KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:29 2014 Check: 00 .. Name: ENSP00000329357/1-785 Len: 834 Check: 1927 Weight: 1.00 Name: ENSBTAP00000003929/1-786 Len: 834 Check: 6722 Weight: 1.00 Name: bmy_04681T0/1-570 Len: 834 Check: 3843 Weight: 1.00 Name: BACU008076/1-827 Len: 834 Check: 1445 Weight: 1.00 Name: ENSTTRP00000009089/1-784 Len: 834 Check: 1521 Weight: 1.00 // 1 50 ENSP00000329357/1-785 -------MSD QDHSMDEMTA VVKIEKGVGG NNGGNGNGGG AFSQARSSST ENSBTAP00000003929/1-786 -------MSD QDHSMDEMTA VVKIEKGVGG NNGGNGNGSG AFSQARSSSA bmy_04681T0/1-570 MSVIFKFFLD QDHSMDEMTA VVKIEKGVGG NNGGSGNGGG TFSQARSSST BACU008076/1-827 -------MSD QDHSMDEMTA VVKIEKGVGG NNGGNGNGGG AFSQARSSST ENSTTRP00000009089/1-784 ---------- QDHSMDEMTA VVKIEKGVGG NNGGNGNGGG AFSQARSSST 51 100 ENSP00000329357/1-785 GSSSST-GGG GQESQPSPLA LLAATCSRIE SPNENSNNSQ GPSQSGGTGE ENSBTAP00000003929/1-786 GSSSSS-GGG GQESQPSPLA LLAATCSRIE SPNENSNNSQ GPSQSGGTGE bmy_04681T0/1-570 GSSSSSGGGG GQESQPSPLA LLAATCSRIE SPNENSNNSQ GPSQSGGTGE BACU008076/1-827 GSSSSSGGGG GQESQPSPLA LLAATCSRIE SPNENSNNSQ GPSQSGGTGE ENSTTRP00000009089/1-784 GSSSSSGGGG GQESQPSPLA LLAATCSRIE SPNENSNNSQ GPSQSGGTGE 101 150 ENSP00000329357/1-785 LDLTATQLSQ GANGWQIISS SSGATPTSKE QSGSSTNGSN GSESSKNRTV ENSBTAP00000003929/1-786 LDLTATQLSQ GANGWQIISS SSGATPTSKE QSGSSTNGNN GSESSKNRTV bmy_04681T0/1-570 LDLTATQLSQ GANGWQIISS SSGATPTSKE QSGSSTNGNN GSESSKNRTV BACU008076/1-827 LDLTATQLSQ GANGWQIISS SSGATPTSKE QSGSSTNGNN GSESSKNRTV ENSTTRP00000009089/1-784 LDLTATQLSQ GANGWQIISS SSGATPTSKE QSGSSTSGNN GSESSKNRTV 151 200 ENSP00000329357/1-785 SGGQYVVAAA PNLQNQQVLT GLPGVMPNIQ YQVIPQFQTV DGQQLQFAAT ENSBTAP00000003929/1-786 SGGQYVVAAT SNLQNQQVLT GLPGVMPNIQ YQVIPQFQTV DGQQLQFAAT bmy_04681T0/1-570 SGGQYVVAAT SNLQNQQVLT GLPGVMPNIQ YQVIPQFQTV DGQQLQFAAT BACU008076/1-827 SGGQYVVAAT SNLQNQQVLT GLPGVMPNIQ YQVIPQFQTV DGQQLQFAAT ENSTTRP00000009089/1-784 SGGQYVVAAT SNLQNQQVLT GLPGVMPNIQ YQVIPQFQTV DGQQLQFAAT 201 250 ENSP00000329357/1-785 GAQVQQDGSG QIQIIPGANQ QIITNRGSGG NIIAAMPNLL QQAVPLQGLA ENSBTAP00000003929/1-786 GAQVQQDGSG QIQIIPGANQ QIITNRGSGG NIIAAMPNLL QQAVPLQGLA bmy_04681T0/1-570 GAQVQQDGSG QIQIIPGANQ QIITNRGSGG NIIAAMPNLL QQAVPLQGLA BACU008076/1-827 GAQVQQDGSG QIQIIPGANQ QIITNRGSGG NIIAAMPNLL QQAVPLQGLA ENSTTRP00000009089/1-784 GAQVQQDGSG QIQIIPGANQ QIITNRGSGG