KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:23 2014 Check: 00 .. Name: ENSTTRP00000011087/1-468 Len: 471 Check: 5540 Weight: 1.00 Name: ENSP00000350949/1-420 Len: 471 Check: 9830 Weight: 1.00 Name: ENSBTAP00000003897/1-420 Len: 471 Check: 8952 Weight: 1.00 Name: BACU012728/1-449 Len: 471 Check: 2477 Weight: 1.00 Name: bmy_13388T0/1-389 Len: 471 Check: 3976 Weight: 1.00 // 1 50 ENSTTRP00000011087/1-468 MLKAVILIGG PQKGTRFRPL SFEVPKPLFP VAGVPMIQHH IEACAQVAGM ENSP00000350949/1-420 MLKAVILIGG PQKGTRFRPL SFEVPKPLFP VAGVPMIQHH IEACAQVPGM ENSBTAP00000003897/1-420 MLKAVILIGG PQKGTRFRPL SFEVPKPLFP VAGVPMIQHH IEACAQVPGM BACU012728/1-449 MLKAVILIGG PQKGTRFRPL SFEVPKPLFP VAGVPMIQHH IEACAQVPGM bmy_13388T0/1-389 MLKAVILIGG PQKGTRFRPL SFEVPKPLFP VAGVPMIQHH IEACAQVPGM 51 100 ENSTTRP00000011087/1-468 QEILLIGFYQ PDEPLTRFLE AAQQEFNLPI XXXXXXXXXX XXXXXXXXXX ENSP00000350949/1-420 QEILLIGFYQ PDEPLTQFLE AAQQEFNLPV RYLQEFAPLG TGGGLYHFRD ENSBTAP00000003897/1-420 QEILLIGFYQ PDEPLTRFLE AAQQEFNLPI RYLQEFAPLG TGGGLYHFRD BACU012728/1-449 QEILLIGFYQ PDEPLTRFLE AAQREFNLPI RYLQEFAPLG TGGGLYHFRD bmy_13388T0/1-389 QEILLIGFYQ PDEPLTRFLE AAQQEFNLPI RYLQEFVPLG TGGGLYHFRD 101 150 ENSTTRP00000011087/1-468 XXLAGSPK-- LVLNADVCSD -PLSTMLDVH RHQPHPFLLL GTTANRTQSL ENSP00000350949/1-420 QILAGSPEAF FVLNADVCSD FPLSAMLEAH RRQRHPFLLL GTTANRTQSL ENSBTAP00000003897/1-420 QILAGSPEAF FVLNADVCSD FPLSAMLDVH RHQPHPFLLL GTTANRTQSL BACU012728/1-449 QILAGGPEAF FVLNADVCSD FPLSTMLDVH RHQPHPFLLL GTTANRTQSL bmy_13388T0/1-389 QILAGGPEAF FVLNADVCSD FPLSTMLDVH RHQPHPFLLL GTTANRTQSL 151 200 ENSTTRP00000011087/1-468 NYGCIVENPQ THEVLHYVEK PSTFVSDIIN CGIYLFSPEA LKPLRDVFQR ENSP00000350949/1-420 NYGCIVENPQ THEVLHYVEK PSTFISDIIN CGIYLFSPEA LKPLRDVFQR ENSBTAP00000003897/1-420 NYGCIVENPQ THEVLHYVEK PSTFVSDIIN CGIYLFSPEA LKPLRDVFQR BACU012728/1-449 NYGCIVENPQ THEVLHYVEK PSTFVSDIIN CGIYLFSPEA LKPLRDVFQR bmy_13388T0/1-389 NYGCIVENPQ THEVLHYVEK PSTFVSDIIN CGIYLFSPEA LKPLRDVFQR 201 250 ENSTTRP00000011087/1-468 NQQDGQLEDS SGLWPGAGTI RLEQDVFSAL AGQGQIYVHL TDGIWSQIKS ENSP00000350949/1-420 NQQDGQLEDS