KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:21 2014 Check: 00 .. Name: ENSTTRP00000008991/1-424 Len: 535 Check: 5917 Weight: 1.00 Name: ENSP00000405905/1-471 Len: 535 Check: 7419 Weight: 1.00 Name: bmy_13409T0/1-280 Len: 535 Check: 7610 Weight: 1.00 Name: ENSBTAP00000003873/1-532 Len: 535 Check: 3383 Weight: 1.00 // 1 50 ENSTTRP00000008991/1-424 ---------- ---------- ---------- ---------- ----ENNEDG ENSP00000405905/1-471 MAKKVAVIGA GVSGLISLKC CVDEGLEPTC FERTEDIGGV WRFKENVEDG bmy_13409T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003873/1-532 MAKKVAVIGA GVSGLASLKC CVDEGLEPTC FERTEDIGGL WRFKENVEDG 51 100 ENSTTRP00000008991/1-424 LASIYQSAIA NTSKEMSCFS DLPMP-DFPN FLHNSKFLEY FRIFVKKFDL ENSP00000405905/1-471 RASIYQSVVT NTSKEMSCFS DFPMPEDFPN FLHNSKLLEY FRIFAKKFDL bmy_13409T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003873/1-532 RASIYQSVIS NTSKEMSCFS DFPMPEDFPN FLHNSKLLEY FRIFAKKFDL 101 150 ENSTTRP00000008991/1-424 LKYIQFQTTV LSVKKRPDFS TTGQWVVVTE SNGKEQSAVF DTVMVCSGHH ENSP00000405905/1-471 LKYIQFQTTV LSVRKCPDFS SSGQWKVVTQ SNGKEQSAVF DAVMVCSGHH bmy_13409T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003873/1-532 LKYIQFQTTV LSVKKHPDFA SSGQWVVVTK NNGKEQSAVF DGVMVCSGHH 151 200 ENSTTRP00000008991/1-424 ILPHLPLESF PGIQKFKGQY LHSHQYKHPE GFERKRILVI GIGNSASDIA ENSP00000405905/1-471 ILPHIPLKSF PGMERFKGQY FHSRQYKHPD GFEGKRILVI GMGNSGSDIA bmy_13409T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003873/1-532 ILPHLPLESF PGIQKFKGQY FHSRQYKHPE GFEKKRILVI GIGNSASDIA 201 250 ENSTTRP00000008991/1-424 VELSKKAAQV FVSTRHGSWV MGRISEDGYP WDMVFHTHFS SMLRNVLPRR ENSP00000405905/1-471 VELSKNAAQV FISTRHGTWV MSRISEDGYP WDSVFHTRFR SMLRNVLPRT bmy_13409T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003873/1-532 VELCKKAAQV FISTRHGSWV ISRISEDGYP WDSVYHTRFK TQLRNAVPRI 251 300 ENSTTRP00000008991/1-424 VVKWVMEQQM NQ-FNHENYG LMPQNKYLMK -PILSDDLPS HILYGAIKVK ENSP00000405905/1-471 AVKWMIEQQM NRWFNHENYG LEPQNKYIMK EPVLNDDVPS RLLCGAIKVK bmy_13409T0/1-280 -----MEQQM NRWFNHENYG LMPQNKYLMK EPILSDDLPS RILYGAIKVK ENSBTAP00000003873/1-532 VVKWMMENGM NQWFNHENYG LIPQNKYLVK EPVVNDDLPS RILYGAIKVK 301 350 ENSTTRP00000008991/1-424 SRVKELTETS AIFEDGTVEE DIDVIVFAIG YTFSFPFLEA PLVKVENNMV ENSP00000405905/1-471 STVKELTETS AIFEDGTVEE NIDVIIFATG YSFSFPFLED SLVKVENNMV bmy_13409T0/1-280 SRVKELTETS ALFEDGTVEE DIDVIVFATG YTFSFPFLED PLVKVENNMV ENSBTAP00000003873/1-532 SRVKELTETS AIFEDGTVEE NIDIIVFATG YTVSFPFLED -LVKVENNMV 351 400 ENSTTRP00000008991/1-424 LLYKYMFPPH LEKSTLACIG LIQPLFN-FP TVELQARWVT RVFKXXXXXX ENSP00000405905/1-471 SLYKYIFPAH LDKSTLACIG LIQPLGSIFP TAELQARWVT RVFKGLCSLP bmy_13409T0/1-280 SLYKYMFPPH LEKSTLACIG LIQTLGSIFP TVELQARWVT RVFKGLCALP ENSBTAP00000003873/1-532 SLYKFMFPPQ LEKSTLACIG LIQPLGSIFP TIELQARWVT RVFKGLCTLP 401 450 ENSTTRP00000008991/1-424 XXXXXXXXXX XXXXXXXXXF GESNNQILQT SYIDYLDELA LEIGAKPDLL ENSP00000405905/1-471 SERTMMMDII KRNEKRIDLF GESQSQTLQT NYVDYLDELA LEIGAKPDFC bmy_13409T0/1-280 SERTMRADII KRNKKRIDLF GESNSQILQT SYIDYLDELA LEIGAKPDLL ENSBTAP00000003873/1-532 SERTMMEDII KRNKKRIDLF GESNSQILQT NHIEYLDELA VEIGVKPDIL 451 500 ENSTTRP00000008991/1-424 SLLLKEPKLA MKLYFGPCNS YQ-------- ---------- ---------- ENSP00000405905/1-471 SLLFKDPKLA VRLYFGPCNS Y--------- ---------- ---------- bmy_13409T0/1-280 SLLLKEPKLA VKLYFGPCNS YQYRLVGPGQ WNGARSAIFT QKQRILKPLK ENSBTAP00000003873/1-532 SLLLKDPKLA VKLYFGPCNP YQYRLVGPGQ WNGARNAIFT QKRRILKPLK 501 550 ENSTTRP00000008991/1-424 ---------- ---------- ---------- ----- ENSP00000405905/1-471 ---------- ---------- ---------- ----- bmy_13409T0/1-280 TWALKTSSNF PVSFLLKILG LLAVVVAFFF QLQWF ENSBTAP00000003873/1-532 TRAIKTSSTF PVSFLLKILG LLAIVVAFFS QLQ--