KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:23 2014 Check: 00 .. Name: bmy_02041T0/1-388 Len: 676 Check: 3736 Weight: 1.00 Name: ENSTTRP00000003305/1-539 Len: 676 Check: 8333 Weight: 1.00 Name: ENSP00000363463/1-664 Len: 676 Check: 8848 Weight: 1.00 Name: ENSBTAP00000003890/1-664 Len: 676 Check: 8392 Weight: 1.00 Name: BACU007587/1-673 Len: 676 Check: 4717 Weight: 1.00 // 1 50 bmy_02041T0/1-388 ----MSYLAT FQTQPHGRRI HQRSPYLALS TFLYLKFLVV WALVLLADFV ENSTTRP00000003305/1-539 MKRRNTECSK LRRPLKRNRI TEG---IYGS TFLYLKFLVV WALVLLADFV ENSP00000363463/1-664 MKRRNADCSK LRRPLKRNRI TEG---IYGS TFLYLKFLVV WALVLLADFV ENSBTAP00000003890/1-664 MKRRNADCSK LRRPLKRNRI TEG---IYGS TFLYLKFLVV WALVLLADFV BACU007587/1-673 MKRRNADCSK LRRPLKRNRI TEG---IYGS TFLYLKFLVV WALVLLADFV 51 100 bmy_02041T0/1-388 LEFRFEYLWP FWLFIRSVYD SFRYQGLAFS VFFVCVAFTS NIICLLFIPI ENSTTRP00000003305/1-539 LEFRFEYLWP FWLFIRSVYD SFRYQGLAFS VFFVCVAFTS NIICLLFIPI ENSP00000363463/1-664 LEFRFEYLWP FWLFIRSVYD SFRYQGLAFS VFFVCVAFTS NIICLLFIPI ENSBTAP00000003890/1-664 LEFRFEYLWP FWLFIRSVYD SFRYQGLAFS VFFVCVAFTS NIICLLFIPI BACU007587/1-673 LEFRFEYLWP FWLFIRSVYD SFRYQGLAFS VFFVCVAFTS NIICLLFIPI 101 150 bmy_02041T0/1-388 QWLFFAASTY VWVQYVWHTE RGVCLPTVSL WILFVYIEAA IRFKDLKNFH ENSTTRP00000003305/1-539 QWLFFAASTY VWVQYVWHTE RGVCLPTVSL WILFVYIEAA IRFKDLKNFH ENSP00000363463/1-664 QWLFFAASTY VWVQYVWHTE RGVCLPTVSL WILFVYIEAA IRFKDLKNFH ENSBTAP00000003890/1-664 QWLFFAASTY VWVQYVWHTE RGVCLPTVSL WILFVYIEAA IRFKDLKNFH BACU007587/1-673 QWLFFAASTY VWVQYVWHTE RGVCLPTVSL WILFVYIEAA IRFKDLKNFH 151 200 bmy_02041T0/1-388 VDLCRPFAAH CIGYPVVTLG FGFKSYVSYK MRLRKQKEVQ KENEFYMQLL ENSTTRP00000003305/1-539 VDLCRPFAAH CIGYPVVTLG FGFKSYVSYK MRLRKQKEVQ KENEFYMQLL ENSP00000363463/1-664 VDLCRPFAAH CIGYPVVTLG FGFKSYVSYK MRLRKQKEVQ KENEFYMQLL ENSBTAP00000003890/1-664 VDLCRPFAAH CIGYPVVTLG FGFKSYVSYK MRLRKQKEVQ KENEFYMQLL BACU007587/1-673 VDLCRPFAAH CIGYPVVTLG FGFKSYVSYK MRLRKQKEVQ KENEFYMQLL 201 250 bmy_02041T0/1-388 QQALPPEQQM LQKQEKEAEE AAKGLPDMDS SILIHHNGGI PANKKLSTTL ENSTTRP00000003305/1-539 QQALPAEQQM LQKQEKEAEE AAKGLPDMDS SILIHHNGGI PANKKLSTTL ENSP00000363463/1-664 QQALPPEQQM LQKQEKEAEE AAKGLPDMDS SILIHHNGGI PANKKLSTTL ENSBTAP00000003890/1-664 QQALPPEQQM LQKQEKEAEE AAKGLPDMDS SILIHHNGGI PANKKLSTTL BACU007587/1-673 QQALPPEQQM LQKQEKEAEE AAKGLPDMDS SILIHHNGGI PANKKLSTTL 251 300 bmy_02041T0/1-388 PEIEYREKGK EKDKDAKKHN LGINNNNILQ PVDSKIQEIE YMENHINSKR ENSTTRP00000003305/1-539 PEIEYREKGK EKDKDAKKHN LGINNNNILQ PVDSKIQEIE YMENHINSKR ENSP00000363463/1-664 PEIEYREKGK EKDKDAKKHN LGINNNNILQ PVDSKIQEIE YMENHINSKR ENSBTAP00000003890/1-664 PEIEYREKGK EKDKDAKKHN LGINNNNILQ PVDSKIQEIE YMENHINSKR BACU007587/1-673 PEIEYREKGK EKDKDAKKHN LGINNNNILQ PVDSKIQEIE YMENHINSKR 301 350 bmy_02041T0/1-388 LNNDLVGSTE NLLKEDSCTA SSKNYKNASG VVNSSPRSHS ATNGSIPSSS ENSTTRP00000003305/1-539 