KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:21 2014 Check: 00 .. Name: ENSP00000388794/1-145 Len: 505 Check: 709 Weight: 1.00 Name: ENSBTAP00000003875/1-440 Len: 505 Check: 1595 Weight: 1.00 Name: BACU002070/1-435 Len: 505 Check: 4128 Weight: 1.00 Name: bmy_22315T0/1-399 Len: 505 Check: 6021 Weight: 1.00 Name: ENSTTRP00000013201/1-204 Len: 505 Check: 40 Weight: 1.00 // 1 50 ENSP00000388794/1-145 MSAVLLLALL GFILPLPGVQ ALLCQFGTVQ HVWKVSDLPR QWTPKNTSCD ENSBTAP00000003875/1-440 MSPALLLALL GITLALPGAR ALNCYSGGVE TIRNVSEQPF RWTTSQVNCG BACU002070/1-435 MSPALLLALL GIT--VPRVQ ALTCYWGTLV SVRNASELPL QWTTSQEHCE bmy_22315T0/1-399 MSPALLLALL GIT--VPRVQ ALTCYWGTLV SVRNSSELPL QWTASQEHCE ENSTTRP00000013201/1-204 MSPFLLLALL GIT--VPGVQ ALICYWATLM SVKNASELPL QWTASQKHCE 51 100 ENSP00000388794/1-145 SGLGCQDTLM LIESGPQVSL VLSKGCTEAK DQEPRVTEHR MGPGLSLISY ENSBTAP00000003875/1-440 EGLGCQETVL ITQNDPLLYL VLIKGCTQAA NQEARVTDHR AGPGLSIVSY BACU002070/1-435 DGWSCQEVLM LMENGPHVYV VLIKGCTQAA DHEALVTQHR VGPGLSIASY bmy_22315T0/1-399 DGWSCQEVLM LMENGPHVYV VLIKGCTQAA DHEPLITQHR AGPGLSIASY ENSTTRP00000013201/1-204 EGWSCQEVLM LMENGPYVYM VLIKGCTQAA DHEDLITQHR AGPGLSIASY 101 150 ENSP00000388794/1-145 TFVCRQEDFC NNLVNSLPLW APQPPADP-- ---------- ---------- ENSBTAP00000003875/1-440 TRVCR-ENLC NDLSTSLPLW TPLPRTVPGS VRCPVCLSGE GCLSAPEMTC BACU002070/1-435 TRVCR-ENLC NHLSTSLPLW APPLPTALGS VRCPVCLSAE SCGSAAELTC bmy_22315T0/1-399 TRVCR-ENLC NHLSTSLPLW APPPPTALGS VRCPVCLSAK SCRSAAELTC ENSTTRP00000013201/1-204 TRVCR-EDLC NHLFTSLPLW APHPPTALGS VRCPVCLSAQ SCRSAAELTC 151 200 ENSP00000388794/1-145 ---------- ---------- ---------- ---------- -MMGAAE-GP ENSBTAP00000003875/1-440 PAKSSHCYNG VLQLTAGDPP GGSSTSRLKV QGCISQAGCN LLNGTQEVGP BACU002070/1-435 PAESAHCYSG VLLLSA---- -GSLTTHLKV QGCMSQAGCN LLNGTQEIGP bmy_22315T0/1-399 PAESAHCYSG VLLLSA---- -GSLTTHLKV QGCMSQAGCN LLNGTQKIGP ENSTTRP00000013201/1-204 PAESTHCYSG HLLLRA---- -GNRSTHLRV QGCMSQAGCN LLNGTQEIGP 201 250 ENSP00000388794/1-145 FGKAEQVDS- ---------- ---------- ---------- ---------- ENSBTAP00000003875/1-440 ISLWETCIPK GALTCYRGIM LQMSPNLSQD PVDWSTTTEQ QCNPGEVCQE BACU002070/1-435 INLRETCDPK AILTCHRGNM FRTSQDLTQK PVAWPANREQ LCNLGEVCQE bmy_22315T0/1-399 INLQETCDPK AILTCHRGSM FWTSQDLTQK PVIWSANREQ LCNLGEVCQE ENSTTRP00000013201/1-204 ISLQETCDS- ---------- ---------- ---------- -----ELC-- 251 300 ENSP00000388794/1-145 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003875/1-440 TLLLIDVGPR SILLGSKGCS QVNIQGD--- FMHSRPPGVL VASYARVCSS BACU002070/1-435 TLLLIDV--- ---------- ---------- ---------- ---------- bmy_22315T0/1-399 TLLLIDVGLR SLLVGSKGCS KAGTQDSQAV SVHSGPPGVF VASFARFCSS ENSTTRP00000013201/1-204 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000388794/1-145 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003875/1-440 DYCNSAASSS VLVNALPRPA PPAPGHLQCP VCLA-LGSCS QSSNVM-CPK BACU002070/1-435 ---------- ---------A PPAPGDLQCP TCLSTFGSCT QNSDIVRCPK bmy_22315T0/1-399 DKCNSAASSS VLLNSLPHPA APAPGDLQCP TCLSIFGSCT QNSDIV---- ENSTTRP00000013201/1-204 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000388794/1-145 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003875/1-440 GTSHCYKGQI FLRGGGLTAP VDIQGCVAHP SSTLLGRRWS IGVF------ BACU002070/1-435 GTSHCYKGHI ALRGVAQKLR CQKSTFVGLE ADPVETFNWT TDKVETCDNG bmy_22315T0/1-399 ---------- ---------- ---------- -SSLLNGTQN IGVF------ ENSTTRP00000013201/1-204 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000388794/1-145 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003875/1-440 ---------- -------TVT ETREGGAEVD EPLISSGAAP GPSLAWA--V BACU002070/1-435 ALCQETVLMI KAAGTKTAIL ATKGCSSDGA PAITFIQHTP APGLVAISYS bmy_22315T0/1-399 ---------- ---------- ---SVIEDHD EAIVPDGAAP APDLAWVGGL ENSTTRP00000013201/1-204 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000388794/1-145 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003875/1-440 GLALALWCGA PSLLTLFPQD P--------- ---------- ---------- BACU002070/1-435 NYCEDSFCNN KEDLYELWRT EEIDGTLGGE RWVLREALYT LEKTGRLRCL bmy_22315T0/1-399 GLSLALWCGV PSLLIPFPRD S--------- ---------- ---------- ENSTTRP00000013201/1-204 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000388794/1-145 ----- ENSBTAP00000003875/1-440 ----- BACU002070/1-435 CSYSA bmy_22315T0/1-399 ----- ENSTTRP00000013201/1-204 -----