KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:22 2014 Check: 00 .. Name: BACU001894/1-543 Len: 608 Check: 2231 Weight: 1.00 Name: ENSBTAP00000003881/1-523 Len: 608 Check: 1159 Weight: 1.00 Name: bmy_11962T0/1-514 Len: 608 Check: 4051 Weight: 1.00 Name: ENSP00000345282/1-523 Len: 608 Check: 9867 Weight: 1.00 Name: ENSTTRP00000000824/1-411 Len: 608 Check: 7209 Weight: 1.00 // 1 50 BACU001894/1-543 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000003881/1-523 MQRAAALVRR GCCPRTLGPW GRSQSSAAAE ASAVLKVRPE RSRRERILTL bmy_11962T0/1-514 MQRAAALVRR GCYPRTLGPW GRGQSSAAAE ASAVLKVRSE RSRRDRILTL ENSP00000345282/1-523 MQRAAALVRR GCGPRTPSSW GRSQSSAAAE ASAVLKVRPE RSRRERILTL ENSTTRP00000000824/1-411 ---------- ---------- ---------- ---------- ---------- 51 100 BACU001894/1-543 --MNPQVKAV EYAVRGPIML KAGEIELELQ RGIKKPFTEV IRANIGDAQA ENSBTAP00000003881/1-523 ESMNPQVKAV EYAVRGPIVL KAGEIELELQ RGIKKPFTEV IRANIGDAQA bmy_11962T0/1-514 ESMNPQVKAV EYAVRGPIML KAGEIELELQ RGIKKPFTEV IRANIGDAQA ENSP00000345282/1-523 ESMNPQVKAV EYAVRGPIVL KAGEIELELQ RGIKKPFTEV IRANIGDAQA ENSTTRP00000000824/1-411 ---------- ---------- ---------- -GIKKPFTEV IRANIGDAQ- 101 150 BACU001894/1-543 MGQQPITFLR QVMALCTYPN LLDSPSFPED AKKRARRILQ ACGGNSLGSY ENSBTAP00000003881/1-523 MGQQPITFLR QVMALCTYPN LLDSPSFPED AKKRARRILQ ACGGNSLGSY bmy_11962T0/1-514 MGQQPITFLR QVMALCTYPN LLDSPSFPED AKKRARRILQ ACGGNSLGSY ENSP00000345282/1-523 MGQQPITFLR QVMALCTYPN LLDSPSFPED AKKRARRILQ ACGGNSLGSY ENSTTRP00000000824/1-411 MGQQPITFXX XVMALCTYPN LLDSPSFPED AKKRARRILQ ACGGNSLGSY 151 200 BACU001894/1-543 SASQGVNCIR EDAAAYITRR DGGVPADPDN IYLTTGASDG ISTILKILVS ENSBTAP00000003881/1-523 SASQGVNCIR EDVAAYITRR DGGVPADPDN IYLTTGASDG ISTILKILVS bmy_11962T0/1-514 SASQGVNCIR EDVAAYITRR DGGVPADPDN IYLTTGASDG ISTILKILVS ENSP00000345282/1-523 SASQGVNCIR EDVAAYITRR DGGVPADPDN IYLTTGASDG ISTILKILVS ENSTTRP00000000824/1-411 SASQGVNCIR EDVAAYVTRR DGGVPADPDN IYLTTGASDG ISTILKILVS 201 250 BACU001894/1-543 GGGKSRTGVM IPIPQYPLYS AVISELDAIQ VNYYLDEDNC WALNVNELRR ENSBTAP00000003881/1-523 GGGKSRTGVM IPIPQYPLYS AVISELDAIQ VNYYLDEDNC WALNVNELRR bmy_11962T0/1-514 GGGKSRTGVM IPIPQYPLYS AVISELDAIQ VNYYLDEDNC WALNVNELRR ENSP00000345282/1-523 GGGKSRTGVM IPIPQYPLYS AVISELDAIQ VNYYLDEENC WALNVNELRR ENSTTRP00000000824/1-411 GGGKSRTGVM IPIPQYPLYS AVISELDAIQ VNYYLDEDNC WALNVNELRR 251 300 BACU001894/1-543 AVREAKEHCD PKVLCIINPG NPTGQVQSRK CIEDVIHFAW EEKLFLLADE ENSBTAP00000003881/1-523 AVQQAKEHCN PKVLCIINPG NPTGQVQSRK CIEDVIHFAW EEKLFLLADE bmy_11962T0/1-514 AVREAKEHCD PKVLCIINPG NPTGL----- CFTP-----W P--------- ENSP00000345282/1-523 AVQEAKDHCD PKVLCIINPG