PGLWPGAGTI RLEQDVFSAL AGQGQIYVHL TDGIWSQIKS ENSBTAP00000003897/1-420 NQQDGQLEDS SGLWPGAGTI RLEQDVFSAL AGQGQIYVHL TDGIWSQIKS BACU012728/1-449 NQQDGQLEDS SVLWPGAGTI RLEQDVFSAL AGQGQIYVHL TDGIWSQIKS bmy_13388T0/1-389 NQQDGQLEDS SGLWPGAGTI RLEQDVFSAL AGQGQIYVHL TDGIWSQIKS 251 300 ENSTTRP00000011087/1-468 AGSALYASRL YLSQYQLTHP ERLAKHTPGG PRIRGTHPAP IPNLPPAQPS ENSP00000350949/1-420 AGSALYASRL YLSRYQDTHP ERLAKHTPGG PWIR------ ---------- ENSBTAP00000003897/1-420 AGSALYASRL YLSQYQLTHP ERLAKHTPGG PRIR------ ---------- BACU012728/1-449 AGSALYASRL YLSQYQLTHP ERLAKHTPEG PRIR------ ---------- bmy_13388T0/1-389 AGSALYASRL YLSQYQLTHP ERLAKHTPEG PRIR------ ---------- 301 350 ENSTTRP00000011087/1-468 ELLLTLDPEV KSQSLPSLNQ MWFGVFAPRS SLLLLGNVYI HPTAKVAPSA ENSP00000350949/1-420 ---------- ---------- ---------- -----GNVYI HPTAKVAPSA ENSBTAP00000003897/1-420 ---------- ---------- ---------- -----GNVYI HPTAKVAPSA BACU012728/1-449 ------DPDV KSQSLPSLNQ MWFGVFAPRS SLLLLGNVYI HPTAKVAPSA bmy_13388T0/1-389 ---------- ---------- ---------- -----GNVYI HPTAKVAPSA 351 400 ENSTTRP00000011087/1-468 VLGPNVSIGE GVTMGEGVRL RESIVLHGAT LQEHTCVLHS IVGWGSTIGR ENSP00000350949/1-420 VLGPNVSIGK GVTVGEGVRL RESIVLHGAT LQEHTCVLHS IVGWGSTVGR ENSBTAP00000003897/1-420 VLGPNVSIGE GVTIGEGVRL RESIVLHGAT LQEHTCVLHS IVGWGSTVGR BACU012728/1-449 VLGPNVSIGE GVTIGEGVRL RESIVLHGAT LQEHTCVLHS IVGWGSTVGR bmy_13388T0/1-389 V--------- ---------- ---------- --EHTCVLHS IVGWGSTVGR 401 450 ENSTTRP00000011087/1-468 WARVEGTPND PNPNDPRAHM DSESLFKDGK LLPAITILGC RVRIPAEVLI ENSP00000350949/1-420 WARVEGTPSD PNPNDPRARM DSESLFKDGK LLPAITILGC RVRIPAEVLI ENSBTAP00000003897/1-420 WARVEGTPND PNPNDPRAHM DSESLFKDGK LLPAITILGC RVRIPAEVLI BACU012728/1-449 WARVEGTPSD PNPNDPRAHM DSESLFKDGK LLPAITILGC RVRIPAEVLI bmy_13388T0/1-389 WARVEGTPSD PNPNDPRAHM DSESLFKDGK LLPAITILGC RVRIPAEVLI 451 500 ENSTTRP00000011087/1-468 LNSIVLPHKE LSRSFTNQII L ENSP00000350949/1-420 LNSIVLPHKE LSRSFTNQII L ENSBTAP00000003897/1-420 LNSIVLPHKE LSRSFTNQII L BACU012728/1-449 LNSIVLPHKE LSRSFTNQII L bmy_13388T0/1-389 LNSIVLPHKE LSRSFTNQII L