGLSH RAELLENHIN LASSQDEQIT AIDRGMDFEE bmy_14474T0/1-573 VPFEEQEGMS HYHDWVGLSH RAELLENHIN LASSQDEQIT AIDRGMDFEE BACU013679/1-624 VPFEEQEGMS QYHDWVGLSH RAELLENHIN LASSQDEQIT AIDRGMDFEE 1001 1050 ENSP00000408581/1-1099 SKYLLSTNSQ KSINGQLFKP LGPIIIDGKD QKSEPPTSPT SKRKRVKFTT ENSBTAP00000003842/1-619 SKYLLCTDSQ KSINGQLFRS SGPTLMDGKD QKSEPPTSPT SKRKRVKFTT ENSTTRP00000000161/1-1067 SKYLLSTNSP NSTNGQLFAS SGPSLMDGSD PKSEPPTSPT SKRKRVEFTT bmy_14474T0/1-573 SKYLLSTNSQ NSINGQLFKP SGPTLMDGKD QKSEPPTSPT SKRKRVKFTT BACU013679/1-624 SKYLLSSNSQ NSINGQLFKP SGPTLMDGTD QKSEPPTSPT SKRKRVKFTT 1051 1100 ENSP00000408581/1-1099 FTAVSSDDEY PTRNSIVMSS EDDIKWVCQD LDPGDCKELH NYMERLHENV ENSBTAP00000003842/1-619 FATLSPEDGC PAVNSLAASR EDTVNWVGQD LDPGGGQESH GYREGLREDV ENSTTRP00000000161/1-1067 FTTVSTDDRC PAVNSIATSS EDAVKWVCQD LDPGGCQESC GYMEGLHEDV bmy_14474T0/1-573 FTTVSTDDRC PTVNSIATSS EDAMNWVCQD LDPGGCQESR GYMEGLHEDV BACU013679/1-624 FTTVSTDDRC PTVNSIATSS EDAMNWVCQD LDPGGCQESR SYMEGLREDV