NIIAAMPNLL QQAVPLQGLA 251 300 ENSP00000329357/1-785 NNVLSGQTQY VTNVPVALNG NITLLPVNSV SAATLTPSSQ AVTISSSGSQ ENSBTAP00000003929/1-786 NNVLSGQTQY VTNVPVALNG NITLLPVNSV SAATLTPSSQ AVTISSSGSQ bmy_04681T0/1-570 NNVLSGQTQY VTNVPVALNG NITLLPVNSV SAATLTPSSQ AVTISSSGSQ BACU008076/1-827 NNVLSGQTQY VTNVPVALNG NITLLPVNSV SAATLTPSSQ AVTISSSGSQ ENSTTRP00000009089/1-784 NNVLSGQTQY VTNVPVALNG NITLLPVNSV SAATLTPSSQ AVTISSSGSQ 301 350 ENSP00000329357/1-785 ESGSQPVTSG TTISSASLVS SQASSSSFFT NANSYSTTTT TSNMGIMNFT ENSBTAP00000003929/1-786 ESGSQPVTSG TAISSASLVS SQASSSSFFT NANSYSTTTT TSNMGIMNFT bmy_04681T0/1-570 ESGSQPVTSG TAISSASLVS SQASSSSFFT NANSYSTTTT TSNMGIMNFT BACU008076/1-827 ESGSQPVTSG TAISSASLVS SQASSSSFFT NANSYSTTTT TSNMGIMNFT ENSTTRP00000009089/1-784 ESGSQPVTSG TAISSASLVS SQASSSSFFT NANSYSTTTT TSNMGIMNFT 351 400 ENSP00000329357/1-785 TSGSSGTNSQ GQTPQRVSGL QGSDALNIQQ NQTSGGSLQA GQQKEGEQNQ ENSBTAP00000003929/1-786 TSGSAGTSSQ SQTPQRVSGL QGSDTLNIQQ NQTSGGSLQA SQQKEGEQNQ bmy_04681T0/1-570 TSGSAGTNSQ SQTPQRVSGL QGSDALNIQQ NQTSGGSLQA SQQKEGEQNQ BACU008076/1-827 TSGSAGTNSQ SQTPQRVSGL QGSDALNIQQ NQTSGGSLQA SQQKEGEQNQ ENSTTRP00000009089/1-784 TSGSAGTNSQ SQTPQRVSGL QGSDALNIQQ NQTSGGSLQA SQQKEGEQNQ 401 450 ENSP00000329357/1-785 QT-QQQQILI QPQLVQGGQA LQALQAAPLS GQTFTTQAIS QETLQNLQLQ ENSBTAP00000003929/1-786 QTQQQQQILI QPQLVQGGQA LQALQAAPLS GQTFTTQAIT QETLQNLQLQ bmy_04681T0/1-570 QTQQQQQILI QPQLVQGGQA LQALQAAPLS GQTFTTQAIS QETLQNLQLQ BACU008076/1-827 QTQQQQQILI QPQLVQGGQA LQALQAAPLS GQTFTTQAIS QETLQNLQLQ ENSTTRP00000009089/1-784 QTQQQQQILI QPQLVQGGQA LQALQAAPLS GQTFTTQAIS QETLQNLQLQ 451 500 ENSP00000329357/1-785 AVPNSGPIII RTPTVGPNGQ VSWQTLQLQN LQVQNPQAQT ITLAPMQGVS ENSBTAP00000003929/1-786 AVPNSGPIII RTPTVGPNGQ VSWQTLQLQN LQVQNPQAQT ITLAPMQGVS bmy_04681T0/1-570 AVPNSGPIII RTPTVGPNGQ VSWQTLQLQN LQVQNPQAQT ITLAPMQGVS BACU008076/1-827 AVPNSGPIII RTPTVGPNGQ VSWQTLQLQN LQVQNPQAQT ITLAPMQGVS ENSTTRP00000009089/1-784 AVPNSGPIII RTPTVGPNGQ VSWQTLQLQN LQVQNPQAQT ITLAPMQGVS 501 550 ENSP00000329357/1-785 LGQTSSSNTT LTPIASAASI PAGTVTVNAA QLSSMPGLQT INLSALGTSG ENSBTAP00000003929/1-786 LGQTSSSSTT LTPIASAASI PAGTVTVNAA QLSSMPGLQT INLSALGASG bmy_04681T0/1-570 LGQTSSSSTT LTPIASAASI PAGTVTVNAA QLSSMPGLQT INLSALGASG BACU008076/1-827 LGQTSSSSTT LTPIASAASI PAGTVTVNAA QLSSMPGLQT INLSALGASG ENSTTRP00000009089/1-784 