KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:26 2014 Check: 00 .. Name: ENSP00000409789/1-291 Len: 291 Check: 3435 Weight: 1.00 Name: ENSBTAP00000003905/1-267 Len: 291 Check: 1958 Weight: 1.00 Name: BACU004961/1-258 Len: 291 Check: 1817 Weight: 1.00 Name: bmy_03664T0/1-258 Len: 291 Check: 1852 Weight: 1.00 // 1 50 ENSP00000409789/1-291 MGTPWRKRKG IAGPGLPDLS CALVLQPRAQ VGTMSPAIAL AFLPLVVTLL ENSBTAP00000003905/1-267 ---------- ---------- ----LHPRAQ VGTMSPAIAL AFLPLVVTLL BACU004961/1-258 ---------- ---------- ---------- ---MSPAIAL AFLPLVVTLL bmy_03664T0/1-258 ---------- ---------- ---------- ---MSPAIAL AFLPLVVTLL 51 100 ENSP00000409789/1-291 VRYRHYFRLL VRTVLLRSLR DCLSGLRIEE RAFSYVLTHA LPGDPGHILT ENSBTAP00000003905/1-267 VRYRHYFRLL VRTVLLRSLR DCLSGLRMEE RAFSYVLTHA LPGDPGHILT BACU004961/1-258 VRYRHYFRLL VRTVLLRSLR NCLSGMRIEE RAFSYVLTHA LPGDPGHILT bmy_03664T0/1-258 VRYRHYFRLL VRTVLLRSLR DCLSGMRIEE RAFSYVLTHA LPGDPGHILT 101 150 ENSP00000409789/1-291 TLDHWSSRCE YLSHMGPVKG QILMRLVEEK APACVLELGT YCGYSTLLIA ENSBTAP00000003905/1-267 TLDHWSSHCE YLSHMGPAKG QILMRLVEEK APASALELGT YCGYSTLLIA BACU004961/1-258 TLDHWSSHCE YLSHMGPAKG QILMWLVEEK APACALELGT YCGYSTLLIA bmy_03664T0/1-258 TLDHWSSHCE YLSHMGPVKG QILMRLVEEK APACALELGT YCGYSTLLIA 151 200 ENSP00000409789/1-291 RALPPGGRLL TVERDPRTAA VAEKLIRLAG FDEHMVELIV GSSEDVIPCL ENSBTAP00000003905/1-267 RALPPGGRLL TVERDPRTAA VAEKLIRLAG FDEHTVELIV GRSEEVIPRL BACU004961/1-258 RALPPGGRLL TVERDPRTAA VAEKLIRLAG FDERTVELIV GRSEEVIPRL bmy_03664T0/1-258 RALPPGGRLL TVERDPRTAA VAEKLIRLAG FDERTVELIV GRSEEVIPRL 201 250 ENSP00000409789/1-291 RTQYQLSRAD LVLLAHRPRC YLRDLQLLEA HALLPAGATV LADHVLFPGA ENSBTAP00000003905/1-267 RTQYQLSRAD LVLLAHRPRC YLRDLQLLEG HALLPAGATV LADHVLFPGA BACU004961/1-258 RTQYQMTRAD LVLLAHRPRC YLQDLQLLEA HALLPAGATV LADHVLFPGA bmy_03664T0/1-258 RTQYQMNRAD LVLLAHRPRC YLRDLQLLEA HALLPAGATV LADHVLFPGA 251 300 ENSP00000409789/1-291 PRFLQYAKSC GRYRCRLHHT GLPDFPAIKD GIAQLTYAGP G ENSBTAP00000003905/1-267 PRFLQYAKSC GRYRCRLHHT GLPDFPAIKD GIAQLTYAGP G BACU004961/1-258 PRFLQYAKSC GRYRCRLHHT GLPDFPAIKD GIAQLTYAGP G bmy_03664T0/1-258 PRFLQYAKSC GRYRCRLHHT GLPDFPAIKD GIAQLTYAGP G