LNNDLVGSTE NLLKEDSCTA SSKNYKNASG VVNSSPRSHS ATNGSIPSSS ENSP00000363463/1-664 LNNDLVGSTE NLLKEDSCTA SSKNYKNASG VVNSSPRSHS ATNGSIPSSS ENSBTAP00000003890/1-664 LNNDLVGSTE NLLKEDSCTA SSKNYKNASG VVNSSPRSHS ATNGSIPSSS BACU007587/1-673 LNNDLVGSTE NLLKEDSCTA SSKNYKNASG VVNSSPRSHS ATNGSIPSSS 351 400 bmy_02041T0/1-388 SKNEKKQKCP SKSPSAHKDL MENCIPNNQL SKPDALVRAD N--------- ENSTTRP00000003305/1-539 SKNEKKQKCP SKSPSAHKDL MENCIPNNQL SKPDALVRLE QDIKKLKADL ENSP00000363463/1-664 SKNEKKQKCT SKSPSTHKDL MENCIPNNQL SKPDALVRLE QDIKKLKADL ENSBTAP00000003890/1-664 SKNEKKQKCT SKSPSAHKDL MENCIPNNQL SKPDALVRLE QDIKKLKADL BACU007587/1-673 SKNEKKQKCP SKSPSAHKDL MENCIPNNQL SKPDALVRLE QDIKKLKADL 401 450 bmy_02041T0/1-388 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003305/1-539 QASRQVEQEL RSQISSLSNT ERGIRSEMGQ LRQENELLQN K--------- ENSP00000363463/1-664 QASRQVEQEL RSQISSLSST ERGIRSEMGQ LRQENELLQN K--------- ENSBTAP00000003890/1-664 QASRQVEQEL RSQISSLSST ERGIRSEMGQ LRQENELLQN K--------- BACU007587/1-673 QASRQVEQEL RSQISSLSST ERGIRSEMGQ LRQENELLQN KYVHLVGLWP 451 500 bmy_02041T0/1-388 L--------- ---------- ---------- ---------- ---------- ENSTTRP00000003305/1-539 LHNAVQMKQK DKQNISQLEK KLKAEQEARS FVEKQLMEEK KRKKLEEATA ENSP00000363463/1-664 LHNAVQMKQK DKQNISQLEK KLKAEQEARS FVEKQLMEEK KRKKLEEATA ENSBTAP00000003890/1-664 LHNAVQMKQK DKQNISQLEK KLKAEQEARS FVEKQLMEEK KRKKLEEATA BACU007587/1-673 LHNAVQMKQK DKQNISQLEK KLKAEQEARS FVEKQLMEEK KRKKLEEATA 501 550 bmy_02041T0/1-388 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003305/1-539 ARAVAFAAAS RGECTETLRN RIRELEAEGK KLTMDMKVKE DQIRELELKV ENSP00000363463/1-664 ARAVAFAAAS RGECTETLRN RIRELEAEGK KLTMDMKVKE DQIRELELKV ENSBTAP00000003890/1-664 ARAVAFAAAS RGECTETLRN RIRELEAEGK KLTMDMKVKE DQIRELELKV BACU007587/1-673 ARAVAFAAAS RGECTETLRN RIRELEAEGK KLTMDMKVKE DQIRELELKV 551 600 bmy_02041T0/1-388 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003305/1-539 Q--------- ---------- ---------- ---------- ---------- ENSP00000363463/1-664 QELRKYKENE KDTEVLMSAL SAMQDKTQHL ENSLSAETRI KLDLFSALGD ENSBTAP00000003890/1-664 QELRKYKENE KDTEVLMSAL SAMQDKTQHL ENSLSAETRI KLDLFSALGD BACU007587/1-673 QELRKYKENE KDTEVLMSAL SAMQDKTQHL ENSLSAETRI KLDLFSALGD 601 650 bmy_02041T0/1-388 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003305/1-539 ---------- ---------- ---------- ---------- ---------- ENSP00000363463/1-664 AKRQLEIAQG QILQKDQEIK DLKQKIAEVM AVMPSITYSA ATSPLSPVSP ENSBTAP00000003890/1-664 AKRQLEIAQG QILQKDQEIK DLKQKIAEVM AVMPSITYSA AASPLSPVSP BACU007587/1-673 AKRQLEIAQG QILQKDQEIK DLKQKIAEVM AVMPSITYSA ATSPLSPVSP 651 700 bmy_02041T0/1-388 ---------- ---------- ------ ENSTTRP00000003305/1-539 ---------- ---------- ------ ENSP00000363463/1-664 HYSSKFVETS PSGLDPNASV YQPLKK ENSBTAP00000003890/1-664 HYSSKFVETS PSGLDPNASV YQPLKK BACU007587/1-673 HYSSKFVETS PSGLDPNASV YQPLKK