LGQTSSSSTT LTPIASAASI PAGTVTVNAA QLSSMPGLQT INLSALGASG 551 600 ENSP00000329357/1-785 IQVHPIQGLP LAIANAP--- ---------- ---------- ---------- ENSBTAP00000003929/1-786 IQVHQLPSLP LAIANAS--- ---------- ---------- ---------- bmy_04681T0/1-570 IQVHQLPSLP LAIANAS--- ---------- ---------- ---------- BACU008076/1-827 IQVHQLPSLP LAIANASVSD QGTEILQAAR RAGSVTVAHG PSCSTACGIF ENSTTRP00000009089/1-784 IQVHQLPSLP LAIANAS--- ---------- ---------- ---------- 601 650 ENSP00000329357/1-785 -------GDH GAQLGLHGAG GDGIHDDTAG GEEGENSPDA QPQAGRRTRR ENSBTAP00000003929/1-786 -------GDH GAQLGLHGAG GDGIHDDPTG GEEGENSPDP QPQAGRRTRR bmy_04681T0/1-570 ---------- ---------- ---------- ---------- ---------- BACU008076/1-827 PDQGPNPCDH GAQLGLHGAG GDGIHDDPTG GEEGENSPDP QPQAGRRTRR ENSTTRP00000009089/1-784 -------GDH GAQLGLHGAG GDGIHDDPTG GEEGENSPDP QPQAGRRTRR 651 700 ENSP00000329357/1-785 EACTCPYCKD SEGRGSGDPG KKKQHICHIQ GCGKVYGKTS HLRAHLRWHT ENSBTAP00000003929/1-786 EACTCPYCKD SEGRGSGDPG KKKQHICHMQ GCGKVYGKTS HLRAHLRWHT bmy_04681T0/1-570 ---------- ---------- ---------- ------GKA- ---------- BACU008076/1-827 EACTCPYCKD SEGRGSGDPG KKKQHICHMQ GCGKVYGKTS HLRAHLRWHT ENSTTRP00000009089/1-784 EACTCPYCKD SEGRGSGDPG KKKQHICHMQ GCGKVYGKTS HLRAHLRWHT 701 750 ENSP00000329357/1-785 GERPFMCTWS YCGKRFTRSD ELQRHKRTHT GEKKFACPEC PKRFMRSDHL ENSBTAP00000003929/1-786 GERPFMCTWS FCGKRFTRSD ELQRHKRTHT GEKKFACPEC PKRFMRSDHL bmy_04681T0/1-570 ---------- ---------- ---------- ---------- ---------- BACU008076/1-827 GERPFMCTWS YCGKRFTRSD ELQRHKRTHT GEKKFACPEC PKRFMRSDHL ENSTTRP00000009089/1-784 GERPFMCTWS YCGKRFTRSD ELQRHKRTHT GEKKFACPEC PKRFMRSDHL 751 800 ENSP00000329357/1-785 SKHIKTHQNK KGGPGVALSV GTLPLDSGAG SEGSGTATPS ALITTNMVAM ENSBTAP00000003929/1-786 SKHIKTHQNK KGGPGVALSV GTLPLDSGAG SEGSGTATPS ALITTNMVAM bmy_04681T0/1-570 ---------- ---------- ---------- ---------- ---------- BACU008076/1-827 SKHIKTHQNK KGGPGVALSV GTLPLDSGAG SEGSGTATPS ALITTNMVAM ENSTTRP00000009089/1-784 SKHIKTHQNK KGGPGVALSV GTLPLDSGAG SEGSGTSTPS ALITTNMVAM 801 850 ENSP00000329357/1-785 EAICPEGIAR LANSGINVMQ VADLQSINIS GNGF ENSBTAP00000003929/1-786 EAICPEGIAR LANSGINVMQ VADLQSINIS GNGF bmy_04681T0/1-570 ---------- ---------- ---------- ---- BACU008076/1-827 EAICPEGIAR LANSGINVMQ VADLQSINIS GNGF ENSTTRP00000009089/1-784 EAICPEGIAR LANSGINVMQ VADLQSINIS GNGF