NPTGQVQSRK CIEDVIHFAW EEKLFLLADE ENSTTRP00000000824/1-411 AVREAKEHCD PKVLCIINPG NPTGQVQSRK CIEDVIHFAW EEKLFLLADE 301 350 BACU001894/1-543 CGCFSVHSGG CSVQCGRCLV QCGRCSVQCR GCSVQCGRCL VHSGGCSVQC ENSBTAP00000003881/1-523 ---------- ---------- ---------- ---------- ---------- bmy_11962T0/1-514 ---------- ---------- ---------- ---------- ---------- ENSP00000345282/1-523 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000824/1-411 ---------- ---------- ---------- ---------- ---------- 351 400 BACU001894/1-543 GRCLVQCGRC SVQCGYRQQW WTESWVYQDN VYSPDCRFHS FKKVLYEMGP ENSBTAP00000003881/1-523 ---------- ---------- -----VYQDN VYSSDCKFHS FKKVLYEMGP bmy_11962T0/1-514 ---------- ---------- -----VYQDN VYSPDCRFHS FKKVLYEMGP ENSP00000345282/1-523 ---------- ---------- -----VYQDN VYSPDCRFHS FKKVLYEMGP ENSTTRP00000000824/1-411 ---------- ---------- -----VYQDN VYSPDCRFHS FKKVLYEMGP 401 450 BACU001894/1-543 EYSGNVELAS FHSTSKGYMG ECGYRGGYME VINLHPEIKG QLVKLLSVRL ENSBTAP00000003881/1-523 EYSSNVELAS FHSTSKGYMG ECGYRGGYME VINLHPEIKG QLVKLLSVRL bmy_11962T0/1-514 EYSSNVELAS FHSTSKGYMG ECGYRGGYME VINLHPEIKG QLVKLLSVRL ENSP00000345282/1-523 EYSSNVELAS FHSTSKGYMG ECGYRGGYME VINLHPEIKG QLVKLLSVRL ENSTTRP00000000824/1-411 EYSSNVELAS FHSTSKGYMG ECGYRGGYME VINLHPEIKG QLVKLLSVRL 451 500 BACU001894/1-543 CPPVSGQAAM DXXXXXXXX- --SFEQYSRE KESVLGNLAK KAKLTEDLFN ENSBTAP00000003881/1-523 CPPVSGQAAM DIVVNPPVPG EESFEQFSRE KESVLGNLAK KAKLTEDMFN bmy_11962T0/1-514 CPPVSGQAAM DIVVNPPVPG EESFEQFSRE KESVLGNLAK KAKLTEDLFN ENSP00000345282/1-523 CPPVSGQAAM DIVVNPPVAG EESFEQFSRE KESVLGNLAK KAKLTEDLFN ENSTTRP00000000824/1-411 CPPVSGQAAM DIVVNPPVPG EESFEQFSRE KESVLGNLAR KAKLTEDLFN 501 550 BACU001894/1-543 QVPGIHCNPL QGAMYAFPRI FIPAKAMEAA QAHKMAPDMF YCMKLLEEMG ENSBTAP00000003881/1-523 QVPGIHCNPL MGAMYAFPRI FIPVKAMEAA QAHKMAPDMF YCMKLLEETG bmy_11962T0/1-514 QVPGIHCNPL QGAMYAFPRI FIPAKAMEAA QAHKMAPDMF YCMKLLEEMG ENSP00000345282/1-523 QVPGIHCNPL QGAMYAFPRI FIPAKAVEAA QAHQMAPDMF YCMKLLEETG ENSTTRP00000000824/1-411 QVPGIHCNPL QGAMYAFPRI FIPAKAMEAA QAHKMAPDMF YCMKLLEETG 551 600 BACU001894/1-543 ICVVPGSGFG QREGTYHFRM TILPPVEKLK TVLQKVKDFH IKFLEKYA-- ENSBTAP00000003881/1-523 ICVVPGSGFG QREGTYHFRM TILPPVEKLK TVLQKVKDFH IKFLEEYA-- bmy_11962T0/1-514 ICVVPGSGFG QREGTYHFRQ TPGPLIVHGS RLLDFQQYNV LCIMGSSSSR ENSP00000345282/1-523 ICVVPGSGFG QREGTYHFRM TILPPVEKLK TVLQKVKDFH INFLEKYA-- ENSTTRP00000000824/1-411 ICVVPGSGFG QREGTYHF-- ---------- ---------- ---------- 601 650 BACU001894/1-543 -------- ENSBTAP00000003881/1-523 -------- bmy_11962T0/1-514 CASLLLKT ENSP00000345282/1-523 -------- ENSTTRP00000000824/1-411 --------